RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 PLEKHG2Q9H7P9 1386 aa17.57■□□□□ 0.4
SF1-206ENST00000413725 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
SF1-206ENST00000413725 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.4
SF1-206ENST00000413725 DDB1Q16531 1140 aa17.57■□□□□ 0.4
SF1-206ENST00000413725 HMOX1P09601 288 aa17.56■□□□□ 0.4
SF1-206ENST00000413725 EXOC5O00471 708 aa17.55■□□□□ 0.4
SF1-206ENST00000413725 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
SF1-206ENST00000413725 AEBP1Q8IUX7 1158 aa17.55■□□□□ 0.4
SF1-206ENST00000413725 MRS2Q9HD23 443 aa17.55■□□□□ 0.4
SF1-206ENST00000413725 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
SF1-206ENST00000413725 ILDR2Q71H61 639 aa17.54■□□□□ 0.4
SF1-206ENST00000413725 SBF2Q86WG5 1849 aa17.54■□□□□ 0.4
SF1-206ENST00000413725 KRT27Q7Z3Y8 459 aa17.52■□□□□ 0.4
SF1-206ENST00000413725 ZCRB1Q8TBF4 217 aaKnown RBP17.52■□□□□ 0.4
SF1-206ENST00000413725 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.4
SF1-206ENST00000413725 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
SF1-206ENST00000413725 DLG5Q8TDM6 1919 aa17.52■□□□□ 0.4
SF1-206ENST00000413725 FCHSD2O94868 740 aa17.51■□□□□ 0.39
SF1-206ENST00000413725 CCDC184Q52MB2 194 aa17.51■□□□□ 0.39
SF1-206ENST00000413725 RSPH6AQ9H0K4 717 aa17.51■□□□□ 0.39
SF1-206ENST00000413725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.51■□□□□ 0.39
SF1-206ENST00000413725 PCDH11XQ9BZA7 1347 aa17.5■□□□□ 0.39
SF1-206ENST00000413725 PCDH11YQ9BZA8 1340 aa17.5■□□□□ 0.39
SF1-206ENST00000413725 CCER2I3L3R5 266 aa17.5■□□□□ 0.39
SF1-206ENST00000413725 NEFMP07197 916 aa17.5■□□□□ 0.39
SF1-206ENST00000413725 PRKAR2BP31323 418 aa17.5■□□□□ 0.39
SF1-206ENST00000413725 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
SF1-206ENST00000413725 PLEKHO1Q53GL0 409 aaPredicted RBP17.5■□□□□ 0.39
SF1-206ENST00000413725 DOT1LQ8TEK3 1739 aa17.48■□□□□ 0.39
SF1-206ENST00000413725 SOCS7O14512 581 aa17.48■□□□□ 0.39
SF1-206ENST00000413725 SCN11AQ9UI33 1791 aa17.48■□□□□ 0.39
SF1-206ENST00000413725 ITGB4P16144 1822 aa17.47■□□□□ 0.39
SF1-206ENST00000413725 MIER1Q8N108 512 aa17.47■□□□□ 0.39
SF1-206ENST00000413725 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
SF1-206ENST00000413725 EP400Q96L91 3159 aa17.47■□□□□ 0.39
SF1-206ENST00000413725 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
SF1-206ENST00000413725 ZNF530Q6P9A1 599 aaPredicted RBP17.46■□□□□ 0.39
SF1-206ENST00000413725 MARCH10Q8NA82 808 aaPredicted RBP17.46■□□□□ 0.39
SF1-206ENST00000413725 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
SF1-206ENST00000413725 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
SF1-206ENST00000413725 GAS2L2Q8NHY3 880 aa17.45■□□□□ 0.38
SF1-206ENST00000413725 PNISRQ8TF01 805 aaKnown RBP17.45■□□□□ 0.38
SF1-206ENST00000413725 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
SF1-206ENST00000413725 FAM196AQ6ZSG2 479 aa17.44■□□□□ 0.38
SF1-206ENST00000413725 NHSQ6T4R5 1651 aa17.44■□□□□ 0.38
SF1-206ENST00000413725 BCL9O00512 1426 aa17.44■□□□□ 0.38
SF1-206ENST00000413725 TOGARAM1Q9Y4F4 1720 aa17.44■□□□□ 0.38
SF1-206ENST00000413725 CYP27B1O15528 508 aa17.43■□□□□ 0.38
SF1-206ENST00000413725 FAM182BQ5T319 152 aa17.43■□□□□ 0.38
SF1-206ENST00000413725 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
SF1-206ENST00000413725 PHKG2P15735 406 aa17.42■□□□□ 0.38
SF1-206ENST00000413725 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
SF1-206ENST00000413725 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
SF1-206ENST00000413725 PLEKHF1Q96S99 279 aa17.42■□□□□ 0.38
SF1-206ENST00000413725 AKAP4Q5JQC9 854 aa17.41■□□□□ 0.38
SF1-206ENST00000413725 CCDC146Q8IYE0 955 aa17.41■□□□□ 0.38
SF1-206ENST00000413725 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
SF1-206ENST00000413725 TNS1Q9HBL0 1735 aaKnown RBP17.41■□□□□ 0.38
SF1-206ENST00000413725 BTAF1O14981 1849 aa17.4■□□□□ 0.38
SF1-206ENST00000413725 ADAMTS7Q9UKP4 1686 aa17.4■□□□□ 0.38
SF1-206ENST00000413725 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
SF1-206ENST00000413725 MAP3K5Q99683 1374 aa17.4■□□□□ 0.38
SF1-206ENST00000413725 NKX1-1Q15270 411 aaPredicted RBP17.39■□□□□ 0.37
SF1-206ENST00000413725 GNAT3A8MTJ3 354 aa17.38■□□□□ 0.37
SF1-206ENST00000413725 DCAF5Q96JK2 942 aa17.38■□□□□ 0.37
SF1-206ENST00000413725 NFE2L2Q16236 605 aa17.37■□□□□ 0.37
SF1-206ENST00000413725 SIPA1L3O60292 1781 aaPredicted RBP17.37■□□□□ 0.37
SF1-206ENST00000413725 KDM6AO15550 1401 aaPredicted RBP17.36■□□□□ 0.37
SF1-206ENST00000413725 TRIM37O94972 964 aa17.35■□□□□ 0.37
SF1-206ENST00000413725 MPRIPQ6WCQ1 1025 aa17.35■□□□□ 0.37
SF1-206ENST00000413725 RTF1Q92541 710 aaKnown RBP17.35■□□□□ 0.37
SF1-206ENST00000413725 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
SF1-206ENST00000413725 ADRA2BP18089 450 aa17.34■□□□□ 0.37
SF1-206ENST00000413725 TMPOP42166 694 aaKnown RBP17.34■□□□□ 0.37
SF1-206ENST00000413725 SYTL4Q96C24 671 aaPredicted RBP17.34■□□□□ 0.37
SF1-206ENST00000413725 RGPD3A6NKT7 1758 aaPredicted RBP17.33■□□□□ 0.37
SF1-206ENST00000413725 RGPD4Q7Z3J3 1758 aa17.33■□□□□ 0.37
SF1-206ENST00000413725 MRC1P22897 1456 aa17.33■□□□□ 0.37
SF1-206ENST00000413725 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
SF1-206ENST00000413725 RNMTO43148 476 aaKnown RBP17.33■□□□□ 0.36
SF1-206ENST00000413725 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
SF1-206ENST00000413725 RIPK4P57078 832 aa17.33■□□□□ 0.36
SF1-206ENST00000413725 LMOD3Q0VAK6 560 aa17.33■□□□□ 0.36
SF1-206ENST00000413725 SF3B2Q13435 895 aaKnown RBP17.33■□□□□ 0.36
SF1-206ENST00000413725 CCDC125Q86Z20 511 aa17.33■□□□□ 0.36
SF1-206ENST00000413725 BCL11BQ9C0K0 894 aaPredicted RBP17.33■□□□□ 0.36
SF1-206ENST00000413725 APAF1O14727 1248 aa17.32■□□□□ 0.36
SF1-206ENST00000413725 PRIM1P49642 420 aaKnown RBP17.32■□□□□ 0.36
SF1-206ENST00000413725 TMOD3Q9NYL9 352 aa17.32■□□□□ 0.36
SF1-206ENST00000413725 KCNQ2O43526 872 aa17.31■□□□□ 0.36
SF1-206ENST00000413725 CABP4P57796 275 aa17.31■□□□□ 0.36
SF1-206ENST00000413725 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
SF1-206ENST00000413725 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
SF1-206ENST00000413725 LY75O60449 1722 aa17.3■□□□□ 0.36
SF1-206ENST00000413725 LGR6Q9HBX8 967 aa17.3■□□□□ 0.36
SF1-206ENST00000413725 CEMIPQ8WUJ3 1361 aa17.29■□□□□ 0.36
SF1-206ENST00000413725 TEFQ10587 303 aa17.29■□□□□ 0.36
SF1-206ENST00000413725 IL17REQ8NFR9 667 aa17.29■□□□□ 0.36
SF1-206ENST00000413725 UPF1Q92900 1129 aaKnown RBP eCLIP17.29■□□□□ 0.367e-7■■■■■ 34.7
SF1-206ENST00000413725 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms