RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 GALNT6Q8NCL4 622 aa6.6□□□□□ -1.35
HMGB3P2-201ENST00000411913 PNMA1Q8ND90 353 aa6.6□□□□□ -1.35
HMGB3P2-201ENST00000411913 GMCL1Q96IK5 515 aa6.6□□□□□ -1.35
HMGB3P2-201ENST00000411913 IGF1RP08069 1367 aa6.59□□□□□ -1.35
HMGB3P2-201ENST00000411913 LILRA1O75019 489 aa6.59□□□□□ -1.35
HMGB3P2-201ENST00000411913 BCRP11274 1271 aa6.59□□□□□ -1.35
HMGB3P2-201ENST00000411913 TRIM22Q8IYM9 498 aa6.59□□□□□ -1.35
HMGB3P2-201ENST00000411913 TRIM52Q96A61 297 aa6.59□□□□□ -1.35
HMGB3P2-201ENST00000411913 ZNF837Q96EG3 531 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P2-201ENST00000411913 SPOCK3Q9BQ16 436 aa6.59□□□□□ -1.35
HMGB3P2-201ENST00000411913 OCSTAMPQ9BR26 566 aa6.59□□□□□ -1.35
HMGB3P2-201ENST00000411913 CYLDQ9NQC7 956 aa6.58□□□□□ -1.36
HMGB3P2-201ENST00000411913 AP1G2O75843 785 aa6.57□□□□□ -1.36
HMGB3P2-201ENST00000411913 RNF144AP50876 292 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P2-201ENST00000411913 KDF1Q8NAX2 398 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P2-201ENST00000411913 TRERF1Q96PN7 1200 aa6.57□□□□□ -1.36
HMGB3P2-201ENST00000411913 H7C1W4 665 aa6.56□□□□□ -1.36
HMGB3P2-201ENST00000411913 MEN1O00255 615 aa6.56□□□□□ -1.36
HMGB3P2-201ENST00000411913 DBN1Q16643 649 aa6.56□□□□□ -1.36
HMGB3P2-201ENST00000411913 GTPBP3Q969Y2 492 aaKnown RBP6.56□□□□□ -1.36
HMGB3P2-201ENST00000411913 GAS2L1Q99501 681 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P2-201ENST00000411913 NSFL1CQ9UNZ2 370 aaKnown RBP6.56□□□□□ -1.36
HMGB3P2-201ENST00000411913 PPP2R2DQ66LE6 453 aa6.55□□□□□ -1.36
HMGB3P2-201ENST00000411913 ACDQ96AP0 544 aa6.55□□□□□ -1.36
HMGB3P2-201ENST00000411913 SLC24A3Q9HC58 644 aa6.55□□□□□ -1.36
HMGB3P2-201ENST00000411913 ESPNB1AK53 854 aa6.54□□□□□ -1.36
HMGB3P2-201ENST00000411913 ATP5J2-PTCD1G3V325 749 aa6.54□□□□□ -1.36
HMGB3P2-201ENST00000411913 MX2P20592 715 aa6.54□□□□□ -1.36
HMGB3P2-201ENST00000411913 SKIV2LQ15477 1246 aaKnown RBP6.54□□□□□ -1.36
HMGB3P2-201ENST00000411913 DYRK1BQ9Y463 629 aa6.54□□□□□ -1.36
HMGB3P2-201ENST00000411913 K7ELQ4 463 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P2-201ENST00000411913 PROCP04070 461 aa6.53□□□□□ -1.36
HMGB3P2-201ENST00000411913 ITGB2P05107 769 aa6.53□□□□□ -1.36
HMGB3P2-201ENST00000411913 GPC1P35052 558 aa6.53□□□□□ -1.36
HMGB3P2-201ENST00000411913 SLC27A3Q5K4L6 730 aa6.53□□□□□ -1.36
HMGB3P2-201ENST00000411913 SEPT12Q8IYM1 358 aa6.53□□□□□ -1.36
HMGB3P2-201ENST00000411913 EPS8L1Q8TE68 723 aa6.53□□□□□ -1.36
HMGB3P2-201ENST00000411913 NLRP3Q96P20 1036 aa6.53□□□□□ -1.36
HMGB3P2-201ENST00000411913 POU4F2Q12837 409 aa6.52□□□□□ -1.37
HMGB3P2-201ENST00000411913 PROCA1Q8NCQ7 364 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P2-201ENST00000411913 LRRC4BQ9NT99 713 aa6.52□□□□□ -1.37
HMGB3P2-201ENST00000411913 A0A1W2PRU2 124 aa6.51□□□□□ -1.37
HMGB3P2-201ENST00000411913 OIP5O43482 229 aa6.51□□□□□ -1.37
HMGB3P2-201ENST00000411913 FBXO31Q5XUX0 539 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P2-201ENST00000411913 SH3D19Q5HYK7 790 aa6.5□□□□□ -1.37
HMGB3P2-201ENST00000411913 GIGYF1O75420 1035 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P2-201ENST00000411913 USP17L8P0C7I0 530 aa6.49□□□□□ -1.37
HMGB3P2-201ENST00000411913 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB3P2-201ENST00000411913 OXCT2Q9BYC2 517 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P2-201ENST00000411913 NUCKS1Q9H1E3 243 aaKnown RBP6.49□□□□□ -1.37
HMGB3P2-201ENST00000411913 RRAGCQ9HB90 399 aa6.49□□□□□ -1.37
HMGB3P2-201ENST00000411913 HMX1Q9NP08 348 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P2-201ENST00000411913 TIMMDC1Q9NPL8 285 aa6.49□□□□□ -1.37
HMGB3P2-201ENST00000411913 PCDHB9Q9Y5E1 797 aa6.49□□□□□ -1.37
HMGB3P2-201ENST00000411913 BAG6P46379 1132 aa6.48□□□□□ -1.37
HMGB3P2-201ENST00000411913 MAP2K3P46734 347 aa6.48□□□□□ -1.37
HMGB3P2-201ENST00000411913 NBPF10Q6P3W6 841 aaKnown RBP6.48□□□□□ -1.37
HMGB3P2-201ENST00000411913 NBPF15Q8N660 670 aa6.48□□□□□ -1.37
HMGB3P2-201ENST00000411913 ESF1Q9H501 851 aaKnown RBP6.48□□□□□ -1.37
HMGB3P2-201ENST00000411913 MKL2Q9ULH7 1088 aa6.48□□□□□ -1.37
HMGB3P2-201ENST00000411913 KRBA1A5PL33 1030 aa6.47□□□□□ -1.37
HMGB3P2-201ENST00000411913 F11P03951 625 aa6.47□□□□□ -1.37
HMGB3P2-201ENST00000411913 SNRPNP63162 240 aaKnown RBP6.47□□□□□ -1.37
HMGB3P2-201ENST00000411913 CC2D2BQ6DHV5 1058 aa6.47□□□□□ -1.37
HMGB3P2-201ENST00000411913 CCDC125Q86Z20 511 aa6.47□□□□□ -1.37
HMGB3P2-201ENST00000411913 FURINP09958 794 aa6.46□□□□□ -1.38
HMGB3P2-201ENST00000411913 WDR44Q5JSH3 913 aa6.46□□□□□ -1.38
HMGB3P2-201ENST00000411913 TAS1R3Q7RTX0 852 aa6.46□□□□□ -1.38
HMGB3P2-201ENST00000411913 CYP2U1Q7Z449 544 aa6.46□□□□□ -1.38
HMGB3P2-201ENST00000411913 GRIP2Q9C0E4 1043 aa6.46□□□□□ -1.38
HMGB3P2-201ENST00000411913 PHF24Q9UPV7 400 aa6.46□□□□□ -1.38
HMGB3P2-201ENST00000411913 ZBBXA8MT70 800 aa6.45□□□□□ -1.38
HMGB3P2-201ENST00000411913 ERVK-9P63128 1117 aa6.45□□□□□ -1.38
HMGB3P2-201ENST00000411913 CLN3Q13286 438 aa6.45□□□□□ -1.38
HMGB3P2-201ENST00000411913 RNF20Q5VTR2 975 aa6.45□□□□□ -1.38
HMGB3P2-201ENST00000411913 ALYREFQ86V81 257 aaKnown RBP6.45□□□□□ -1.38
HMGB3P2-201ENST00000411913 Q8N3U1 123 aa6.45□□□□□ -1.38
HMGB3P2-201ENST00000411913 DDRGK1Q96HY6 314 aa6.45□□□□□ -1.38
HMGB3P2-201ENST00000411913 CFHR5Q9BXR6 569 aa6.45□□□□□ -1.38
HMGB3P2-201ENST00000411913 SPATA31C2B4DYI2 1134 aa6.44□□□□□ -1.38
HMGB3P2-201ENST00000411913 SHISA8B8ZZ34 492 aa6.44□□□□□ -1.38
HMGB3P2-201ENST00000411913 WASLO00401 505 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P2-201ENST00000411913 EDARADDQ8WWZ3 215 aa6.44□□□□□ -1.38
HMGB3P2-201ENST00000411913 GPAMQ9HCL2 828 aa6.44□□□□□ -1.38
HMGB3P2-201ENST00000411913 GDF2Q9UK05 429 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P2-201ENST00000411913 AMPD1P23109 780 aa6.43□□□□□ -1.38
HMGB3P2-201ENST00000411913 GRIN2CQ14957 1233 aa6.43□□□□□ -1.38
HMGB3P2-201ENST00000411913 KLRG1Q96E93 195 aa6.43□□□□□ -1.38
HMGB3P2-201ENST00000411913 FAM117AQ9C073 453 aa6.43□□□□□ -1.38
HMGB3P2-201ENST00000411913 ARHGEF10LQ9HCE6 1279 aa6.43□□□□□ -1.38
HMGB3P2-201ENST00000411913 COL8A1P27658 744 aa6.42□□□□□ -1.38
HMGB3P2-201ENST00000411913 RFC5P40937 340 aa6.42□□□□□ -1.38
HMGB3P2-201ENST00000411913 KDM4CQ9H3R0 1056 aa6.42□□□□□ -1.38
HMGB3P2-201ENST00000411913 PCDHB11Q9Y5F2 797 aa6.42□□□□□ -1.38
HMGB3P2-201ENST00000411913 PIK3R2O00459 728 aa6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 FBXO45P0C2W1 286 aa6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 CSB-PGBD3P0DP91 1061 aa6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 GTF2E1P29083 439 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 PHKA2P46019 1235 aa6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 SCTRP47872 440 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms