RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 ZNF598Q86UK7 904 aaKnown RBP9.84□□□□□ -0.83
EPHA4-204ENST00000415749 RNF135Q8IUD6 432 aa9.84□□□□□ -0.83
EPHA4-204ENST00000415749 UCN2Q96RP3 112 aa9.84□□□□□ -0.83
EPHA4-204ENST00000415749 MAP4K5Q9Y4K4 846 aa9.84□□□□□ -0.83
EPHA4-204ENST00000415749 PALM3A6NDB9 673 aaPredicted RBP9.83□□□□□ -0.84
EPHA4-204ENST00000415749 ATP9BO43861 1147 aa9.83□□□□□ -0.84
EPHA4-204ENST00000415749 ZNF697Q5TEC3 545 aa9.83□□□□□ -0.84
EPHA4-204ENST00000415749 PRKD2Q9BZL6 878 aa9.83□□□□□ -0.84
EPHA4-204ENST00000415749 TFIP11Q9UBB9 837 aaKnown RBP9.83□□□□□ -0.84
EPHA4-204ENST00000415749 ASXL2Q76L83 1435 aa9.82□□□□□ -0.84
EPHA4-204ENST00000415749 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
EPHA4-204ENST00000415749 SKIP12755 728 aa9.82□□□□□ -0.84
EPHA4-204ENST00000415749 VASH1Q7L8A9 365 aaPredicted RBP9.82□□□□□ -0.84
EPHA4-204ENST00000415749 SEPT12Q8IYM1 358 aa9.82□□□□□ -0.84
EPHA4-204ENST00000415749 MPNDQ8N594 471 aa9.82□□□□□ -0.84
EPHA4-204ENST00000415749 TRIM52Q96A61 297 aa9.82□□□□□ -0.84
EPHA4-204ENST00000415749 PLB1Q6P1J6 1458 aa9.82□□□□□ -0.84
EPHA4-204ENST00000415749 MAP7D1Q3KQU3 841 aa9.81□□□□□ -0.84
EPHA4-204ENST00000415749 LZTS3O60299 673 aaPredicted RBP9.8□□□□□ -0.84
EPHA4-204ENST00000415749 PPP1R15AO75807 674 aaPredicted RBP9.8□□□□□ -0.84
EPHA4-204ENST00000415749 LMOD1P29536 600 aaPredicted RBP9.8□□□□□ -0.84
EPHA4-204ENST00000415749 ARID5BQ14865 1188 aa9.8□□□□□ -0.84
EPHA4-204ENST00000415749 CFAP70Q5T0N1 1121 aa9.8□□□□□ -0.84
EPHA4-204ENST00000415749 TBC1D9Q6ZT07 1266 aa9.8□□□□□ -0.84
EPHA4-204ENST00000415749 CDK15Q96Q40 435 aa9.8□□□□□ -0.84
EPHA4-204ENST00000415749 KCTD15Q96SI1 283 aaPredicted RBP9.8□□□□□ -0.84
EPHA4-204ENST00000415749 MAFBQ9Y5Q3 323 aaPredicted RBP9.8□□□□□ -0.84
EPHA4-204ENST00000415749 RUSC2Q8N2Y8 1516 aa9.8□□□□□ -0.84
EPHA4-204ENST00000415749 GLI2P10070 1586 aa9.8□□□□□ -0.84
EPHA4-204ENST00000415749 TOP2BQ02880 1626 aa9.79□□□□□ -0.84
EPHA4-204ENST00000415749 ESPNB1AK53 854 aa9.79□□□□□ -0.84
EPHA4-204ENST00000415749 PIK3CDO00329 1044 aa9.79□□□□□ -0.84
EPHA4-204ENST00000415749 GIGYF1O75420 1035 aaPredicted RBP9.79□□□□□ -0.84
EPHA4-204ENST00000415749 PHTF2Q8N3S3 785 aa9.79□□□□□ -0.84
EPHA4-204ENST00000415749 MRGPRX2Q96LB1 330 aa9.79□□□□□ -0.84
EPHA4-204ENST00000415749 ABCC2Q92887 1545 aa9.78□□□□□ -0.84
EPHA4-204ENST00000415749 USP17L5A8MUK1 530 aa9.78□□□□□ -0.84
EPHA4-204ENST00000415749 RGS20O76081 388 aa9.78□□□□□ -0.84
EPHA4-204ENST00000415749 RFX1P22670 979 aa9.78□□□□□ -0.84
EPHA4-204ENST00000415749 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
EPHA4-204ENST00000415749 PLPP7Q8NBV4 271 aa9.78□□□□□ -0.84
EPHA4-204ENST00000415749 PBXIP1Q96AQ6 731 aa9.78□□□□□ -0.84
EPHA4-204ENST00000415749 PPRC1Q5VV67 1664 aaKnown RBP9.77□□□□□ -0.84
EPHA4-204ENST00000415749 TNIKQ9UKE5 1360 aa9.77□□□□□ -0.84
EPHA4-204ENST00000415749 CHIC2Q9UKJ5 165 aa9.77□□□□□ -0.85
EPHA4-204ENST00000415749 DOLKQ9UPQ8 538 aa9.77□□□□□ -0.85
EPHA4-204ENST00000415749 TLL2Q9Y6L7 1015 aa9.77□□□□□ -0.85
EPHA4-204ENST00000415749 BIVM-ERCC5R4GMW8 1640 aa9.77□□□□□ -0.85
EPHA4-204ENST00000415749 IGF1RP08069 1367 aa9.76□□□□□ -0.85
EPHA4-204ENST00000415749 USP17L3A6NCW0 530 aa9.76□□□□□ -0.85
EPHA4-204ENST00000415749 USP17L4A6NCW7 530 aa9.76□□□□□ -0.85
EPHA4-204ENST00000415749 SIAH2O43255 324 aa9.76□□□□□ -0.85
EPHA4-204ENST00000415749 DHX9Q08211 1270 aaKnown RBP9.76□□□□□ -0.85
EPHA4-204ENST00000415749 FOXC1Q12948 553 aa9.76□□□□□ -0.85
EPHA4-204ENST00000415749 EML3Q32P44 896 aa9.76□□□□□ -0.85
EPHA4-204ENST00000415749 USP17L2Q6R6M4 530 aa9.76□□□□□ -0.85
EPHA4-204ENST00000415749 USP17L1Q7RTZ2 530 aa9.76□□□□□ -0.85
EPHA4-204ENST00000415749 TEX14Q8IWB6 1497 aa9.76□□□□□ -0.85
EPHA4-204ENST00000415749 LMTK3Q96Q04 1460 aa9.76□□□□□ -0.85
EPHA4-204ENST00000415749 ACIN1Q9UKV3 1341 aaKnown RBP9.76□□□□□ -0.85
EPHA4-204ENST00000415749 CARMIL2Q6F5E8 1435 aa9.75□□□□□ -0.85
EPHA4-204ENST00000415749 ADH1CP00326 375 aa9.75□□□□□ -0.85
EPHA4-204ENST00000415749 FSHRP23945 695 aa9.75□□□□□ -0.85
EPHA4-204ENST00000415749 NR5A1Q13285 461 aa9.75□□□□□ -0.85
EPHA4-204ENST00000415749 RETREG2Q8NC44 543 aa9.75□□□□□ -0.85
EPHA4-204ENST00000415749 SIRT1Q96EB6 747 aa9.75□□□□□ -0.85
EPHA4-204ENST00000415749 EPRSP07814 1512 aaKnown RBP9.74□□□□□ -0.85
EPHA4-204ENST00000415749 RAB15P59190 212 aa9.74□□□□□ -0.85
EPHA4-204ENST00000415749 INTS6LQ5JSJ4 861 aaKnown RBP9.74□□□□□ -0.85
EPHA4-204ENST00000415749 TMCO4Q5TGY1 634 aa9.74□□□□□ -0.85
EPHA4-204ENST00000415749 SNIP1Q8TAD8 396 aaKnown RBP9.74□□□□□ -0.85
EPHA4-204ENST00000415749 VRTNQ9H8Y1 702 aa9.74□□□□□ -0.85
EPHA4-204ENST00000415749 PCDHB11Q9Y5F2 797 aa9.74□□□□□ -0.85
EPHA4-204ENST00000415749 UACAQ9BZF9 1416 aa9.73□□□□□ -0.85
EPHA4-204ENST00000415749 NCOA4Q13772 614 aa9.73□□□□□ -0.85
EPHA4-204ENST00000415749 RGS22Q8NE09 1264 aa9.73□□□□□ -0.85
EPHA4-204ENST00000415749 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
EPHA4-204ENST00000415749 PKD2L1Q9P0L9 805 aa9.73□□□□□ -0.85
EPHA4-204ENST00000415749 WASF2Q9Y6W5 498 aa9.73□□□□□ -0.85
EPHA4-204ENST00000415749 UHRF1BP1LA0JNW5 1464 aa9.72□□□□□ -0.85
EPHA4-204ENST00000415749 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.72□□□□□ -0.85
EPHA4-204ENST00000415749 ATP5J2-PTCD1G3V325 749 aa9.72□□□□□ -0.85
EPHA4-204ENST00000415749 ALDH1A1P00352 501 aa9.72□□□□□ -0.85
EPHA4-204ENST00000415749 TRAF7Q6Q0C0 670 aa9.72□□□□□ -0.85
EPHA4-204ENST00000415749 TRIM50Q86XT4 487 aa9.72□□□□□ -0.85
EPHA4-204ENST00000415749 CYP4X1Q8N118 509 aa9.72□□□□□ -0.85
EPHA4-204ENST00000415749 GZF1Q9H116 711 aaPredicted RBP9.72□□□□□ -0.85
EPHA4-204ENST00000415749 ESF1Q9H501 851 aaKnown RBP9.72□□□□□ -0.85
EPHA4-204ENST00000415749 MTMR7Q9Y216 660 aa9.72□□□□□ -0.85
EPHA4-204ENST00000415749 NOD1Q9Y239 953 aa9.72□□□□□ -0.85
EPHA4-204ENST00000415749 TTC24A2A3L6 582 aaPredicted RBP9.71□□□□□ -0.86
EPHA4-204ENST00000415749 MYCP01106 439 aaPredicted RBP9.71□□□□□ -0.86
EPHA4-204ENST00000415749 GRM5P41594 1212 aa9.71□□□□□ -0.86
EPHA4-204ENST00000415749 USP4Q13107 963 aa9.71□□□□□ -0.86
EPHA4-204ENST00000415749 OXLD1Q5BKU9 147 aa9.71□□□□□ -0.86
EPHA4-204ENST00000415749 ILDR2Q71H61 639 aa9.71□□□□□ -0.86
EPHA4-204ENST00000415749 CCDC116Q8IYX3 515 aa9.71□□□□□ -0.86
EPHA4-204ENST00000415749 DEPDC4Q8N2C3 294 aa9.71□□□□□ -0.86
EPHA4-204ENST00000415749 ERVH48-1M5A8F1 160 aa9.7□□□□□ -0.86
EPHA4-204ENST00000415749 GDF9O60383 454 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms