RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 MAP2P11137 1827 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-206ENST00000416004 RAPGEF4Q8WZA2 1011 aa12.33□□□□□ -0.44
CHRNA1-206ENST00000416004 BCL11BQ9C0K0 894 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-206ENST00000416004 PEAK1Q9H792 1746 aa12.32□□□□□ -0.44
CHRNA1-206ENST00000416004 FBLN1P23142 703 aa12.31□□□□□ -0.44
CHRNA1-206ENST00000416004 EZH2Q15910 746 aaKnown RBP12.31□□□□□ -0.44
CHRNA1-206ENST00000416004 MARCH10Q8NA82 808 aaPredicted RBP12.31□□□□□ -0.44
CHRNA1-206ENST00000416004 INSRP06213 1382 aa12.31□□□□□ -0.44
CHRNA1-206ENST00000416004 RGPD3A6NKT7 1758 aaPredicted RBP12.31□□□□□ -0.44
CHRNA1-206ENST00000416004 RGPD2P0DJD1 1756 aa12.31□□□□□ -0.44
CHRNA1-206ENST00000416004 RGPD4Q7Z3J3 1758 aa12.31□□□□□ -0.44
CHRNA1-206ENST00000416004 BCL9O00512 1426 aa12.31□□□□□ -0.44
CHRNA1-206ENST00000416004 MTHFSP49914 203 aa12.31□□□□□ -0.44
CHRNA1-206ENST00000416004 HNRNPUQ00839 825 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHRNA1-206ENST00000416004 TATP17735 454 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-206ENST00000416004 DDX54Q8TDD1 881 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-206ENST00000416004 CAMKK2Q96RR4 588 aa12.29□□□□□ -0.44
CHRNA1-206ENST00000416004 SENP3-EIF4A1A0A087X0R7 540 aa12.29□□□□□ -0.44
CHRNA1-206ENST00000416004 PLSCR1O15162 318 aa12.29□□□□□ -0.44
CHRNA1-206ENST00000416004 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
CHRNA1-206ENST00000416004 RREB1Q92766 1687 aa12.28□□□□□ -0.44
CHRNA1-206ENST00000416004 ZCRB1Q8TBF4 217 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-206ENST00000416004 EMILIN1Q9Y6C2 1016 aa12.28□□□□□ -0.44
CHRNA1-206ENST00000416004 NHSQ6T4R5 1651 aa12.28□□□□□ -0.44
CHRNA1-206ENST00000416004 ADAMTS8Q9UP79 889 aa12.27□□□□□ -0.45
CHRNA1-206ENST00000416004 NUP188Q5SRE5 1749 aa12.26□□□□□ -0.45
CHRNA1-206ENST00000416004 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-206ENST00000416004 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
CHRNA1-206ENST00000416004 ACSBG1Q96GR2 724 aa12.26□□□□□ -0.45
CHRNA1-206ENST00000416004 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
CHRNA1-206ENST00000416004 HMGB2P26583 209 aaKnown RBP12.25□□□□□ -0.45
CHRNA1-206ENST00000416004 R3HDM1Q15032 1099 aaKnown RBP12.25□□□□□ -0.45
CHRNA1-206ENST00000416004 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
CHRNA1-206ENST00000416004 SYTL4Q96C24 671 aaPredicted RBP12.25□□□□□ -0.45
CHRNA1-206ENST00000416004 BCL11AQ9H165 835 aa12.25□□□□□ -0.45
CHRNA1-206ENST00000416004 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
CHRNA1-206ENST00000416004 PCDH11XQ9BZA7 1347 aa12.25□□□□□ -0.45
CHRNA1-206ENST00000416004 PCDH11YQ9BZA8 1340 aa12.25□□□□□ -0.45
CHRNA1-206ENST00000416004 SPG7Q9UQ90 795 aa12.25□□□□□ -0.45
CHRNA1-206ENST00000416004 COL3A1P02461 1466 aaPredicted RBP12.24□□□□□ -0.45
CHRNA1-206ENST00000416004 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHRNA1-206ENST00000416004 BTAF1O14981 1849 aa12.23□□□□□ -0.45
CHRNA1-206ENST00000416004 MEGF6O75095 1541 aa12.23□□□□□ -0.45
CHRNA1-206ENST00000416004 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
CHRNA1-206ENST00000416004 STK32BQ9NY57 414 aa12.23□□□□□ -0.45
CHRNA1-206ENST00000416004 DOT1LQ8TEK3 1739 aa12.22□□□□□ -0.45
CHRNA1-206ENST00000416004 ZBED9Q6R2W3 1325 aa12.22□□□□□ -0.45
CHRNA1-206ENST00000416004 KCNQ2O43526 872 aa12.21□□□□□ -0.45
CHRNA1-206ENST00000416004 TXNRD1Q16881 649 aa12.21□□□□□ -0.45
CHRNA1-206ENST00000416004 LRP5O75197 1615 aa12.21□□□□□ -0.45
CHRNA1-206ENST00000416004 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
CHRNA1-206ENST00000416004 CCDC146Q8IYE0 955 aa12.2□□□□□ -0.46
CHRNA1-206ENST00000416004 EYA1Q99502 592 aa12.2□□□□□ -0.46
CHRNA1-206ENST00000416004 ANP32EQ9BTT0 268 aa12.2□□□□□ -0.46
CHRNA1-206ENST00000416004 PKD1L3Q7Z443 1732 aa12.19□□□□□ -0.46
CHRNA1-206ENST00000416004 PRIM1P49642 420 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-206ENST00000416004 EIF4A2Q14240 407 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-206ENST00000416004 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
CHRNA1-206ENST00000416004 SLC27A3Q5K4L6 730 aa12.19□□□□□ -0.46
CHRNA1-206ENST00000416004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
CHRNA1-206ENST00000416004 SALL2Q9Y467 1007 aaPredicted RBP12.19□□□□□ -0.46
CHRNA1-206ENST00000416004 DIAPH1O60610 1272 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-206ENST00000416004 PTF1AQ7RTS3 328 aa12.18□□□□□ -0.46
CHRNA1-206ENST00000416004 U2SURPO15042 1029 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-206ENST00000416004 U2AF1L5P0DN76 240 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-206ENST00000416004 U2AF1Q01081 240 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHRNA1-206ENST00000416004 PLEKHO1Q53GL0 409 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-206ENST00000416004 IFNL2Q8IZJ0 200 aa12.17□□□□□ -0.46
CHRNA1-206ENST00000416004 SPON1Q9HCB6 807 aa12.17□□□□□ -0.46
CHRNA1-206ENST00000416004 PPP1R1BQ9UD71 204 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-206ENST00000416004 HSP90AB1P08238 724 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-206ENST00000416004 AMOTQ4VCS5 1084 aa12.17□□□□□ -0.46
CHRNA1-206ENST00000416004 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
CHRNA1-206ENST00000416004 IL13P35225 146 aa12.16□□□□□ -0.46
CHRNA1-206ENST00000416004 SLC15A2Q16348 729 aa12.16□□□□□ -0.46
CHRNA1-206ENST00000416004 SMARCC1Q92922 1105 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-206ENST00000416004 IGSF1Q8N6C5 1336 aa12.16□□□□□ -0.46
CHRNA1-206ENST00000416004 APAF1O14727 1248 aa12.15□□□□□ -0.46
CHRNA1-206ENST00000416004 C1orf141Q5JVX7 400 aa12.15□□□□□ -0.46
CHRNA1-206ENST00000416004 MPRIPQ6WCQ1 1025 aa12.15□□□□□ -0.46
CHRNA1-206ENST00000416004 NUDCQ9Y266 331 aa12.15□□□□□ -0.46
CHRNA1-206ENST00000416004 ITGB4P16144 1822 aa12.15□□□□□ -0.46
CHRNA1-206ENST00000416004 DCAF8L1A6NGE4 600 aa12.14□□□□□ -0.47
CHRNA1-206ENST00000416004 LY75O60449 1722 aa12.14□□□□□ -0.47
CHRNA1-206ENST00000416004 PROM2Q8N271 834 aa12.14□□□□□ -0.47
CHRNA1-206ENST00000416004 TMOD3Q9NYL9 352 aa12.14□□□□□ -0.47
CHRNA1-206ENST00000416004 CCNL1Q9UK58 526 aaPredicted RBP12.14□□□□□ -0.47
CHRNA1-206ENST00000416004 CYP27B1O15528 508 aa12.13□□□□□ -0.47
CHRNA1-206ENST00000416004 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
CHRNA1-206ENST00000416004 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-206ENST00000416004 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
CHRNA1-206ENST00000416004 PLEKHF1Q96S99 279 aa12.12□□□□□ -0.47
CHRNA1-206ENST00000416004 TFCP2L1Q9NZI6 479 aa12.12□□□□□ -0.47
CHRNA1-206ENST00000416004 PHKG2P15735 406 aa12.12□□□□□ -0.47
CHRNA1-206ENST00000416004 ZNF530Q6P9A1 599 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-206ENST00000416004 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-206ENST00000416004 RRP7AQ9Y3A4 280 aaKnown RBP12.12□□□□□ -0.47
CHRNA1-206ENST00000416004 HMOX1P09601 288 aa12.11□□□□□ -0.47
CHRNA1-206ENST00000416004 DCAF5Q96JK2 942 aa12.11□□□□□ -0.47
CHRNA1-206ENST00000416004 RSPH6AQ9H0K4 717 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms