RNA–Protein interactions for RNA: ENST00000416516.2

DCLK3-201, Transcript of doublecortin like kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DCLK3, Length 5,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3-201ENST00000416516 PHAXQ9H814 394 aaKnown RBP12.8□□□□□ -0.36
DCLK3-201ENST00000416516 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
DCLK3-201ENST00000416516 KIAA0754O94854 1291 aa12.8□□□□□ -0.36
DCLK3-201ENST00000416516 CCDC196A0A1B0GTZ2 297 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 K7ELQ4 463 aaPredicted RBP12.79□□□□□ -0.36
DCLK3-201ENST00000416516 ZSCAN29Q8IWY8 852 aaPredicted RBP12.79□□□□□ -0.36
DCLK3-201ENST00000416516 RPAP2Q8IXW5 612 aaPredicted RBP12.79□□□□□ -0.36
DCLK3-201ENST00000416516 ZHX3Q9H4I2 956 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 TDO2P48775 406 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 NUTM2GQ5VZR2 741 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 CEP57L1Q8IYX8 460 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 TAF4BQ92750 862 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 EHMT1Q9H9B1 1298 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 ME1P48163 572 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
DCLK3-201ENST00000416516 INCENPQ9NQS7 918 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 ARHGAP5Q13017 1502 aa12.79□□□□□ -0.36
DCLK3-201ENST00000416516 SLFN5Q08AF3 891 aa12.78□□□□□ -0.36
DCLK3-201ENST00000416516 RAB34Q9BZG1 259 aa12.78□□□□□ -0.36
DCLK3-201ENST00000416516 TNMDQ9H2S6 317 aa12.78□□□□□ -0.36
DCLK3-201ENST00000416516 MVPQ14764 893 aaKnown RBP12.78□□□□□ -0.36
DCLK3-201ENST00000416516 HSP90AB3PQ58FF7 597 aa12.78□□□□□ -0.36
DCLK3-201ENST00000416516 ZNF397Q8NF99 534 aaPredicted RBP12.78□□□□□ -0.36
DCLK3-201ENST00000416516 TOP2BQ02880 1626 aa12.78□□□□□ -0.36
DCLK3-201ENST00000416516 EFCAB5A4FU69 1503 aa12.78□□□□□ -0.36
DCLK3-201ENST00000416516 ANKRD30BQ9BXX2 1392 aa12.78□□□□□ -0.36
DCLK3-201ENST00000416516 FGFR1OPO95684 399 aaKnown RBP12.78□□□□□ -0.36
DCLK3-201ENST00000416516 PPP1R1BQ9UD71 204 aaPredicted RBP12.78□□□□□ -0.36
DCLK3-201ENST00000416516 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
DCLK3-201ENST00000416516 ANKRD62A6NC57 917 aa12.77□□□□□ -0.36
DCLK3-201ENST00000416516 USP8P40818 1118 aa12.77□□□□□ -0.36
DCLK3-201ENST00000416516 TTLL5Q6EMB2 1281 aa12.77□□□□□ -0.36
DCLK3-201ENST00000416516 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.36
DCLK3-201ENST00000416516 PRAM1Q96QH2 718 aa12.77□□□□□ -0.36
DCLK3-201ENST00000416516 TSR2Q969E8 191 aaKnown RBP12.77□□□□□ -0.36
DCLK3-201ENST00000416516 RTEL1-TNFRSF6BF6WH68 1400 aa12.77□□□□□ -0.37
DCLK3-201ENST00000416516 KIF2AO00139 706 aaPredicted RBP12.77□□□□□ -0.37
DCLK3-201ENST00000416516 IMMTQ16891 758 aaKnown RBP12.77□□□□□ -0.37
DCLK3-201ENST00000416516 GBP3Q9H0R5 595 aa12.77□□□□□ -0.37
DCLK3-201ENST00000416516 CCDC91Q7Z6B0 441 aa12.77□□□□□ -0.37
DCLK3-201ENST00000416516 VPS36Q86VN1 386 aa12.77□□□□□ -0.37
DCLK3-201ENST00000416516 FMNL2Q96PY5 1086 aa12.77□□□□□ -0.37
DCLK3-201ENST00000416516 RAI14Q9P0K7 980 aa12.77□□□□□ -0.37
DCLK3-201ENST00000416516 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
DCLK3-201ENST00000416516 NOB1Q9ULX3 412 aaKnown RBP12.76□□□□□ -0.37
DCLK3-201ENST00000416516 NCOA1Q15788 1441 aa12.76□□□□□ -0.37
DCLK3-201ENST00000416516 LARP1BQ659C4 914 aaKnown RBP12.76□□□□□ -0.37
DCLK3-201ENST00000416516 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
DCLK3-201ENST00000416516 NUP133Q8WUM0 1156 aa12.76□□□□□ -0.37
DCLK3-201ENST00000416516 LRP2BPQ9P2M1 347 aa12.76□□□□□ -0.37
DCLK3-201ENST00000416516 DAPK1P53355 1430 aa12.76□□□□□ -0.37
DCLK3-201ENST00000416516 IFIT1P09914 478 aaKnown RBP12.76□□□□□ -0.37
DCLK3-201ENST00000416516 ENOX2Q16206 610 aaKnown RBP12.76□□□□□ -0.37
DCLK3-201ENST00000416516 CAVIN4Q5BKX8 364 aa12.76□□□□□ -0.37
DCLK3-201ENST00000416516 TMEM132EQ6IEE7 984 aa12.76□□□□□ -0.37
DCLK3-201ENST00000416516 ZSCAN30Q86W11 494 aa12.76□□□□□ -0.37
DCLK3-201ENST00000416516 C1orf115Q9H7X2 142 aa12.76□□□□□ -0.37
DCLK3-201ENST00000416516 SEC63Q9UGP8 760 aaKnown RBP12.76□□□□□ -0.37
DCLK3-201ENST00000416516 FIBPO43427 364 aa12.75□□□□□ -0.37
DCLK3-201ENST00000416516 FCHSD2O94868 740 aa12.75□□□□□ -0.37
DCLK3-201ENST00000416516 DDX54Q8TDD1 881 aaKnown RBP12.75□□□□□ -0.37
DCLK3-201ENST00000416516 CFAP70Q5T0N1 1121 aa12.75□□□□□ -0.37
DCLK3-201ENST00000416516 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
DCLK3-201ENST00000416516 UQCRHLA0A096LP55 91 aa12.75□□□□□ -0.37
DCLK3-201ENST00000416516 UQCRHP07919 91 aa12.75□□□□□ -0.37
DCLK3-201ENST00000416516 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
DCLK3-201ENST00000416516 GRIN2BQ13224 1484 aa12.75□□□□□ -0.37
DCLK3-201ENST00000416516 RAB11FIP3O75154 756 aa12.75□□□□□ -0.37
DCLK3-201ENST00000416516 EPB41L2O43491 1005 aaKnown RBP12.74□□□□□ -0.37
DCLK3-201ENST00000416516 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
DCLK3-201ENST00000416516 MATR3P43243 847 aaKnown RBP eCLIP12.74□□□□□ -0.37
DCLK3-201ENST00000416516 TSG101Q99816 390 aa12.74□□□□□ -0.37
DCLK3-201ENST00000416516 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
DCLK3-201ENST00000416516 CCDC150Q8NCX0 1101 aa12.74□□□□□ -0.37
DCLK3-201ENST00000416516 ERBINQ96RT1 1412 aa12.74□□□□□ -0.37
DCLK3-201ENST00000416516 SSBP05455 408 aaKnown RBP eCLIP12.74□□□□□ -0.37
DCLK3-201ENST00000416516 MCM3P25205 808 aa12.73□□□□□ -0.37
DCLK3-201ENST00000416516 TRAF1Q13077 416 aa12.73□□□□□ -0.37
DCLK3-201ENST00000416516 AMOTQ4VCS5 1084 aa12.73□□□□□ -0.37
DCLK3-201ENST00000416516 HMGB1P09429 215 aaKnown RBP12.73□□□□□ -0.37
DCLK3-201ENST00000416516 AACSQ86V21 672 aa12.73□□□□□ -0.37
DCLK3-201ENST00000416516 CHD1LQ86WJ1 897 aa12.73□□□□□ -0.37
DCLK3-201ENST00000416516 CUL5Q93034 780 aa12.73□□□□□ -0.37
DCLK3-201ENST00000416516 RNF41Q9H4P4 317 aaPredicted RBP12.73□□□□□ -0.37
DCLK3-201ENST00000416516 PDRG1Q9NUG6 133 aa12.73□□□□□ -0.37
DCLK3-201ENST00000416516 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
DCLK3-201ENST00000416516 EIF5P55010 431 aaKnown RBP12.73□□□□□ -0.37
DCLK3-201ENST00000416516 FEZ1Q99689 392 aa12.73□□□□□ -0.37
DCLK3-201ENST00000416516 PYM1Q9BRP8 204 aaKnown RBP12.73□□□□□ -0.37
DCLK3-201ENST00000416516 FKBP4Q02790 459 aaKnown RBP eCLIP12.72□□□□□ -0.37
DCLK3-201ENST00000416516 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
DCLK3-201ENST00000416516 CCDC148Q8NFR7 591 aa12.72□□□□□ -0.37
DCLK3-201ENST00000416516 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
DCLK3-201ENST00000416516 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
DCLK3-201ENST00000416516 STAMBPO95630 424 aa12.72□□□□□ -0.37
DCLK3-201ENST00000416516 SPATA32Q96LK8 384 aa12.72□□□□□ -0.37
DCLK3-201ENST00000416516 SRGAP3O43295 1099 aa12.72□□□□□ -0.37
DCLK3-201ENST00000416516 ZPR1O75312 459 aa12.72□□□□□ -0.37
DCLK3-201ENST00000416516 FKBP15Q5T1M5 1219 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms