RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 ERBB3P21860 1342 aa11.9□□□□□ -0.5
HCG18-234ENST00000413358 COL5A2P05997 1499 aaPredicted RBP11.9□□□□□ -0.5
HCG18-234ENST00000413358 IL13P35225 146 aa11.9□□□□□ -0.5
HCG18-234ENST00000413358 DDB1Q16531 1140 aa11.9□□□□□ -0.5
HCG18-234ENST00000413358 PNISRQ8TF01 805 aaKnown RBP11.9□□□□□ -0.5
HCG18-234ENST00000413358 RGPD5Q99666 1765 aa11.9□□□□□ -0.51
HCG18-234ENST00000413358 TNS1Q9HBL0 1735 aaKnown RBP11.89□□□□□ -0.51
HCG18-234ENST00000413358 CRB1P82279 1406 aa11.89□□□□□ -0.51
HCG18-234ENST00000413358 CDCA7Q9BWT1 371 aaPredicted RBP11.89□□□□□ -0.51
HCG18-234ENST00000413358 CAMTA1Q9Y6Y1 1673 aa11.89□□□□□ -0.51
HCG18-234ENST00000413358 KCNQ2O43526 872 aa11.88□□□□□ -0.51
HCG18-234ENST00000413358 AXIN2Q9Y2T1 843 aa11.88□□□□□ -0.51
HCG18-234ENST00000413358 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
HCG18-234ENST00000413358 OVOS2A0A0G2JMS6 1433 aa11.87□□□□□ -0.51
HCG18-234ENST00000413358 NEFMP07197 916 aa11.87□□□□□ -0.51
HCG18-234ENST00000413358 YY1P25490 414 aa11.87□□□□□ -0.51
HCG18-234ENST00000413358 ADAMTS8Q9UP79 889 aa11.87□□□□□ -0.51
HCG18-234ENST00000413358 WDR17Q8IZU2 1322 aa11.86□□□□□ -0.51
HCG18-234ENST00000413358 PLSCR1O15162 318 aa11.86□□□□□ -0.51
HCG18-234ENST00000413358 HMOX1P09601 288 aa11.86□□□□□ -0.51
HCG18-234ENST00000413358 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
HCG18-234ENST00000413358 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
HCG18-234ENST00000413358 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
HCG18-234ENST00000413358 MAPK8IP3Q9UPT6 1336 aa11.86□□□□□ -0.51
HCG18-234ENST00000413358 EXOC5O00471 708 aa11.85□□□□□ -0.51
HCG18-234ENST00000413358 SULT6B1Q6IMI4 303 aa11.85□□□□□ -0.51
HCG18-234ENST00000413358 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
HCG18-234ENST00000413358 USHBP1Q8N6Y0 703 aa11.85□□□□□ -0.51
HCG18-234ENST00000413358 YTHDC1Q96MU7 727 aaKnown RBP11.85□□□□□ -0.51
HCG18-234ENST00000413358 EYA1Q99502 592 aa11.85□□□□□ -0.51
HCG18-234ENST00000413358 RGPD2P0DJD1 1756 aa11.84□□□□□ -0.51
HCG18-234ENST00000413358 PRKAR2BP31323 418 aa11.84□□□□□ -0.51
HCG18-234ENST00000413358 AEBP1Q8IUX7 1158 aa11.84□□□□□ -0.51
HCG18-234ENST00000413358 RSPH6AQ9H0K4 717 aa11.84□□□□□ -0.51
HCG18-234ENST00000413358 NCAPD2Q15021 1401 aa11.84□□□□□ -0.51
HCG18-234ENST00000413358 KDRP35968 1356 aa11.83□□□□□ -0.52
HCG18-234ENST00000413358 FCHSD2O94868 740 aa11.83□□□□□ -0.52
HCG18-234ENST00000413358 NBPF6Q5VWK0 638 aa11.83□□□□□ -0.52
HCG18-234ENST00000413358 NBPF4Q96M43 638 aa11.83□□□□□ -0.52
HCG18-234ENST00000413358 STK32BQ9NY57 414 aa11.83□□□□□ -0.52
HCG18-234ENST00000413358 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
HCG18-234ENST00000413358 RREB1Q92766 1687 aa11.82□□□□□ -0.52
HCG18-234ENST00000413358 HNRNPUQ00839 825 aaKnown RBP eCLIP11.82□□□□□ -0.52
HCG18-234ENST00000413358 RUNDC1Q96C34 613 aa11.82□□□□□ -0.52
HCG18-234ENST00000413358 RAPGEF4Q8WZA2 1011 aa11.81□□□□□ -0.52
HCG18-234ENST00000413358 CARD10Q9BWT7 1032 aa11.81□□□□□ -0.52
HCG18-234ENST00000413358 NUP188Q5SRE5 1749 aa11.8□□□□□ -0.52
HCG18-234ENST00000413358 MARCH10Q8NA82 808 aaPredicted RBP11.8□□□□□ -0.52
HCG18-234ENST00000413358 MEGF6O75095 1541 aa11.8□□□□□ -0.52
HCG18-234ENST00000413358 MSH5O43196 834 aa11.79□□□□□ -0.52
HCG18-234ENST00000413358 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
HCG18-234ENST00000413358 PLEKHF1Q96S99 279 aa11.79□□□□□ -0.52
HCG18-234ENST00000413358 WNK3Q9BYP7 1800 aa11.79□□□□□ -0.52
HCG18-234ENST00000413358 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
HCG18-234ENST00000413358 SENP3-EIF4A1A0A087X0R7 540 aa11.78□□□□□ -0.52
HCG18-234ENST00000413358 APAF1O14727 1248 aa11.78□□□□□ -0.52
HCG18-234ENST00000413358 TXNRD1Q16881 649 aa11.78□□□□□ -0.52
HCG18-234ENST00000413358 ZBTB7AO95365 584 aa11.77□□□□□ -0.53
HCG18-234ENST00000413358 IL2RBP14784 551 aa11.77□□□□□ -0.53
HCG18-234ENST00000413358 GAS2L2Q8NHY3 880 aa11.77□□□□□ -0.53
HCG18-234ENST00000413358 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
HCG18-234ENST00000413358 RRP7AQ9Y3A4 280 aaKnown RBP11.77□□□□□ -0.53
HCG18-234ENST00000413358 BCL9O00512 1426 aa11.77□□□□□ -0.53
HCG18-234ENST00000413358 LRRC37A3O60309 1634 aa11.76□□□□□ -0.53
HCG18-234ENST00000413358 NEUROD2Q15784 382 aa11.76□□□□□ -0.53
HCG18-234ENST00000413358 NFE2L2Q16236 605 aa11.76□□□□□ -0.53
HCG18-234ENST00000413358 SLC15A2Q16348 729 aa11.76□□□□□ -0.53
HCG18-234ENST00000413358 PLEKHO1Q53GL0 409 aaPredicted RBP11.76□□□□□ -0.53
HCG18-234ENST00000413358 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
HCG18-234ENST00000413358 SALL2Q9Y467 1007 aaPredicted RBP11.76□□□□□ -0.53
HCG18-234ENST00000413358 PKD1L3Q7Z443 1732 aa11.76□□□□□ -0.53
HCG18-234ENST00000413358 RGPD3A6NKT7 1758 aaPredicted RBP11.75□□□□□ -0.53
HCG18-234ENST00000413358 RGPD4Q7Z3J3 1758 aa11.75□□□□□ -0.53
HCG18-234ENST00000413358 TMPOP42166 694 aaKnown RBP11.75□□□□□ -0.53
HCG18-234ENST00000413358 LMOD3Q0VAK6 560 aa11.75□□□□□ -0.53
HCG18-234ENST00000413358 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
HCG18-234ENST00000413358 ZNF530Q6P9A1 599 aaPredicted RBP11.75□□□□□ -0.53
HCG18-234ENST00000413358 PTF1AQ7RTS3 328 aa11.75□□□□□ -0.53
HCG18-234ENST00000413358 NGEFQ8N5V2 710 aa11.75□□□□□ -0.53
HCG18-234ENST00000413358 PHACTR3Q96KR7 559 aa11.75□□□□□ -0.53
HCG18-234ENST00000413358 SPG7Q9UQ90 795 aa11.75□□□□□ -0.53
HCG18-234ENST00000413358 ZBED9Q6R2W3 1325 aa11.75□□□□□ -0.53
HCG18-234ENST00000413358 TNS2Q63HR2 1409 aa11.75□□□□□ -0.53
HCG18-234ENST00000413358 C1orf141Q5JVX7 400 aa11.74□□□□□ -0.53
HCG18-234ENST00000413358 PROM2Q8N271 834 aa11.74□□□□□ -0.53
HCG18-234ENST00000413358 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
HCG18-234ENST00000413358 MTFR1LQ9H019 292 aa11.74□□□□□ -0.53
HCG18-234ENST00000413358 MAP3K5Q99683 1374 aa11.74□□□□□ -0.53
HCG18-234ENST00000413358 RIPK4P57078 832 aa11.73□□□□□ -0.53
HCG18-234ENST00000413358 MTHFSDQ2M296 383 aaKnown RBP11.73□□□□□ -0.53
HCG18-234ENST00000413358 SBF2Q86WG5 1849 aa11.73□□□□□ -0.53
HCG18-234ENST00000413358 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
HCG18-234ENST00000413358 PCDH11XQ9BZA7 1347 aa11.73□□□□□ -0.53
HCG18-234ENST00000413358 PCDH11YQ9BZA8 1340 aa11.73□□□□□ -0.53
HCG18-234ENST00000413358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.72□□□□□ -0.53
HCG18-234ENST00000413358 DLG5Q8TDM6 1919 aa11.71□□□□□ -0.53
HCG18-234ENST00000413358 GNAT3A8MTJ3 354 aa11.71□□□□□ -0.53
HCG18-234ENST00000413358 AKAP4Q5JQC9 854 aa11.71□□□□□ -0.53
HCG18-234ENST00000413358 ZCRB1Q8TBF4 217 aaKnown RBP11.71□□□□□ -0.53
HCG18-234ENST00000413358 SYT17Q9BSW7 474 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms