RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 ADH1CP00326 375 aa9.42□□□□□ -0.9
CSTF1-202ENST00000415828 TRIM47Q96LD4 638 aa9.42□□□□□ -0.9
CSTF1-202ENST00000415828 CDK15Q96Q40 435 aa9.42□□□□□ -0.9
CSTF1-202ENST00000415828 SETD1BQ9UPS6 1966 aaKnown RBP9.42□□□□□ -0.9
CSTF1-202ENST00000415828 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
CSTF1-202ENST00000415828 CD109Q6YHK3 1445 aa9.41□□□□□ -0.9
CSTF1-202ENST00000415828 MAGEB6P1A0A0J9YX57 407 aa9.41□□□□□ -0.9
CSTF1-202ENST00000415828 TMEM132AQ24JP5 1023 aa9.41□□□□□ -0.9
CSTF1-202ENST00000415828 SH3RF1Q7Z6J0 888 aa9.41□□□□□ -0.9
CSTF1-202ENST00000415828 KDM5BQ9UGL1 1544 aa9.41□□□□□ -0.9
CSTF1-202ENST00000415828 UHRF1BP1LA0JNW5 1464 aa9.4□□□□□ -0.9
CSTF1-202ENST00000415828 NR6A1Q15406 480 aa9.4□□□□□ -0.9
CSTF1-202ENST00000415828 TRIM46Q7Z4K8 759 aa9.4□□□□□ -0.9
CSTF1-202ENST00000415828 WDR4P57081 412 aaKnown RBP9.39□□□□□ -0.91
CSTF1-202ENST00000415828 SH3BP5LQ7L8J4 393 aa9.39□□□□□ -0.91
CSTF1-202ENST00000415828 KIFC2Q96AC6 838 aa9.39□□□□□ -0.91
CSTF1-202ENST00000415828 CARD14Q9BXL6 1004 aa9.39□□□□□ -0.91
CSTF1-202ENST00000415828 NR3C2P08235 984 aa9.38□□□□□ -0.91
CSTF1-202ENST00000415828 TIMP2P16035 220 aa9.38□□□□□ -0.91
CSTF1-202ENST00000415828 C1QTNF2Q9BXJ5 285 aa9.38□□□□□ -0.91
CSTF1-202ENST00000415828 WDR7Q9Y4E6 1490 aa9.38□□□□□ -0.91
CSTF1-202ENST00000415828 RAPGEF3O95398 923 aa9.37□□□□□ -0.91
CSTF1-202ENST00000415828 GRM5P41594 1212 aa9.37□□□□□ -0.91
CSTF1-202ENST00000415828 PIP4K2BP78356 416 aa9.37□□□□□ -0.91
CSTF1-202ENST00000415828 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
CSTF1-202ENST00000415828 GPKOWQ92917 476 aaPredicted RBP eCLIP9.37□□□□□ -0.91
CSTF1-202ENST00000415828 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
CSTF1-202ENST00000415828 ARHGEF40Q8TER5 1519 aa9.36□□□□□ -0.91
CSTF1-202ENST00000415828 USP17L8P0C7I0 530 aa9.36□□□□□ -0.91
CSTF1-202ENST00000415828 NR5A1Q13285 461 aa9.36□□□□□ -0.91
CSTF1-202ENST00000415828 TMEM259Q4ZIN3 620 aa9.36□□□□□ -0.91
CSTF1-202ENST00000415828 KLF16Q9BXK1 252 aaPredicted RBP9.36□□□□□ -0.91
CSTF1-202ENST00000415828 ZIC2O95409 532 aaPredicted RBP9.35□□□□□ -0.91
CSTF1-202ENST00000415828 POTEAQ6S8J7 498 aa9.35□□□□□ -0.91
CSTF1-202ENST00000415828 VASH1Q7L8A9 365 aaPredicted RBP9.35□□□□□ -0.91
CSTF1-202ENST00000415828 EPS8L1Q8TE68 723 aa9.35□□□□□ -0.91
CSTF1-202ENST00000415828 UACAQ9BZF9 1416 aa9.35□□□□□ -0.91
CSTF1-202ENST00000415828 ZFAND3Q9H8U3 227 aa9.35□□□□□ -0.91
CSTF1-202ENST00000415828 HMX1Q9NP08 348 aaPredicted RBP9.35□□□□□ -0.91
CSTF1-202ENST00000415828 ZNF335Q9H4Z2 1342 aaPredicted RBP9.34□□□□□ -0.91
CSTF1-202ENST00000415828 FSHRP23945 695 aa9.34□□□□□ -0.91
CSTF1-202ENST00000415828 ERFEQ4G0M1 354 aa9.34□□□□□ -0.91
CSTF1-202ENST00000415828 PDXDC2PQ6P474 469 aa9.34□□□□□ -0.91
CSTF1-202ENST00000415828 TRMT44Q8IYL2 757 aaKnown RBP9.34□□□□□ -0.91
CSTF1-202ENST00000415828 ITPKCQ96DU7 683 aa9.34□□□□□ -0.91
CSTF1-202ENST00000415828 ZFP42Q96MM3 310 aa9.34□□□□□ -0.91
CSTF1-202ENST00000415828 ARHGAP9Q9BRR9 750 aa9.34□□□□□ -0.91
CSTF1-202ENST00000415828 RICTORQ6R327 1708 aa9.34□□□□□ -0.92
CSTF1-202ENST00000415828 CEBPAP49715 358 aaPredicted RBP9.33□□□□□ -0.92
CSTF1-202ENST00000415828 LCE2AQ5TA79 106 aaPredicted RBP9.33□□□□□ -0.92
CSTF1-202ENST00000415828 MRPL14Q6P1L8 145 aaKnown RBP9.33□□□□□ -0.92
CSTF1-202ENST00000415828 MAP4K5Q9Y4K4 846 aa9.33□□□□□ -0.92
CSTF1-202ENST00000415828 ALKQ9UM73 1620 aa9.33□□□□□ -0.92
CSTF1-202ENST00000415828 TNIKQ9UKE5 1360 aa9.33□□□□□ -0.92
CSTF1-202ENST00000415828 PURBQ96QR8 312 aaKnown RBP9.32□□□□□ -0.92
CSTF1-202ENST00000415828 WFS1O76024 890 aa9.31□□□□□ -0.92
CSTF1-202ENST00000415828 NFX1Q12986 1120 aaKnown RBP9.31□□□□□ -0.92
CSTF1-202ENST00000415828 ZBTB33Q86T24 672 aa9.31□□□□□ -0.92
CSTF1-202ENST00000415828 ZC3H4Q9UPT8 1303 aaKnown RBP9.31□□□□□ -0.92
CSTF1-202ENST00000415828 TERTO14746 1132 aaKnown RBP9.3□□□□□ -0.92
CSTF1-202ENST00000415828 SCARF1Q14162 830 aa9.3□□□□□ -0.92
CSTF1-202ENST00000415828 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
CSTF1-202ENST00000415828 PTK2Q05397 1052 aa9.29□□□□□ -0.92
CSTF1-202ENST00000415828 MLECQ14165 292 aa9.29□□□□□ -0.92
CSTF1-202ENST00000415828 SNRKQ9NRH2 765 aa9.29□□□□□ -0.92
CSTF1-202ENST00000415828 UHRF1BP1Q6BDS2 1440 aa9.29□□□□□ -0.92
CSTF1-202ENST00000415828 C3P01024 1663 aa9.29□□□□□ -0.92
CSTF1-202ENST00000415828 KIAA0556O60303 1618 aa9.28□□□□□ -0.92
CSTF1-202ENST00000415828 CCDC116Q8IYX3 515 aa9.28□□□□□ -0.92
CSTF1-202ENST00000415828 BANK1Q8NDB2 785 aa9.28□□□□□ -0.92
CSTF1-202ENST00000415828 SLC10A4Q96EP9 437 aa9.28□□□□□ -0.92
CSTF1-202ENST00000415828 SUPT6HQ7KZ85 1726 aaKnown RBP9.28□□□□□ -0.92
CSTF1-202ENST00000415828 C6orf118Q5T5N4 469 aa9.27□□□□□ -0.93
CSTF1-202ENST00000415828 PNMA1Q8ND90 353 aa9.27□□□□□ -0.93
CSTF1-202ENST00000415828 NCOA1Q15788 1441 aa9.27□□□□□ -0.93
CSTF1-202ENST00000415828 FANCAO15360 1455 aa9.27□□□□□ -0.93
CSTF1-202ENST00000415828 ADAM32Q8TC27 787 aa9.26□□□□□ -0.93
CSTF1-202ENST00000415828 KCTD15Q96SI1 283 aaPredicted RBP9.26□□□□□ -0.93
CSTF1-202ENST00000415828 GPSM3Q9Y4H4 160 aa9.26□□□□□ -0.93
CSTF1-202ENST00000415828 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
CSTF1-202ENST00000415828 WRNQ14191 1432 aaPredicted RBP eCLIP9.25□□□□□ -0.93
CSTF1-202ENST00000415828 BIVM-ERCC5R4GMW8 1640 aa9.25□□□□□ -0.93
CSTF1-202ENST00000415828 SOBPA7XYQ1 873 aa9.25□□□□□ -0.93
CSTF1-202ENST00000415828 LCE2CQ5TA81 110 aa9.25□□□□□ -0.93
CSTF1-202ENST00000415828 MEIOBQ8N635 442 aa9.25□□□□□ -0.93
CSTF1-202ENST00000415828 TRIM34Q9BYJ4 488 aa9.25□□□□□ -0.93
CSTF1-202ENST00000415828 NXF1Q9UBU9 619 aaKnown RBP9.25□□□□□ -0.93
CSTF1-202ENST00000415828 ARHGEF12Q9NZN5 1544 aa9.25□□□□□ -0.93
CSTF1-202ENST00000415828 CAMSAP1Q5T5Y3 1602 aa9.24□□□□□ -0.93
CSTF1-202ENST00000415828 PPP1R26Q5T8A7 1209 aaPredicted RBP9.24□□□□□ -0.93
CSTF1-202ENST00000415828 LINC00528Q8N1L1 170 aa9.24□□□□□ -0.93
CSTF1-202ENST00000415828 MTMR14Q8NCE2 650 aa9.24□□□□□ -0.93
CSTF1-202ENST00000415828 CDV3Q9UKY7 258 aaKnown RBP9.24□□□□□ -0.93
CSTF1-202ENST00000415828 POGZQ7Z3K3 1410 aa9.23□□□□□ -0.93
CSTF1-202ENST00000415828 DISP1Q96F81 1524 aa9.23□□□□□ -0.93
CSTF1-202ENST00000415828 UPP2O95045 317 aa9.23□□□□□ -0.93
CSTF1-202ENST00000415828 BMP2P12643 396 aa9.23□□□□□ -0.93
CSTF1-202ENST00000415828 VEGFBP49765 207 aa9.23□□□□□ -0.93
CSTF1-202ENST00000415828 ABCA9Q8IUA7 1624 aa9.23□□□□□ -0.93
CSTF1-202ENST00000415828 CARMIL2Q6F5E8 1435 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms