RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 ERBB3P21860 1342 aa15.1■□□□□ 0.01
SNRNP35-202ENST00000412157 RNF123Q5XPI4 1314 aa15.1■□□□□ 0.01
SNRNP35-202ENST00000412157 NBPF6Q5VWK0 638 aa15.09■□□□□ 0.01
SNRNP35-202ENST00000412157 USHBP1Q8N6Y0 703 aa15.09■□□□□ 0.01
SNRNP35-202ENST00000412157 NBPF4Q96M43 638 aa15.09■□□□□ 0.01
SNRNP35-202ENST00000412157 PRDM11Q9NQV5 511 aa15.09■□□□□ 0.01
SNRNP35-202ENST00000412157 LRRC37A3O60309 1634 aa15.09■□□□□ 0.01
SNRNP35-202ENST00000412157 COL14A1Q05707 1796 aaKnown RBP15.08■□□□□ 0.01
SNRNP35-202ENST00000412157 RRP1P56182 461 aaKnown RBP15.08■□□□□ 0
SNRNP35-202ENST00000412157 PARP4Q9UKK3 1724 aaKnown RBP15.08■□□□□ 0
SNRNP35-202ENST00000412157 CSB-PGBD3P0DP91 1061 aa15.07■□□□□ 0
SNRNP35-202ENST00000412157 CHRNA2Q15822 529 aa15.07■□□□□ 0
SNRNP35-202ENST00000412157 RTF1Q92541 710 aaKnown RBP15.07■□□□□ 0
SNRNP35-202ENST00000412157 AXIN2Q9Y2T1 843 aa15.07■□□□□ 0
SNRNP35-202ENST00000412157 FANCIQ9NVI1 1328 aa15.07■□□□□ 0
SNRNP35-202ENST00000412157 GNAI1P63096 354 aa15.06■□□□□ 0
SNRNP35-202ENST00000412157 IRX6P78412 446 aaPredicted RBP15.06■□□□□ 0
SNRNP35-202ENST00000412157 MTHFSDQ2M296 383 aaKnown RBP15.06■□□□□ 0
SNRNP35-202ENST00000412157 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
SNRNP35-202ENST00000412157 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.06■□□□□ 0
SNRNP35-202ENST00000412157 CT47B1P0C2W7 299 aaPredicted RBP15.05■□□□□ -0
SNRNP35-202ENST00000412157 IFT57Q9NWB7 429 aa15.05■□□□□ -0
SNRNP35-202ENST00000412157 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ -0
SNRNP35-202ENST00000412157 MAP3K5Q99683 1374 aa15.05■□□□□ -0
SNRNP35-202ENST00000412157 PKD1L3Q7Z443 1732 aa15.04■□□□□ -0
SNRNP35-202ENST00000412157 PLCH1Q4KWH8 1693 aa15.04■□□□□ -0
SNRNP35-202ENST00000412157 HTATSF1O43719 755 aaKnown RBP15.04■□□□□ -0
SNRNP35-202ENST00000412157 PLEKHO1Q53GL0 409 aaPredicted RBP15.04■□□□□ -0
SNRNP35-202ENST00000412157 TSR2Q969E8 191 aaKnown RBP15.04■□□□□ -0
SNRNP35-202ENST00000412157 THUMPD2Q9BTF0 503 aaKnown RBP15.04■□□□□ -0
SNRNP35-202ENST00000412157 NLRP2Q9NX02 1062 aa15.04■□□□□ -0
SNRNP35-202ENST00000412157 USP21Q9UK80 565 aa15.04■□□□□ -0
SNRNP35-202ENST00000412157 COL5A2P05997 1499 aaPredicted RBP15.03■□□□□ -0
SNRNP35-202ENST00000412157 PLEKHG2Q9H7P9 1386 aa15.03■□□□□ -0
SNRNP35-202ENST00000412157 FAM83GA6ND36 823 aa15.03■□□□□ -0
SNRNP35-202ENST00000412157 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
SNRNP35-202ENST00000412157 AMOTQ4VCS5 1084 aa15.03■□□□□ -0
SNRNP35-202ENST00000412157 DCTN1Q14203 1278 aa15.02■□□□□ -0
SNRNP35-202ENST00000412157 RAPGEF4Q8WZA2 1011 aa15.02■□□□□ -0
SNRNP35-202ENST00000412157 TRPC5Q9UL62 973 aaPredicted RBP15.02■□□□□ -0
SNRNP35-202ENST00000412157 TATP17735 454 aaPredicted RBP15.01□□□□□ -0.01
SNRNP35-202ENST00000412157 EXOSC9Q06265 439 aaKnown RBP15.01□□□□□ -0.01
SNRNP35-202ENST00000412157 MCM10Q7L590 875 aa15.01□□□□□ -0.01
SNRNP35-202ENST00000412157 CFAP44Q96MT7 982 aa15.01□□□□□ -0.01
SNRNP35-202ENST00000412157 SCN11AQ9UI33 1791 aa15.01□□□□□ -0.01
SNRNP35-202ENST00000412157 WDR17Q8IZU2 1322 aa15□□□□□ -0.01
SNRNP35-202ENST00000412157 ZNF853P0CG23 659 aa15□□□□□ -0.01
SNRNP35-202ENST00000412157 C1orf141Q5JVX7 400 aa15□□□□□ -0.01
SNRNP35-202ENST00000412157 ZNF530Q6P9A1 599 aaPredicted RBP15□□□□□ -0.01
SNRNP35-202ENST00000412157 WNK3Q9BYP7 1800 aa15□□□□□ -0.01
SNRNP35-202ENST00000412157 CRB1P82279 1406 aa15□□□□□ -0.01
SNRNP35-202ENST00000412157 MBIPQ9NS73 344 aa14.99□□□□□ -0.01
SNRNP35-202ENST00000412157 KDM3BQ7LBC6 1761 aa14.98□□□□□ -0.01
SNRNP35-202ENST00000412157 MEGF6O75095 1541 aa14.98□□□□□ -0.01
SNRNP35-202ENST00000412157 NWD2Q9ULI1 1742 aa14.98□□□□□ -0.01
SNRNP35-202ENST00000412157 ADAMTS7Q9UKP4 1686 aa14.98□□□□□ -0.01
SNRNP35-202ENST00000412157 CANXP27824 592 aaKnown RBP14.98□□□□□ -0.01
SNRNP35-202ENST00000412157 EVA1CP58658 441 aa14.98□□□□□ -0.01
SNRNP35-202ENST00000412157 AKAP4Q5JQC9 854 aa14.98□□□□□ -0.01
SNRNP35-202ENST00000412157 TOM1L2Q6ZVM7 507 aa14.98□□□□□ -0.01
SNRNP35-202ENST00000412157 OVOS2A0A0G2JMS6 1433 aa14.98□□□□□ -0.01
SNRNP35-202ENST00000412157 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
SNRNP35-202ENST00000412157 NRAPQ86VF7 1730 aa14.97□□□□□ -0.01
SNRNP35-202ENST00000412157 RARSP54136 660 aaKnown RBP14.97□□□□□ -0.01
SNRNP35-202ENST00000412157 STRN4Q9NRL3 753 aa14.97□□□□□ -0.01
SNRNP35-202ENST00000412157 SPG7Q9UQ90 795 aa14.97□□□□□ -0.01
SNRNP35-202ENST00000412157 ATRNO75882 1429 aa14.97□□□□□ -0.01
SNRNP35-202ENST00000412157 PLIN1O60240 522 aa14.96□□□□□ -0.01
SNRNP35-202ENST00000412157 ZNF428Q96B54 188 aa14.96□□□□□ -0.01
SNRNP35-202ENST00000412157 PPP4R2Q9NY27 417 aa14.96□□□□□ -0.01
SNRNP35-202ENST00000412157 CHL1O00533 1208 aa14.95□□□□□ -0.02
SNRNP35-202ENST00000412157 BCAR3O75815 825 aa14.95□□□□□ -0.02
SNRNP35-202ENST00000412157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.95□□□□□ -0.02
SNRNP35-202ENST00000412157 TSPYL4Q9UJ04 414 aa14.95□□□□□ -0.02
SNRNP35-202ENST00000412157 SHANK3Q9BYB0 1731 aa14.95□□□□□ -0.02
SNRNP35-202ENST00000412157 CACNA1FO60840 1977 aa14.94□□□□□ -0.02
SNRNP35-202ENST00000412157 FNBP4Q8N3X1 1017 aaPredicted RBP14.94□□□□□ -0.02
SNRNP35-202ENST00000412157 CARD10Q9BWT7 1032 aa14.94□□□□□ -0.02
SNRNP35-202ENST00000412157 SMC4Q9NTJ3 1288 aa14.94□□□□□ -0.02
SNRNP35-202ENST00000412157 BABAM1Q9NWV8 329 aa14.94□□□□□ -0.02
SNRNP35-202ENST00000412157 SRCAPQ6ZRS2 3230 aa14.93□□□□□ -0.02
SNRNP35-202ENST00000412157 ALDH1L2Q3SY69 923 aa14.93□□□□□ -0.02
SNRNP35-202ENST00000412157 BTG4Q9NY30 223 aa14.93□□□□□ -0.02
SNRNP35-202ENST00000412157 CEMIPQ8WUJ3 1361 aa14.93□□□□□ -0.02
SNRNP35-202ENST00000412157 KIF16BQ96L93 1317 aa14.92□□□□□ -0.02
SNRNP35-202ENST00000412157 TEFQ10587 303 aa14.92□□□□□ -0.02
SNRNP35-202ENST00000412157 TAF7Q15545 349 aaPredicted RBP14.92□□□□□ -0.02
SNRNP35-202ENST00000412157 TWISTNBQ3B726 338 aaPredicted RBP14.92□□□□□ -0.02
SNRNP35-202ENST00000412157 IL17REQ8NFR9 667 aa14.92□□□□□ -0.02
SNRNP35-202ENST00000412157 FRAT1Q92837 279 aaPredicted RBP14.92□□□□□ -0.02
SNRNP35-202ENST00000412157 BCL2L13Q9BXK5 485 aa14.92□□□□□ -0.02
SNRNP35-202ENST00000412157 RNMTO43148 476 aaKnown RBP14.91□□□□□ -0.02
SNRNP35-202ENST00000412157 IL2RBP14784 551 aa14.91□□□□□ -0.02
SNRNP35-202ENST00000412157 LARP1Q6PKG0 1096 aaKnown RBP14.91□□□□□ -0.02
SNRNP35-202ENST00000412157 VAMP4O75379 141 aa14.9□□□□□ -0.02
SNRNP35-202ENST00000412157 HSP90AB1P08238 724 aaKnown RBP14.9□□□□□ -0.02
SNRNP35-202ENST00000412157 MS4A1P11836 297 aa14.9□□□□□ -0.02
SNRNP35-202ENST00000412157 PDE3AQ14432 1141 aa14.9□□□□□ -0.02
SNRNP35-202ENST00000412157 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
SNRNP35-202ENST00000412157 IFNL2Q8IZJ0 200 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms