RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 CDCA7Q9BWT1 371 aaPredicted RBP19.16■□□□□ 0.66
LIMS2-209ENST00000410038 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
LIMS2-209ENST00000410038 PNISRQ8TF01 805 aaKnown RBP19.15■□□□□ 0.66
LIMS2-209ENST00000410038 TATP17735 454 aaPredicted RBP19.14■□□□□ 0.66
LIMS2-209ENST00000410038 PKD1L3Q7Z443 1732 aa19.14■□□□□ 0.65
LIMS2-209ENST00000410038 OVOS2A0A0G2JMS6 1433 aa19.14■□□□□ 0.65
LIMS2-209ENST00000410038 A0A0G2JS52 829 aa19.14■□□□□ 0.65
LIMS2-209ENST00000410038 FCHSD2O94868 740 aa19.14■□□□□ 0.65
LIMS2-209ENST00000410038 MYT1Q01538 1121 aa19.14■□□□□ 0.65
LIMS2-209ENST00000410038 RSPH6AQ9H0K4 717 aa19.14■□□□□ 0.65
LIMS2-209ENST00000410038 SHANK3Q9BYB0 1731 aa19.13■□□□□ 0.65
LIMS2-209ENST00000410038 SEPT12Q8IYM1 358 aa19.13■□□□□ 0.65
LIMS2-209ENST00000410038 ADAMTS8Q9UP79 889 aa19.13■□□□□ 0.65
LIMS2-209ENST00000410038 PRKAR2BP31323 418 aa19.11■□□□□ 0.65
LIMS2-209ENST00000410038 PLEKHG2Q9H7P9 1386 aa19.11■□□□□ 0.65
LIMS2-209ENST00000410038 DDB1Q16531 1140 aa19.11■□□□□ 0.65
LIMS2-209ENST00000410038 TNS2Q63HR2 1409 aa19.1■□□□□ 0.65
LIMS2-209ENST00000410038 EP400Q96L91 3159 aa19.1■□□□□ 0.65
LIMS2-209ENST00000410038 EXOC5O00471 708 aa19.1■□□□□ 0.65
LIMS2-209ENST00000410038 ZCRB1Q8TBF4 217 aaKnown RBP19.1■□□□□ 0.65
LIMS2-209ENST00000410038 PLEKHF1Q96S99 279 aa19.08■□□□□ 0.65
LIMS2-209ENST00000410038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.08■□□□□ 0.65
LIMS2-209ENST00000410038 PHACTR3Q96KR7 559 aa19.08■□□□□ 0.64
LIMS2-209ENST00000410038 PLEKHO1Q53GL0 409 aaPredicted RBP19.07■□□□□ 0.64
LIMS2-209ENST00000410038 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
LIMS2-209ENST00000410038 PNNQ9H307 717 aaKnown RBP19.07■□□□□ 0.64
LIMS2-209ENST00000410038 SPG7Q9UQ90 795 aa19.07■□□□□ 0.64
LIMS2-209ENST00000410038 AMOTQ4VCS5 1084 aa19.06■□□□□ 0.64
LIMS2-209ENST00000410038 PDE3BQ13370 1112 aa19.05■□□□□ 0.64
LIMS2-209ENST00000410038 CCDC146Q8IYE0 955 aa19.05■□□□□ 0.64
LIMS2-209ENST00000410038 DLG5Q8TDM6 1919 aa19.05■□□□□ 0.64
LIMS2-209ENST00000410038 SF3B2Q13435 895 aaKnown RBP19.05■□□□□ 0.64
LIMS2-209ENST00000410038 MTHFSDQ2M296 383 aaKnown RBP19.05■□□□□ 0.64
LIMS2-209ENST00000410038 DDX54Q8TDD1 881 aaKnown RBP19.05■□□□□ 0.64
LIMS2-209ENST00000410038 PCDH11XQ9BZA7 1347 aa19.04■□□□□ 0.64
LIMS2-209ENST00000410038 PCDH11YQ9BZA8 1340 aa19.04■□□□□ 0.64
LIMS2-209ENST00000410038 KAT6BQ8WYB5 2073 aa19.04■□□□□ 0.64
LIMS2-209ENST00000410038 VIRMAQ69YN4 1812 aaKnown RBP19.04■□□□□ 0.64
LIMS2-209ENST00000410038 CYP27B1O15528 508 aa19.04■□□□□ 0.64
LIMS2-209ENST00000410038 KRT27Q7Z3Y8 459 aa19.04■□□□□ 0.64
LIMS2-209ENST00000410038 MARCH10Q8NA82 808 aaPredicted RBP19.04■□□□□ 0.64
LIMS2-209ENST00000410038 NEFMP07197 916 aa19.03■□□□□ 0.64
LIMS2-209ENST00000410038 ZNF530Q6P9A1 599 aaPredicted RBP19.03■□□□□ 0.64
LIMS2-209ENST00000410038 RUNDC1Q96C34 613 aa19.03■□□□□ 0.64
LIMS2-209ENST00000410038 MAPK8IP3Q9UPT6 1336 aa19.03■□□□□ 0.64
LIMS2-209ENST00000410038 PHKG2P15735 406 aa19.01■□□□□ 0.63
LIMS2-209ENST00000410038 FAM182BQ5T319 152 aa19.01■□□□□ 0.63
LIMS2-209ENST00000410038 IFNL2Q8IZJ0 200 aa19.01■□□□□ 0.63
LIMS2-209ENST00000410038 GAS2L2Q8NHY3 880 aa19.01■□□□□ 0.63
LIMS2-209ENST00000410038 SBF2Q86WG5 1849 aa19■□□□□ 0.63
LIMS2-209ENST00000410038 AKAP4Q5JQC9 854 aa18.98■□□□□ 0.63
LIMS2-209ENST00000410038 C1orf141Q5JVX7 400 aa18.98■□□□□ 0.63
LIMS2-209ENST00000410038 SCN11AQ9UI33 1791 aa18.98■□□□□ 0.63
LIMS2-209ENST00000410038 NKX1-1Q15270 411 aaPredicted RBP18.98■□□□□ 0.63
LIMS2-209ENST00000410038 NFE2L2Q16236 605 aa18.98■□□□□ 0.63
LIMS2-209ENST00000410038 DOT1LQ8TEK3 1739 aa18.97■□□□□ 0.63
LIMS2-209ENST00000410038 TOGARAM1Q9Y4F4 1720 aa18.97■□□□□ 0.63
LIMS2-209ENST00000410038 APAF1O14727 1248 aa18.97■□□□□ 0.63
LIMS2-209ENST00000410038 MAP3K5Q99683 1374 aa18.97■□□□□ 0.63
LIMS2-209ENST00000410038 TMPOP42166 694 aaKnown RBP18.96■□□□□ 0.63
LIMS2-209ENST00000410038 ADAMTS7Q9UKP4 1686 aa18.96■□□□□ 0.63
LIMS2-209ENST00000410038 ITGB4P16144 1822 aa18.96■□□□□ 0.63
LIMS2-209ENST00000410038 BCL9O00512 1426 aa18.95■□□□□ 0.62
LIMS2-209ENST00000410038 GNAT3A8MTJ3 354 aa18.95■□□□□ 0.62
LIMS2-209ENST00000410038 RRP7AQ9Y3A4 280 aaKnown RBP18.95■□□□□ 0.62
LIMS2-209ENST00000410038 KDM6AO15550 1401 aaPredicted RBP18.95■□□□□ 0.62
LIMS2-209ENST00000410038 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
LIMS2-209ENST00000410038 MPRIPQ6WCQ1 1025 aa18.95■□□□□ 0.62
LIMS2-209ENST00000410038 FAM196AQ6ZSG2 479 aa18.94■□□□□ 0.62
LIMS2-209ENST00000410038 DCAF5Q96JK2 942 aa18.94■□□□□ 0.62
LIMS2-209ENST00000410038 SENP3-EIF4A1A0A087X0R7 540 aa18.93■□□□□ 0.62
LIMS2-209ENST00000410038 BAG6P46379 1132 aa18.93■□□□□ 0.62
LIMS2-209ENST00000410038 RIPK4P57078 832 aa18.93■□□□□ 0.62
LIMS2-209ENST00000410038 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
LIMS2-209ENST00000410038 NHSQ6T4R5 1651 aa18.92■□□□□ 0.62
LIMS2-209ENST00000410038 LGR6Q9HBX8 967 aa18.92■□□□□ 0.62
LIMS2-209ENST00000410038 HTATSF1O43719 755 aaKnown RBP18.92■□□□□ 0.62
LIMS2-209ENST00000410038 IL17REQ8NFR9 667 aa18.92■□□□□ 0.62
LIMS2-209ENST00000410038 RNMTO43148 476 aaKnown RBP18.91■□□□□ 0.62
LIMS2-209ENST00000410038 DEFB132Q7Z7B7 95 aa18.91■□□□□ 0.62
LIMS2-209ENST00000410038 ACSBG1Q96GR2 724 aa18.91■□□□□ 0.62
LIMS2-209ENST00000410038 DCTN1Q14203 1278 aa18.9■□□□□ 0.62
LIMS2-209ENST00000410038 RTF1Q92541 710 aaKnown RBP18.9■□□□□ 0.62
LIMS2-209ENST00000410038 SIPA1L3O60292 1781 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-209ENST00000410038 CEMIPQ8WUJ3 1361 aa18.9■□□□□ 0.62
LIMS2-209ENST00000410038 PRIM1P49642 420 aaKnown RBP18.89■□□□□ 0.61
LIMS2-209ENST00000410038 MCM10Q7L590 875 aa18.89■□□□□ 0.61
LIMS2-209ENST00000410038 TRIM35Q9UPQ4 493 aa18.89■□□□□ 0.61
LIMS2-209ENST00000410038 ERVV-2B6SEH9 535 aa18.89■□□□□ 0.61
LIMS2-209ENST00000410038 KCNQ2O43526 872 aa18.89■□□□□ 0.61
LIMS2-209ENST00000410038 SRCAPQ6ZRS2 3230 aa18.88■□□□□ 0.61
LIMS2-209ENST00000410038 BTAF1O14981 1849 aa18.88■□□□□ 0.61
LIMS2-209ENST00000410038 LMOD3Q0VAK6 560 aa18.88■□□□□ 0.61
LIMS2-209ENST00000410038 MRC1P22897 1456 aa18.88■□□□□ 0.61
LIMS2-209ENST00000410038 TRIM37O94972 964 aa18.87■□□□□ 0.61
LIMS2-209ENST00000410038 PTF1AQ7RTS3 328 aa18.87■□□□□ 0.61
LIMS2-209ENST00000410038 SYTL4Q96C24 671 aaPredicted RBP18.87■□□□□ 0.61
LIMS2-209ENST00000410038 TNS1Q9HBL0 1735 aaKnown RBP18.86■□□□□ 0.61
LIMS2-209ENST00000410038 THUMPD2Q9BTF0 503 aaKnown RBP18.86■□□□□ 0.61
LIMS2-209ENST00000410038 SALL2Q9Y467 1007 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms