RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 A0A1W2PRU2 124 aa4.13□□□□□ -1.75
RNU2-55P-201ENST00000411146 ADAMTS2O95450 1211 aa4.13□□□□□ -1.75
RNU2-55P-201ENST00000411146 STAU1O95793 577 aaKnown RBP4.13□□□□□ -1.75
RNU2-55P-201ENST00000411146 IRS1P35568 1242 aa4.13□□□□□ -1.75
RNU2-55P-201ENST00000411146 SNRKQ9NRH2 765 aa4.13□□□□□ -1.75
RNU2-55P-201ENST00000411146 CDV3Q9UKY7 258 aaKnown RBP4.13□□□□□ -1.75
RNU2-55P-201ENST00000411146 PCDHB9Q9Y5E1 797 aa4.13□□□□□ -1.75
RNU2-55P-201ENST00000411146 MEN1O00255 615 aa4.12□□□□□ -1.75
RNU2-55P-201ENST00000411146 THBS1P07996 1170 aa4.12□□□□□ -1.75
RNU2-55P-201ENST00000411146 RNF144AP50876 292 aaPredicted RBP4.12□□□□□ -1.75
RNU2-55P-201ENST00000411146 LYSMD3Q7Z3D4 306 aa4.12□□□□□ -1.75
RNU2-55P-201ENST00000411146 SVOPQ8N4V2 548 aa4.12□□□□□ -1.75
RNU2-55P-201ENST00000411146 CDCA7Q9BWT1 371 aaPredicted RBP4.12□□□□□ -1.75
RNU2-55P-201ENST00000411146 ZBBXA8MT70 800 aa4.11□□□□□ -1.75
RNU2-55P-201ENST00000411146 RNF225M0QZC1 329 aaPredicted RBP4.11□□□□□ -1.75
RNU2-55P-201ENST00000411146 CELA2BP08218 269 aaPredicted RBP4.11□□□□□ -1.75
RNU2-55P-201ENST00000411146 NBPF20Q3BBV1 942 aa4.11□□□□□ -1.75
RNU2-55P-201ENST00000411146 ZNF837Q96EG3 531 aaPredicted RBP4.11□□□□□ -1.75
RNU2-55P-201ENST00000411146 RAB6BQ9NRW1 208 aa4.11□□□□□ -1.75
RNU2-55P-201ENST00000411146 CNTNAP5Q8WYK1 1306 aa4.11□□□□□ -1.75
RNU2-55P-201ENST00000411146 ATP5J2-PTCD1G3V325 749 aa4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 ITGB2P05107 769 aa4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 BRPF1P55201 1214 aaPredicted RBP4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 NEUROD2Q15784 382 aa4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 RIPOR1Q6ZS17 1223 aa4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 MTMR14Q8NCE2 650 aa4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 GTPBP3Q969Y2 492 aaKnown RBP4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 PCMTD1Q96MG8 357 aaPredicted RBP4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 GAS2L1Q99501 681 aaPredicted RBP4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 OSBPL3Q9H4L5 887 aa4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 DNMT3AQ9Y6K1 912 aaPredicted RBP4.1□□□□□ -1.75
RNU2-55P-201ENST00000411146 PHKA2P46019 1235 aa4.09□□□□□ -1.75
RNU2-55P-201ENST00000411146 ERVK-9P63128 1117 aa4.09□□□□□ -1.75
RNU2-55P-201ENST00000411146 SRSF11Q05519 484 aaKnown RBP4.09□□□□□ -1.75
RNU2-55P-201ENST00000411146 TMEM259Q4ZIN3 620 aa4.09□□□□□ -1.75
RNU2-55P-201ENST00000411146 ACDQ96AP0 544 aa4.09□□□□□ -1.75
RNU2-55P-201ENST00000411146 CCDC85AQ96PX6 553 aaPredicted RBP4.09□□□□□ -1.75
RNU2-55P-201ENST00000411146 GRIP2Q9C0E4 1043 aa4.09□□□□□ -1.75
RNU2-55P-201ENST00000411146 TRAK2O60296 914 aa4.08□□□□□ -1.76
RNU2-55P-201ENST00000411146 IL2RAP01589 272 aa4.08□□□□□ -1.76
RNU2-55P-201ENST00000411146 CC2D2BQ6DHV5 1058 aa4.08□□□□□ -1.76
RNU2-55P-201ENST00000411146 GPAT2Q6NUI2 795 aa4.08□□□□□ -1.76
RNU2-55P-201ENST00000411146 C1orf229Q6ZS94 237 aaPredicted RBP4.08□□□□□ -1.76
RNU2-55P-201ENST00000411146 ARHGEF10LQ9HCE6 1279 aa4.08□□□□□ -1.76
RNU2-55P-201ENST00000411146 PCDHB11Q9Y5F2 797 aa4.08□□□□□ -1.76
RNU2-55P-201ENST00000411146 IGF1RP08069 1367 aa4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 IGHA1P01876 353 aa4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 MARSP56192 900 aaKnown RBP4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 NR1H3Q13133 447 aa4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 KANK3Q6NY19 840 aa4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 NBPF10Q6P3W6 841 aaKnown RBP4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 SEPT12Q8IYM1 358 aa4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 TRIM22Q8IYM9 498 aa4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 NBPF15Q8N660 670 aa4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 BCANQ96GW7 911 aa4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 GOPCQ9HD26 462 aa4.07□□□□□ -1.76
RNU2-55P-201ENST00000411146 CENPCQ03188 943 aa4.06□□□□□ -1.76
RNU2-55P-201ENST00000411146 CLN3Q13286 438 aa4.06□□□□□ -1.76
RNU2-55P-201ENST00000411146 SLC27A3Q5K4L6 730 aa4.06□□□□□ -1.76
RNU2-55P-201ENST00000411146 SCARF2Q96GP6 870 aaPredicted RBP4.06□□□□□ -1.76
RNU2-55P-201ENST00000411146 GPAMQ9HCL2 828 aa4.06□□□□□ -1.76
RNU2-55P-201ENST00000411146 CEP126Q9P2H0 1117 aa4.06□□□□□ -1.76
RNU2-55P-201ENST00000411146 HCN2Q9UL51 889 aa4.06□□□□□ -1.76
RNU2-55P-201ENST00000411146 HRH3Q9Y5N1 445 aa4.06□□□□□ -1.76
RNU2-55P-201ENST00000411146 C2CD2LO14523 706 aa4.05□□□□□ -1.76
RNU2-55P-201ENST00000411146 SNRPNP63162 240 aaKnown RBP4.05□□□□□ -1.76
RNU2-55P-201ENST00000411146 FOXK2Q01167 660 aa4.05□□□□□ -1.76
RNU2-55P-201ENST00000411146 IRF5Q13568 498 aa4.05□□□□□ -1.76
RNU2-55P-201ENST00000411146 UBAP2LQ14157 1087 aaKnown RBP4.05□□□□□ -1.76
RNU2-55P-201ENST00000411146 NLRP3Q96P20 1036 aa4.05□□□□□ -1.76
RNU2-55P-201ENST00000411146 TBC1D2BQ9UPU7 963 aa4.05□□□□□ -1.76
RNU2-55P-201ENST00000411146 DYRK1BQ9Y463 629 aa4.05□□□□□ -1.76
RNU2-55P-201ENST00000411146 SPATA31C2B4DYI2 1134 aa4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 SHISA8B8ZZ34 492 aa4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 PLA2G4EQ3MJ16 856 aa4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 PHTF2Q8N3S3 785 aa4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 PNMA1Q8ND90 353 aa4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 CNKSR1Q969H4 720 aa4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 DCAF5Q96JK2 942 aa4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 FHDC1Q9C0D6 1143 aaPredicted RBP4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 RUBCNLQ9H714 662 aa4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 TIMMDC1Q9NPL8 285 aa4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 MBIPQ9NS73 344 aa4.04□□□□□ -1.76
RNU2-55P-201ENST00000411146 WASLO00401 505 aaPredicted RBP4.03□□□□□ -1.76
RNU2-55P-201ENST00000411146 BCRP11274 1271 aa4.03□□□□□ -1.76
RNU2-55P-201ENST00000411146 GPC1P35052 558 aa4.03□□□□□ -1.76
RNU2-55P-201ENST00000411146 CTBSQ01459 385 aa4.03□□□□□ -1.76
RNU2-55P-201ENST00000411146 C4orf17Q53FE4 359 aa4.03□□□□□ -1.76
RNU2-55P-201ENST00000411146 XAGE2Q96GT9 111 aa4.03□□□□□ -1.76
RNU2-55P-201ENST00000411146 GMCL1Q96IK5 515 aa4.03□□□□□ -1.76
RNU2-55P-201ENST00000411146 ESYT1Q9BSJ8 1104 aa4.03□□□□□ -1.76
RNU2-55P-201ENST00000411146 F11P03951 625 aa4.02□□□□□ -1.77
RNU2-55P-201ENST00000411146 PROCP04070 461 aa4.02□□□□□ -1.77
RNU2-55P-201ENST00000411146 HOXB4P17483 251 aaPredicted RBP4.02□□□□□ -1.77
RNU2-55P-201ENST00000411146 MX2P20592 715 aa4.02□□□□□ -1.77
RNU2-55P-201ENST00000411146 MAP3K10Q02779 954 aa4.02□□□□□ -1.77
RNU2-55P-201ENST00000411146 TAS1R3Q7RTX0 852 aa4.02□□□□□ -1.77
RNU2-55P-201ENST00000411146 CYP2U1Q7Z449 544 aa4.02□□□□□ -1.77
RNU2-55P-201ENST00000411146 KLRG1Q96E93 195 aa4.02□□□□□ -1.77
RNU2-55P-201ENST00000411146 NUCKS1Q9H1E3 243 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms