RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 NOB1Q9ULX3 412 aaKnown RBP11.15□□□□□ -0.62
HMGN1P34-201ENST00000413023 KIF1AQ12756 1690 aa11.14□□□□□ -0.63
HMGN1P34-201ENST00000413023 ALS2Q96Q42 1657 aa11.14□□□□□ -0.63
HMGN1P34-201ENST00000413023 CALD1Q05682 793 aaKnown RBP11.14□□□□□ -0.63
HMGN1P34-201ENST00000413023 CHRNA2Q15822 529 aa11.14□□□□□ -0.63
HMGN1P34-201ENST00000413023 SKAP1Q86WV1 359 aa11.14□□□□□ -0.63
HMGN1P34-201ENST00000413023 CLUAP1Q96AJ1 413 aa11.14□□□□□ -0.63
HMGN1P34-201ENST00000413023 LGR6Q9HBX8 967 aa11.14□□□□□ -0.63
HMGN1P34-201ENST00000413023 HTATSF1O43719 755 aaKnown RBP11.13□□□□□ -0.63
HMGN1P34-201ENST00000413023 GAS2L2Q8NHY3 880 aa11.13□□□□□ -0.63
HMGN1P34-201ENST00000413023 SMC4Q9NTJ3 1288 aa11.13□□□□□ -0.63
HMGN1P34-201ENST00000413023 TNS3Q68CZ2 1445 aa11.12□□□□□ -0.63
HMGN1P34-201ENST00000413023 DLG5Q8TDM6 1919 aa11.12□□□□□ -0.63
HMGN1P34-201ENST00000413023 GNAT3A8MTJ3 354 aa11.12□□□□□ -0.63
HMGN1P34-201ENST00000413023 IGHDP01880 384 aa11.12□□□□□ -0.63
HMGN1P34-201ENST00000413023 TRIM27P14373 513 aa11.12□□□□□ -0.63
HMGN1P34-201ENST00000413023 BRPF1P55201 1214 aaPredicted RBP11.12□□□□□ -0.63
HMGN1P34-201ENST00000413023 ALDH1L2Q3SY69 923 aa11.12□□□□□ -0.63
HMGN1P34-201ENST00000413023 ZKSCAN2Q63HK3 967 aa11.12□□□□□ -0.63
HMGN1P34-201ENST00000413023 KDM2BQ8NHM5 1336 aa11.11□□□□□ -0.63
HMGN1P34-201ENST00000413023 NCAPD2Q15021 1401 aa11.11□□□□□ -0.63
HMGN1P34-201ENST00000413023 TWISTNBQ3B726 338 aaPredicted RBP11.11□□□□□ -0.63
HMGN1P34-201ENST00000413023 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
HMGN1P34-201ENST00000413023 LTN1O94822 1766 aa11.11□□□□□ -0.63
HMGN1P34-201ENST00000413023 PHRF1Q9P1Y6 1649 aaKnown RBP11.1□□□□□ -0.63
HMGN1P34-201ENST00000413023 DZIP1LQ8IYY4 767 aaKnown RBP11.1□□□□□ -0.63
HMGN1P34-201ENST00000413023 COL18A1P39060 1754 aa11.09□□□□□ -0.63
HMGN1P34-201ENST00000413023 KIAA0232Q92628 1395 aa11.09□□□□□ -0.63
HMGN1P34-201ENST00000413023 KCNQ3O43525 872 aa11.09□□□□□ -0.63
HMGN1P34-201ENST00000413023 PLEKHO1Q53GL0 409 aaPredicted RBP11.09□□□□□ -0.63
HMGN1P34-201ENST00000413023 ATF7IPQ6VMQ6 1270 aa11.09□□□□□ -0.63
HMGN1P34-201ENST00000413023 TMEM57Q8N5G2 664 aa11.09□□□□□ -0.63
HMGN1P34-201ENST00000413023 RTF1Q92541 710 aaKnown RBP11.09□□□□□ -0.63
HMGN1P34-201ENST00000413023 ERBB3P21860 1342 aa11.09□□□□□ -0.63
HMGN1P34-201ENST00000413023 RGPD2P0DJD1 1756 aa11.08□□□□□ -0.64
HMGN1P34-201ENST00000413023 CPDO75976 1380 aa11.08□□□□□ -0.64
HMGN1P34-201ENST00000413023 MAP3K5Q99683 1374 aa11.08□□□□□ -0.64
HMGN1P34-201ENST00000413023 CANXP27824 592 aaKnown RBP11.08□□□□□ -0.64
HMGN1P34-201ENST00000413023 TAF7Q15545 349 aaPredicted RBP11.08□□□□□ -0.64
HMGN1P34-201ENST00000413023 MPRIPQ6WCQ1 1025 aa11.08□□□□□ -0.64
HMGN1P34-201ENST00000413023 ZNF428Q96B54 188 aa11.08□□□□□ -0.64
HMGN1P34-201ENST00000413023 NLRP2Q9NX02 1062 aa11.08□□□□□ -0.64
HMGN1P34-201ENST00000413023 LTBP4Q8N2S1 1624 aa11.08□□□□□ -0.64
HMGN1P34-201ENST00000413023 RNMTO43148 476 aaKnown RBP11.07□□□□□ -0.64
HMGN1P34-201ENST00000413023 MVPQ14764 893 aaKnown RBP11.07□□□□□ -0.64
HMGN1P34-201ENST00000413023 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
HMGN1P34-201ENST00000413023 TSPYL4Q9UJ04 414 aa11.07□□□□□ -0.64
HMGN1P34-201ENST00000413023 CEMIPQ8WUJ3 1361 aa11.06□□□□□ -0.64
HMGN1P34-201ENST00000413023 AMOTQ4VCS5 1084 aa11.06□□□□□ -0.64
HMGN1P34-201ENST00000413023 G2E3Q7L622 706 aa11.06□□□□□ -0.64
HMGN1P34-201ENST00000413023 PELP1Q8IZL8 1130 aaKnown RBP11.06□□□□□ -0.64
HMGN1P34-201ENST00000413023 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
HMGN1P34-201ENST00000413023 CRYBG1Q9Y4K1 1723 aa11.06□□□□□ -0.64
HMGN1P34-201ENST00000413023 ZBTB7BO15156 539 aaPredicted RBP11.05□□□□□ -0.64
HMGN1P34-201ENST00000413023 AKAP4Q5JQC9 854 aa11.05□□□□□ -0.64
HMGN1P34-201ENST00000413023 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
HMGN1P34-201ENST00000413023 RGPD5Q99666 1765 aa11.04□□□□□ -0.64
HMGN1P34-201ENST00000413023 IPO8O15397 1037 aaKnown RBP11.04□□□□□ -0.64
HMGN1P34-201ENST00000413023 ZBTB40Q9NUA8 1239 aa11.04□□□□□ -0.64
HMGN1P34-201ENST00000413023 BABAM1Q9NWV8 329 aa11.04□□□□□ -0.64
HMGN1P34-201ENST00000413023 CAMTA1Q9Y6Y1 1673 aa11.04□□□□□ -0.64
HMGN1P34-201ENST00000413023 CSB-PGBD3P0DP91 1061 aa11.03□□□□□ -0.64
HMGN1P34-201ENST00000413023 MS4A1P11836 297 aa11.03□□□□□ -0.64
HMGN1P34-201ENST00000413023 EIF4A1P60842 406 aaKnown RBP11.03□□□□□ -0.64
HMGN1P34-201ENST00000413023 CENPQQ7L2Z9 268 aaPredicted RBP11.03□□□□□ -0.64
HMGN1P34-201ENST00000413023 PRDM11Q9NQV5 511 aa11.03□□□□□ -0.64
HMGN1P34-201ENST00000413023 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
HMGN1P34-201ENST00000413023 KIF16BQ96L93 1317 aa11.03□□□□□ -0.64
HMGN1P34-201ENST00000413023 CYP27B1O15528 508 aa11.02□□□□□ -0.65
HMGN1P34-201ENST00000413023 SLC4A2P04920 1241 aa11.02□□□□□ -0.65
HMGN1P34-201ENST00000413023 PHKG2P15735 406 aa11.02□□□□□ -0.65
HMGN1P34-201ENST00000413023 MEGF6O75095 1541 aa11.02□□□□□ -0.65
HMGN1P34-201ENST00000413023 ABCC4O15439 1325 aa11.02□□□□□ -0.65
HMGN1P34-201ENST00000413023 RGS12O14924 1447 aa11.01□□□□□ -0.65
HMGN1P34-201ENST00000413023 TATP17735 454 aaPredicted RBP11.01□□□□□ -0.65
HMGN1P34-201ENST00000413023 LARP1Q6PKG0 1096 aaKnown RBP11.01□□□□□ -0.65
HMGN1P34-201ENST00000413023 ITPRIPQ8IWB1 547 aa11.01□□□□□ -0.65
HMGN1P34-201ENST00000413023 FTSJ3Q8IY81 847 aaKnown RBP11.01□□□□□ -0.65
HMGN1P34-201ENST00000413023 RAPGEF4Q8WZA2 1011 aa11.01□□□□□ -0.65
HMGN1P34-201ENST00000413023 NECTIN2Q92692 538 aa11.01□□□□□ -0.65
HMGN1P34-201ENST00000413023 LRRC37A3O60309 1634 aa11.01□□□□□ -0.65
HMGN1P34-201ENST00000413023 FAM208AQ9UK61 1670 aaKnown RBP11.01□□□□□ -0.65
HMGN1P34-201ENST00000413023 INTS3Q68E01 1043 aaKnown RBP11□□□□□ -0.65
HMGN1P34-201ENST00000413023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11□□□□□ -0.65
HMGN1P34-201ENST00000413023 DDX19BQ9UMR2 479 aa11□□□□□ -0.65
HMGN1P34-201ENST00000413023 WDR17Q8IZU2 1322 aa11□□□□□ -0.65
HMGN1P34-201ENST00000413023 NHSL1Q5SYE7 1610 aa10.99□□□□□ -0.65
HMGN1P34-201ENST00000413023 PRAMEF22A3QJZ6 481 aa10.99□□□□□ -0.65
HMGN1P34-201ENST00000413023 BTBD11A6QL63 1104 aa10.99□□□□□ -0.65
HMGN1P34-201ENST00000413023 AAMPQ13685 434 aa10.99□□□□□ -0.65
HMGN1P34-201ENST00000413023 C1orf141Q5JVX7 400 aa10.99□□□□□ -0.65
HMGN1P34-201ENST00000413023 SIRT2Q8IXJ6 389 aa10.99□□□□□ -0.65
HMGN1P34-201ENST00000413023 API5Q9BZZ5 524 aaKnown RBP10.99□□□□□ -0.65
HMGN1P34-201ENST00000413023 KDM6AO15550 1401 aaPredicted RBP10.99□□□□□ -0.65
HMGN1P34-201ENST00000413023 F6X3S4 739 aa10.98□□□□□ -0.65
HMGN1P34-201ENST00000413023 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
HMGN1P34-201ENST00000413023 TOM1L2Q6ZVM7 507 aa10.98□□□□□ -0.65
HMGN1P34-201ENST00000413023 NFATC2IPQ8NCF5 419 aa10.98□□□□□ -0.65
HMGN1P34-201ENST00000413023 CARD10Q9BWT7 1032 aa10.98□□□□□ -0.65
HMGN1P34-201ENST00000413023 STRN4Q9NRL3 753 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms