RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 SMAPO00193 183 aa13.78□□□□□ -0.2
HCG27-202ENST00000414008 GPR37O15354 613 aa13.78□□□□□ -0.2
HCG27-202ENST00000414008 ANKK1Q8NFD2 765 aa13.78□□□□□ -0.2
HCG27-202ENST00000414008 PTCH1Q13635 1447 aa13.77□□□□□ -0.21
HCG27-202ENST00000414008 PRAG1Q86YV5 1406 aa13.77□□□□□ -0.21
HCG27-202ENST00000414008 CCER1Q8TC90 406 aaPredicted RBP13.77□□□□□ -0.21
HCG27-202ENST00000414008 TONSLQ96HA7 1378 aa13.77□□□□□ -0.21
HCG27-202ENST00000414008 YTHDC2Q9H6S0 1430 aaKnown RBP13.77□□□□□ -0.21
HCG27-202ENST00000414008 CLSPNQ9HAW4 1339 aa13.77□□□□□ -0.21
HCG27-202ENST00000414008 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
HCG27-202ENST00000414008 ATF3P18847 181 aa13.76□□□□□ -0.21
HCG27-202ENST00000414008 WAPLQ7Z5K2 1190 aa13.76□□□□□ -0.21
HCG27-202ENST00000414008 SIRT1Q96EB6 747 aa13.76□□□□□ -0.21
HCG27-202ENST00000414008 XIRP1Q702N8 1843 aaKnown RBP13.76□□□□□ -0.21
HCG27-202ENST00000414008 LAMC1P11047 1609 aa13.75□□□□□ -0.21
HCG27-202ENST00000414008 TECPR2O15040 1411 aa13.75□□□□□ -0.21
HCG27-202ENST00000414008 RBM46Q8TBY0 533 aaKnown RBP13.75□□□□□ -0.21
HCG27-202ENST00000414008 SLAIN2Q9P270 581 aa13.74□□□□□ -0.21
HCG27-202ENST00000414008 TRAK1Q9UPV9 953 aa13.74□□□□□ -0.21
HCG27-202ENST00000414008 NBPF1Q3BBV0 1214 aa13.73□□□□□ -0.21
HCG27-202ENST00000414008 ADGRG1Q9Y653 693 aa13.73□□□□□ -0.21
HCG27-202ENST00000414008 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
HCG27-202ENST00000414008 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
HCG27-202ENST00000414008 C3orf80F5H4A9 247 aa13.72□□□□□ -0.21
HCG27-202ENST00000414008 OATP04181 439 aa13.72□□□□□ -0.21
HCG27-202ENST00000414008 TPRNQ4KMQ1 711 aa13.72□□□□□ -0.21
HCG27-202ENST00000414008 THSD4Q6ZMP0 1018 aa13.72□□□□□ -0.21
HCG27-202ENST00000414008 PRAM1Q96QH2 718 aa13.72□□□□□ -0.21
HCG27-202ENST00000414008 POGKQ9P215 609 aa13.72□□□□□ -0.21
HCG27-202ENST00000414008 HCSTQ9UBK5 93 aa13.72□□□□□ -0.21
HCG27-202ENST00000414008 FAM135BQ49AJ0 1406 aa13.72□□□□□ -0.21
HCG27-202ENST00000414008 PLEKHH1Q9ULM0 1364 aa13.71□□□□□ -0.21
HCG27-202ENST00000414008 FECHP22830 423 aa13.71□□□□□ -0.21
HCG27-202ENST00000414008 EYA1Q99502 592 aa13.71□□□□□ -0.21
HCG27-202ENST00000414008 DCCP43146 1447 aa13.71□□□□□ -0.22
HCG27-202ENST00000414008 NBPF8Q3BBV2 869 aa13.7□□□□□ -0.22
HCG27-202ENST00000414008 LRCH3Q96II8 777 aa13.7□□□□□ -0.22
HCG27-202ENST00000414008 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.7□□□□□ -0.22
HCG27-202ENST00000414008 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
HCG27-202ENST00000414008 SOWAHBA6NEL2 793 aa13.69□□□□□ -0.22
HCG27-202ENST00000414008 SAFB2Q14151 953 aaKnown RBP eCLIP13.69□□□□□ -0.22
HCG27-202ENST00000414008 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.69□□□□□ -0.22
HCG27-202ENST00000414008 KNDC1Q76NI1 1749 aa13.68□□□□□ -0.22
HCG27-202ENST00000414008 HSPA1LP34931 641 aa13.68□□□□□ -0.22
HCG27-202ENST00000414008 PTPN5P54829 565 aa13.68□□□□□ -0.22
HCG27-202ENST00000414008 FAM161AQ3B820 660 aa13.68□□□□□ -0.22
HCG27-202ENST00000414008 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
HCG27-202ENST00000414008 KIAA1210Q9ULL0 1709 aa13.67□□□□□ -0.22
HCG27-202ENST00000414008 SAMD7Q7Z3H4 446 aa13.67□□□□□ -0.22
HCG27-202ENST00000414008 ROCK2O75116 1388 aaKnown RBP13.67□□□□□ -0.22
HCG27-202ENST00000414008 DNAJB2P25686 324 aa13.66□□□□□ -0.22
HCG27-202ENST00000414008 SLC4A3P48751 1232 aa13.66□□□□□ -0.22
HCG27-202ENST00000414008 BCAMP50895 628 aa13.66□□□□□ -0.22
HCG27-202ENST00000414008 MST1RQ04912 1400 aa13.65□□□□□ -0.22
HCG27-202ENST00000414008 NALCNQ8IZF0 1738 aa13.65□□□□□ -0.22
HCG27-202ENST00000414008 MAP2K5Q13163 448 aa13.65□□□□□ -0.22
HCG27-202ENST00000414008 ZC3H15Q8WU90 426 aaKnown RBP13.65□□□□□ -0.22
HCG27-202ENST00000414008 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
HCG27-202ENST00000414008 BRINP3Q76B58 766 aa13.64□□□□□ -0.23
HCG27-202ENST00000414008 METTL3Q86U44 580 aaKnown RBP13.64□□□□□ -0.23
HCG27-202ENST00000414008 PXYLP1Q8TE99 480 aa13.64□□□□□ -0.23
HCG27-202ENST00000414008 RCCD1A6NED2 376 aa13.63□□□□□ -0.23
HCG27-202ENST00000414008 HIRIP3Q9BW71 556 aaPredicted RBP13.63□□□□□ -0.23
HCG27-202ENST00000414008 CARD11Q9BXL7 1154 aa13.63□□□□□ -0.23
HCG27-202ENST00000414008 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
HCG27-202ENST00000414008 GPRASP1Q5JY77 1395 aa13.62□□□□□ -0.23
HCG27-202ENST00000414008 TRPM1Q7Z4N2 1603 aa13.62□□□□□ -0.23
HCG27-202ENST00000414008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.62□□□□□ -0.23
HCG27-202ENST00000414008 ORAI2Q96SN7 254 aa13.62□□□□□ -0.23
HCG27-202ENST00000414008 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
HCG27-202ENST00000414008 ROBO1Q9Y6N7 1651 aa13.61□□□□□ -0.23
HCG27-202ENST00000414008 WASLO00401 505 aaPredicted RBP13.61□□□□□ -0.23
HCG27-202ENST00000414008 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
HCG27-202ENST00000414008 SWT1Q5T5J6 900 aaKnown RBP13.61□□□□□ -0.23
HCG27-202ENST00000414008 KRI1Q8N9T8 703 aaKnown RBP13.61□□□□□ -0.23
HCG27-202ENST00000414008 TSR3Q9UJK0 312 aaKnown RBP13.61□□□□□ -0.23
HCG27-202ENST00000414008 CENPJQ9HC77 1338 aaPredicted RBP13.61□□□□□ -0.23
HCG27-202ENST00000414008 IRF6O14896 467 aa13.6□□□□□ -0.23
HCG27-202ENST00000414008 RNF40O75150 1001 aa13.6□□□□□ -0.23
HCG27-202ENST00000414008 ZMYND10O75800 440 aa13.6□□□□□ -0.23
HCG27-202ENST00000414008 NECTIN2Q92692 538 aa13.6□□□□□ -0.23
HCG27-202ENST00000414008 HPS5Q9UPZ3 1129 aa13.6□□□□□ -0.23
HCG27-202ENST00000414008 RALGAPBQ86X10 1494 aa13.6□□□□□ -0.23
HCG27-202ENST00000414008 PPP4CP60510 307 aa13.59□□□□□ -0.23
HCG27-202ENST00000414008 SLF2Q8IX21 1173 aa13.59□□□□□ -0.23
HCG27-202ENST00000414008 TMEM134Q9H6X4 195 aa13.59□□□□□ -0.23
HCG27-202ENST00000414008 EIF3AQ14152 1382 aaKnown RBP13.58□□□□□ -0.23
HCG27-202ENST00000414008 BARGINQ6ZT62 677 aa13.58□□□□□ -0.24
HCG27-202ENST00000414008 NYAP1Q6ZVC0 841 aa13.58□□□□□ -0.24
HCG27-202ENST00000414008 CDK19Q9BWU1 502 aa13.58□□□□□ -0.24
HCG27-202ENST00000414008 ARHGEF28Q8N1W1 1705 aaKnown RBP13.58□□□□□ -0.24
HCG27-202ENST00000414008 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
HCG27-202ENST00000414008 WBP1LQ9NX94 342 aa13.56□□□□□ -0.24
HCG27-202ENST00000414008 ADGRB2O60241 1585 aa13.56□□□□□ -0.24
HCG27-202ENST00000414008 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
HCG27-202ENST00000414008 FOXO3O43524 673 aa13.55□□□□□ -0.24
HCG27-202ENST00000414008 FMN2Q9NZ56 1722 aa13.55□□□□□ -0.24
HCG27-202ENST00000414008 CCDC102AQ96A19 550 aa13.54□□□□□ -0.24
HCG27-202ENST00000414008 LRRC59Q96AG4 307 aaKnown RBP13.54□□□□□ -0.24
HCG27-202ENST00000414008 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms