RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 CCDC146Q8IYE0 955 aa17.61■□□□□ 0.41
CNN3-203ENST00000415017 NGEFQ8N5V2 710 aa17.61■□□□□ 0.41
CNN3-203ENST00000415017 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
CNN3-203ENST00000415017 IL2RBP14784 551 aa17.6■□□□□ 0.41
CNN3-203ENST00000415017 CDCA7Q9BWT1 371 aaPredicted RBP17.6■□□□□ 0.41
CNN3-203ENST00000415017 RGS17Q9UGC6 210 aaPredicted RBP17.6■□□□□ 0.41
CNN3-203ENST00000415017 TRPC5Q9UL62 973 aaPredicted RBP17.6■□□□□ 0.41
CNN3-203ENST00000415017 APAF1O14727 1248 aa17.59■□□□□ 0.41
CNN3-203ENST00000415017 TMPOP42166 694 aaKnown RBP17.59■□□□□ 0.41
CNN3-203ENST00000415017 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
CNN3-203ENST00000415017 AMOTQ4VCS5 1084 aa17.59■□□□□ 0.41
CNN3-203ENST00000415017 GJD4Q96KN9 370 aaPredicted RBP17.59■□□□□ 0.41
CNN3-203ENST00000415017 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
CNN3-203ENST00000415017 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
CNN3-203ENST00000415017 NFE2L2Q16236 605 aa17.58■□□□□ 0.4
CNN3-203ENST00000415017 MTHFSDQ2M296 383 aaKnown RBP17.58■□□□□ 0.4
CNN3-203ENST00000415017 ZNF772Q68DY9 489 aaPredicted RBP17.58■□□□□ 0.4
CNN3-203ENST00000415017 RAPGEF4Q8WZA2 1011 aa17.58■□□□□ 0.4
CNN3-203ENST00000415017 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.4
CNN3-203ENST00000415017 MAPK8IP3Q9UPT6 1336 aa17.56■□□□□ 0.4
CNN3-203ENST00000415017 PLEKHO1Q53GL0 409 aaPredicted RBP17.56■□□□□ 0.4
CNN3-203ENST00000415017 QTRT2Q9H974 415 aaKnown RBP17.56■□□□□ 0.4
CNN3-203ENST00000415017 TNS2Q63HR2 1409 aa17.55■□□□□ 0.4
CNN3-203ENST00000415017 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
CNN3-203ENST00000415017 TRIM35Q9UPQ4 493 aa17.55■□□□□ 0.4
CNN3-203ENST00000415017 SIPA1L3O60292 1781 aaPredicted RBP17.55■□□□□ 0.4
CNN3-203ENST00000415017 HTATSF1O43719 755 aaKnown RBP17.54■□□□□ 0.4
CNN3-203ENST00000415017 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
CNN3-203ENST00000415017 BRWD3Q6RI45 1802 aa17.54■□□□□ 0.4
CNN3-203ENST00000415017 CYP27B1O15528 508 aa17.53■□□□□ 0.4
CNN3-203ENST00000415017 NEFMP07197 916 aa17.53■□□□□ 0.4
CNN3-203ENST00000415017 NKX1-1Q15270 411 aaPredicted RBP17.53■□□□□ 0.4
CNN3-203ENST00000415017 ZCRB1Q8TBF4 217 aaKnown RBP17.53■□□□□ 0.4
CNN3-203ENST00000415017 SPG7Q9UQ90 795 aa17.53■□□□□ 0.4
CNN3-203ENST00000415017 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
CNN3-203ENST00000415017 AKAP4Q5JQC9 854 aa17.52■□□□□ 0.4
CNN3-203ENST00000415017 CEMIPQ8WUJ3 1361 aa17.52■□□□□ 0.39
CNN3-203ENST00000415017 MAP3K5Q99683 1374 aa17.52■□□□□ 0.39
CNN3-203ENST00000415017 PHKG2P15735 406 aa17.51■□□□□ 0.39
CNN3-203ENST00000415017 RIPK4P57078 832 aa17.51■□□□□ 0.39
CNN3-203ENST00000415017 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
CNN3-203ENST00000415017 TOGARAM1Q9Y4F4 1720 aa17.51■□□□□ 0.39
CNN3-203ENST00000415017 PCDH11XQ9BZA7 1347 aa17.5■□□□□ 0.39
CNN3-203ENST00000415017 PCDH11YQ9BZA8 1340 aa17.5■□□□□ 0.39
CNN3-203ENST00000415017 GNAT3A8MTJ3 354 aa17.5■□□□□ 0.39
CNN3-203ENST00000415017 RBM6P78332 1123 aaKnown RBP17.5■□□□□ 0.39
CNN3-203ENST00000415017 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
CNN3-203ENST00000415017 WWC1Q8IX03 1113 aa17.5■□□□□ 0.39
CNN3-203ENST00000415017 RRP7AQ9Y3A4 280 aaKnown RBP17.5■□□□□ 0.39
CNN3-203ENST00000415017 MRC1P22897 1456 aa17.5■□□□□ 0.39
CNN3-203ENST00000415017 KDM6AO15550 1401 aaPredicted RBP17.49■□□□□ 0.39
CNN3-203ENST00000415017 SOCS7O14512 581 aa17.49■□□□□ 0.39
CNN3-203ENST00000415017 ZNF530Q6P9A1 599 aaPredicted RBP17.49■□□□□ 0.39
CNN3-203ENST00000415017 IFNL2Q8IZJ0 200 aa17.49■□□□□ 0.39
CNN3-203ENST00000415017 CCDC9Q9Y3X0 531 aaKnown RBP17.49■□□□□ 0.39
CNN3-203ENST00000415017 ITGB4P16144 1822 aa17.49■□□□□ 0.39
CNN3-203ENST00000415017 BCL9O00512 1426 aa17.48■□□□□ 0.39
CNN3-203ENST00000415017 EXOC5O00471 708 aa17.48■□□□□ 0.39
CNN3-203ENST00000415017 POTEAQ6S8J7 498 aa17.48■□□□□ 0.39
CNN3-203ENST00000415017 IL17REQ8NFR9 667 aa17.48■□□□□ 0.39
CNN3-203ENST00000415017 SBF2Q86WG5 1849 aa17.47■□□□□ 0.39
CNN3-203ENST00000415017 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
CNN3-203ENST00000415017 DDB1Q16531 1140 aa17.47■□□□□ 0.39
CNN3-203ENST00000415017 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
CNN3-203ENST00000415017 IL16Q14005 1332 aa17.47■□□□□ 0.39
CNN3-203ENST00000415017 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
CNN3-203ENST00000415017 NEUROD2Q15784 382 aa17.45■□□□□ 0.38
CNN3-203ENST00000415017 TRMT2AQ8IZ69 625 aaKnown RBP17.45■□□□□ 0.38
CNN3-203ENST00000415017 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
CNN3-203ENST00000415017 DCAF5Q96JK2 942 aa17.45■□□□□ 0.38
CNN3-203ENST00000415017 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
CNN3-203ENST00000415017 DOT1LQ8TEK3 1739 aa17.44■□□□□ 0.38
CNN3-203ENST00000415017 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
CNN3-203ENST00000415017 RNMTO43148 476 aaKnown RBP17.44■□□□□ 0.38
CNN3-203ENST00000415017 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
CNN3-203ENST00000415017 C1orf141Q5JVX7 400 aa17.44■□□□□ 0.38
CNN3-203ENST00000415017 SEPT12Q8IYM1 358 aa17.44■□□□□ 0.38
CNN3-203ENST00000415017 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
CNN3-203ENST00000415017 PAPPAQ13219 1627 aa17.43■□□□□ 0.38
CNN3-203ENST00000415017 RXRBP28702 533 aa17.43■□□□□ 0.38
CNN3-203ENST00000415017 PDE3BQ13370 1112 aa17.43■□□□□ 0.38
CNN3-203ENST00000415017 RGS12O14924 1447 aa17.42■□□□□ 0.38
CNN3-203ENST00000415017 DCTN1Q14203 1278 aa17.42■□□□□ 0.38
CNN3-203ENST00000415017 MPRIPQ6WCQ1 1025 aa17.42■□□□□ 0.38
CNN3-203ENST00000415017 MCM10Q7L590 875 aa17.42■□□□□ 0.38
CNN3-203ENST00000415017 ERVV-2B6SEH9 535 aa17.41■□□□□ 0.38
CNN3-203ENST00000415017 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
CNN3-203ENST00000415017 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
CNN3-203ENST00000415017 BABAM1Q9NWV8 329 aa17.41■□□□□ 0.38
CNN3-203ENST00000415017 SALL2Q9Y467 1007 aaPredicted RBP17.41■□□□□ 0.38
CNN3-203ENST00000415017 UBR2Q8IWV8 1755 aa17.4■□□□□ 0.38
CNN3-203ENST00000415017 NHSQ6T4R5 1651 aa17.4■□□□□ 0.38
CNN3-203ENST00000415017 CALD1Q05682 793 aaKnown RBP17.4■□□□□ 0.38
CNN3-203ENST00000415017 GOLGA2Q08379 1002 aa17.4■□□□□ 0.38
CNN3-203ENST00000415017 SLFN5Q08AF3 891 aa17.4■□□□□ 0.38
CNN3-203ENST00000415017 DDX54Q8TDD1 881 aaKnown RBP17.4■□□□□ 0.38
CNN3-203ENST00000415017 YTHDC1Q96MU7 727 aaKnown RBP17.4■□□□□ 0.38
CNN3-203ENST00000415017 THUMPD2Q9BTF0 503 aaKnown RBP17.4■□□□□ 0.38
CNN3-203ENST00000415017 CHL1O00533 1208 aa17.39■□□□□ 0.37
CNN3-203ENST00000415017 CFAP44Q96MT7 982 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms