RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 RAPGEF4Q8WZA2 1011 aa20.96■□□□□ 0.95
AP001056.1-201ENST00000411956 PLEKHF1Q96S99 279 aa20.96■□□□□ 0.95
AP001056.1-201ENST00000411956 CCDC146Q8IYE0 955 aa20.95■□□□□ 0.94
AP001056.1-201ENST00000411956 SHANK3Q9BYB0 1731 aa20.95■□□□□ 0.94
AP001056.1-201ENST00000411956 TATP17735 454 aaPredicted RBP20.94■□□□□ 0.94
AP001056.1-201ENST00000411956 FAM98CQ17RN3 349 aaKnown RBP20.93■□□□□ 0.94
AP001056.1-201ENST00000411956 RUNDC1Q96C34 613 aa20.93■□□□□ 0.94
AP001056.1-201ENST00000411956 PNNQ9H307 717 aaKnown RBP20.93■□□□□ 0.94
AP001056.1-201ENST00000411956 TNS2Q63HR2 1409 aa20.93■□□□□ 0.94
AP001056.1-201ENST00000411956 CDCA7Q9BWT1 371 aaPredicted RBP20.92■□□□□ 0.94
AP001056.1-201ENST00000411956 MAPK8IP3Q9UPT6 1336 aa20.92■□□□□ 0.94
AP001056.1-201ENST00000411956 PHACTR3Q96KR7 559 aa20.91■□□□□ 0.94
AP001056.1-201ENST00000411956 RBM6P78332 1123 aaKnown RBP20.9■□□□□ 0.94
AP001056.1-201ENST00000411956 POTEAQ6S8J7 498 aa20.9■□□□□ 0.94
AP001056.1-201ENST00000411956 NEFMP07197 916 aa20.89■□□□□ 0.93
AP001056.1-201ENST00000411956 PLEKHO1Q53GL0 409 aaPredicted RBP20.88■□□□□ 0.93
AP001056.1-201ENST00000411956 ONECUT3O60422 494 aaPredicted RBP20.87■□□□□ 0.93
AP001056.1-201ENST00000411956 MTHFSDQ2M296 383 aaKnown RBP20.87■□□□□ 0.93
AP001056.1-201ENST00000411956 AMOTQ4VCS5 1084 aa20.87■□□□□ 0.93
AP001056.1-201ENST00000411956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.87■□□□□ 0.93
AP001056.1-201ENST00000411956 RXRBP28702 533 aa20.86■□□□□ 0.93
AP001056.1-201ENST00000411956 GAS2L2Q8NHY3 880 aa20.86■□□□□ 0.93
AP001056.1-201ENST00000411956 ZCRB1Q8TBF4 217 aaKnown RBP20.86■□□□□ 0.93
AP001056.1-201ENST00000411956 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
AP001056.1-201ENST00000411956 RGS12O14924 1447 aa20.86■□□□□ 0.93
AP001056.1-201ENST00000411956 PCDH11XQ9BZA7 1347 aa20.85■□□□□ 0.93
AP001056.1-201ENST00000411956 PCDH11YQ9BZA8 1340 aa20.85■□□□□ 0.93
AP001056.1-201ENST00000411956 A0A0G2JS52 829 aa20.85■□□□□ 0.93
AP001056.1-201ENST00000411956 MYT1Q01538 1121 aa20.85■□□□□ 0.93
AP001056.1-201ENST00000411956 DDB1Q16531 1140 aa20.85■□□□□ 0.93
AP001056.1-201ENST00000411956 DLG5Q8TDM6 1919 aa20.84■□□□□ 0.93
AP001056.1-201ENST00000411956 APAF1O14727 1248 aa20.84■□□□□ 0.93
AP001056.1-201ENST00000411956 NFE2L2Q16236 605 aa20.84■□□□□ 0.93
AP001056.1-201ENST00000411956 ZNF530Q6P9A1 599 aaPredicted RBP20.84■□□□□ 0.93
AP001056.1-201ENST00000411956 SEPT12Q8IYM1 358 aa20.84■□□□□ 0.93
AP001056.1-201ENST00000411956 EXOC5O00471 708 aa20.83■□□□□ 0.93
AP001056.1-201ENST00000411956 TMPOP42166 694 aaKnown RBP20.82■□□□□ 0.92
AP001056.1-201ENST00000411956 RRP7AQ9Y3A4 280 aaKnown RBP20.82■□□□□ 0.92
AP001056.1-201ENST00000411956 BRWD3Q6RI45 1802 aa20.82■□□□□ 0.92
AP001056.1-201ENST00000411956 MAP3K5Q99683 1374 aa20.82■□□□□ 0.92
AP001056.1-201ENST00000411956 ADAMTS7Q9UKP4 1686 aa20.81■□□□□ 0.92
AP001056.1-201ENST00000411956 SENP3-EIF4A1A0A087X0R7 540 aa20.81■□□□□ 0.92
AP001056.1-201ENST00000411956 CYP27B1O15528 508 aa20.81■□□□□ 0.92
AP001056.1-201ENST00000411956 PHKG2P15735 406 aa20.81■□□□□ 0.92
AP001056.1-201ENST00000411956 AKAP4Q5JQC9 854 aa20.8■□□□□ 0.92
AP001056.1-201ENST00000411956 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
AP001056.1-201ENST00000411956 TOGARAM1Q9Y4F4 1720 aa20.79■□□□□ 0.92
AP001056.1-201ENST00000411956 C1orf141Q5JVX7 400 aa20.79■□□□□ 0.92
AP001056.1-201ENST00000411956 DDX54Q8TDD1 881 aaKnown RBP20.79■□□□□ 0.92
AP001056.1-201ENST00000411956 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
AP001056.1-201ENST00000411956 RIPK4P57078 832 aa20.78■□□□□ 0.92
AP001056.1-201ENST00000411956 NEUROD2Q15784 382 aa20.78■□□□□ 0.92
AP001056.1-201ENST00000411956 VIRMAQ69YN4 1812 aaKnown RBP20.77■□□□□ 0.92
AP001056.1-201ENST00000411956 GNAT3A8MTJ3 354 aa20.77■□□□□ 0.92
AP001056.1-201ENST00000411956 MARCH10Q8NA82 808 aaPredicted RBP20.77■□□□□ 0.92
AP001056.1-201ENST00000411956 SCN11AQ9UI33 1791 aa20.77■□□□□ 0.91
AP001056.1-201ENST00000411956 DOT1LQ8TEK3 1739 aa20.76■□□□□ 0.91
AP001056.1-201ENST00000411956 PDE3BQ13370 1112 aa20.76■□□□□ 0.91
AP001056.1-201ENST00000411956 HNRNPUQ00839 825 aaKnown RBP eCLIP20.75■□□□□ 0.91
AP001056.1-201ENST00000411956 LMOD3Q0VAK6 560 aa20.75■□□□□ 0.91
AP001056.1-201ENST00000411956 NKX1-1Q15270 411 aaPredicted RBP20.75■□□□□ 0.91
AP001056.1-201ENST00000411956 NCBP3Q53F19 620 aaKnown RBP20.75■□□□□ 0.91
AP001056.1-201ENST00000411956 TRIM35Q9UPQ4 493 aa20.75■□□□□ 0.91
AP001056.1-201ENST00000411956 MRC1P22897 1456 aa20.75■□□□□ 0.91
AP001056.1-201ENST00000411956 HTATSF1O43719 755 aaKnown RBP20.74■□□□□ 0.91
AP001056.1-201ENST00000411956 HSP90AB1P08238 724 aaKnown RBP20.74■□□□□ 0.91
AP001056.1-201ENST00000411956 SALL2Q9Y467 1007 aaPredicted RBP20.74■□□□□ 0.91
AP001056.1-201ENST00000411956 CCDC27Q2M243 656 aa20.73■□□□□ 0.91
AP001056.1-201ENST00000411956 MPRIPQ6WCQ1 1025 aa20.73■□□□□ 0.91
AP001056.1-201ENST00000411956 KRT27Q7Z3Y8 459 aa20.73■□□□□ 0.91
AP001056.1-201ENST00000411956 CEMIPQ8WUJ3 1361 aa20.72■□□□□ 0.91
AP001056.1-201ENST00000411956 BCL9O00512 1426 aa20.72■□□□□ 0.91
AP001056.1-201ENST00000411956 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
AP001056.1-201ENST00000411956 MCM10Q7L590 875 aa20.72■□□□□ 0.91
AP001056.1-201ENST00000411956 NGEFQ8N5V2 710 aa20.72■□□□□ 0.91
AP001056.1-201ENST00000411956 RTF1Q92541 710 aaKnown RBP20.72■□□□□ 0.91
AP001056.1-201ENST00000411956 DCAF5Q96JK2 942 aa20.72■□□□□ 0.91
AP001056.1-201ENST00000411956 RNMTO43148 476 aaKnown RBP20.71■□□□□ 0.91
AP001056.1-201ENST00000411956 SIPA1L3O60292 1781 aaPredicted RBP20.7■□□□□ 0.9
AP001056.1-201ENST00000411956 IL17REQ8NFR9 667 aa20.7■□□□□ 0.9
AP001056.1-201ENST00000411956 THUMPD2Q9BTF0 503 aaKnown RBP20.7■□□□□ 0.9
AP001056.1-201ENST00000411956 LGR6Q9HBX8 967 aa20.7■□□□□ 0.9
AP001056.1-201ENST00000411956 NHSQ6T4R5 1651 aa20.7■□□□□ 0.9
AP001056.1-201ENST00000411956 FAM182BQ5T319 152 aa20.69■□□□□ 0.9
AP001056.1-201ENST00000411956 WWC1Q8IX03 1113 aa20.69■□□□□ 0.9
AP001056.1-201ENST00000411956 YTHDC1Q96MU7 727 aaKnown RBP20.69■□□□□ 0.9
AP001056.1-201ENST00000411956 ZNF521Q96K83 1311 aa20.69■□□□□ 0.9
AP001056.1-201ENST00000411956 ITGB4P16144 1822 aa20.67■□□□□ 0.9
AP001056.1-201ENST00000411956 ZBED9Q6R2W3 1325 aa20.67■□□□□ 0.9
AP001056.1-201ENST00000411956 SBF2Q86WG5 1849 aa20.67■□□□□ 0.9
AP001056.1-201ENST00000411956 PAPPAQ13219 1627 aa20.65■□□□□ 0.9
AP001056.1-201ENST00000411956 ERVV-2B6SEH9 535 aa20.65■□□□□ 0.9
AP001056.1-201ENST00000411956 TEFQ10587 303 aa20.64■□□□□ 0.89
AP001056.1-201ENST00000411956 ACSBG1Q96GR2 724 aa20.64■□□□□ 0.89
AP001056.1-201ENST00000411956 SLC52A2Q9HAB3 445 aa20.64■□□□□ 0.89
AP001056.1-201ENST00000411956 FAM196AQ6ZSG2 479 aa20.63■□□□□ 0.89
AP001056.1-201ENST00000411956 WDR63Q8IWG1 891 aa20.63■□□□□ 0.89
AP001056.1-201ENST00000411956 KDM3BQ7LBC6 1761 aa20.63■□□□□ 0.89
AP001056.1-201ENST00000411956 CABP4P57796 275 aa20.62■□□□□ 0.89
AP001056.1-201ENST00000411956 CALD1Q05682 793 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms