RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 LMO7Q8WWI1 1683 aa22.65■■□□□ 1.22
LRPPRC-203ENST00000409946 NCAPD2Q15021 1401 aa22.65■■□□□ 1.22
LRPPRC-203ENST00000409946 VIRMAQ69YN4 1812 aaKnown RBP22.65■■□□□ 1.22
LRPPRC-203ENST00000409946 TSPYL6Q8N831 410 aa22.65■■□□□ 1.22
LRPPRC-203ENST00000409946 SSH1Q8WYL5 1049 aa22.65■■□□□ 1.22
LRPPRC-203ENST00000409946 SMC4Q9NTJ3 1288 aa22.65■■□□□ 1.22
LRPPRC-203ENST00000409946 ROBO1Q9Y6N7 1651 aa22.64■■□□□ 1.22
LRPPRC-203ENST00000409946 PANK1Q8TE04 598 aa22.64■■□□□ 1.22
LRPPRC-203ENST00000409946 ERBB3P21860 1342 aa22.64■■□□□ 1.22
LRPPRC-203ENST00000409946 KIAA0232Q92628 1395 aa22.64■■□□□ 1.22
LRPPRC-203ENST00000409946 RTF1Q92541 710 aaKnown RBP22.64■■□□□ 1.21
LRPPRC-203ENST00000409946 ELL2O00472 640 aaPredicted RBP22.63■■□□□ 1.21
LRPPRC-203ENST00000409946 MAP3K5Q99683 1374 aa22.62■■□□□ 1.21
LRPPRC-203ENST00000409946 FAM208AQ9UK61 1670 aaKnown RBP22.62■■□□□ 1.21
LRPPRC-203ENST00000409946 GNAT3A8MTJ3 354 aa22.61■■□□□ 1.21
LRPPRC-203ENST00000409946 C8orf58Q8NAV2 365 aa22.61■■□□□ 1.21
LRPPRC-203ENST00000409946 PDE3AQ14432 1141 aa22.61■■□□□ 1.21
LRPPRC-203ENST00000409946 CHL1O00533 1208 aa22.6■■□□□ 1.21
LRPPRC-203ENST00000409946 VAMP4O75379 141 aa22.6■■□□□ 1.21
LRPPRC-203ENST00000409946 RLBP1P12271 317 aa22.6■■□□□ 1.21
LRPPRC-203ENST00000409946 MIS18AQ9NYP9 233 aa22.6■■□□□ 1.21
LRPPRC-203ENST00000409946 KRT24Q2M2I5 525 aa22.59■■□□□ 1.21
LRPPRC-203ENST00000409946 COG6Q9Y2V7 657 aa22.59■■□□□ 1.21
LRPPRC-203ENST00000409946 ABCC6O95255 1503 aa22.59■■□□□ 1.21
LRPPRC-203ENST00000409946 CPDO75976 1380 aa22.59■■□□□ 1.21
LRPPRC-203ENST00000409946 CLUAP1Q96AJ1 413 aa22.59■■□□□ 1.21
LRPPRC-203ENST00000409946 TWISTNBQ3B726 338 aaPredicted RBP22.58■■□□□ 1.21
LRPPRC-203ENST00000409946 RBM19Q9Y4C8 960 aaKnown RBP22.58■■□□□ 1.21
LRPPRC-203ENST00000409946 TCERG1O14776 1098 aaKnown RBP22.57■■□□□ 1.2
LRPPRC-203ENST00000409946 IL17REQ8NFR9 667 aa22.57■■□□□ 1.2
LRPPRC-203ENST00000409946 HTATSF1O43719 755 aaKnown RBP22.57■■□□□ 1.2
LRPPRC-203ENST00000409946 ZKSCAN2Q63HK3 967 aa22.57■■□□□ 1.2
LRPPRC-203ENST00000409946 NLRP2Q9NX02 1062 aa22.56■■□□□ 1.2
LRPPRC-203ENST00000409946 NOB1Q9ULX3 412 aaKnown RBP22.56■■□□□ 1.2
LRPPRC-203ENST00000409946 ALDH1L2Q3SY69 923 aa22.55■■□□□ 1.2
LRPPRC-203ENST00000409946 CSB-PGBD3P0DP91 1061 aa22.54■■□□□ 1.2
LRPPRC-203ENST00000409946 HAP1P54257 671 aaPredicted RBP22.54■■□□□ 1.2
LRPPRC-203ENST00000409946 ZNF530Q6P9A1 599 aaPredicted RBP22.54■■□□□ 1.2
LRPPRC-203ENST00000409946 TSPYL4Q9UJ04 414 aa22.54■■□□□ 1.2
LRPPRC-203ENST00000409946 TRIM27P14373 513 aa22.53■■□□□ 1.2
LRPPRC-203ENST00000409946 PLEKHO1Q53GL0 409 aaPredicted RBP22.53■■□□□ 1.2
LRPPRC-203ENST00000409946 PRDM11Q9NQV5 511 aa22.53■■□□□ 1.2
LRPPRC-203ENST00000409946 ZNF428Q96B54 188 aa22.52■■□□□ 1.2
LRPPRC-203ENST00000409946 AHDC1Q5TGY3 1603 aaPredicted RBP22.52■■□□□ 1.2
LRPPRC-203ENST00000409946 MRPL50Q8N5N7 158 aaKnown RBP22.52■■□□□ 1.2
LRPPRC-203ENST00000409946 KIF16BQ96L93 1317 aa22.51■■□□□ 1.19
LRPPRC-203ENST00000409946 MEGF6O75095 1541 aa22.51■■□□□ 1.19
LRPPRC-203ENST00000409946 DZIP1LQ8IYY4 767 aaKnown RBP22.51■■□□□ 1.19
LRPPRC-203ENST00000409946 LGR6Q9HBX8 967 aa22.51■■□□□ 1.19
LRPPRC-203ENST00000409946 ATF7IPQ6VMQ6 1270 aa22.5■■□□□ 1.19
LRPPRC-203ENST00000409946 FTSJ3Q8IY81 847 aaKnown RBP22.5■■□□□ 1.19
LRPPRC-203ENST00000409946 AMOTQ4VCS5 1084 aa22.5■■□□□ 1.19
LRPPRC-203ENST00000409946 CEMIPQ8WUJ3 1361 aa22.49■■□□□ 1.19
LRPPRC-203ENST00000409946 KDM3BQ7LBC6 1761 aa22.49■■□□□ 1.19
LRPPRC-203ENST00000409946 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
LRPPRC-203ENST00000409946 BRPF1P55201 1214 aaPredicted RBP22.47■■□□□ 1.19
LRPPRC-203ENST00000409946 MPRIPQ6WCQ1 1025 aa22.47■■□□□ 1.19
LRPPRC-203ENST00000409946 RAPGEF4Q8WZA2 1011 aa22.47■■□□□ 1.19
LRPPRC-203ENST00000409946 PHLPP1O60346 1717 aa22.47■■□□□ 1.19
LRPPRC-203ENST00000409946 COL5A2P05997 1499 aaPredicted RBP22.47■■□□□ 1.19
LRPPRC-203ENST00000409946 MVPQ14764 893 aaKnown RBP22.47■■□□□ 1.19
LRPPRC-203ENST00000409946 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
LRPPRC-203ENST00000409946 PKD1L3Q7Z443 1732 aa22.47■■□□□ 1.19
LRPPRC-203ENST00000409946 MYT1Q01538 1121 aa22.46■■□□□ 1.19
LRPPRC-203ENST00000409946 TAF7Q15545 349 aaPredicted RBP22.46■■□□□ 1.19
LRPPRC-203ENST00000409946 SIPA1L3O60292 1781 aaPredicted RBP22.46■■□□□ 1.19
LRPPRC-203ENST00000409946 ADAMTS7Q9UKP4 1686 aa22.45■■□□□ 1.18
LRPPRC-203ENST00000409946 IPO8O15397 1037 aaKnown RBP22.45■■□□□ 1.18
LRPPRC-203ENST00000409946 TATP17735 454 aaPredicted RBP22.45■■□□□ 1.18
LRPPRC-203ENST00000409946 COL22A1Q8NFW1 1626 aaPredicted RBP22.45■■□□□ 1.18
LRPPRC-203ENST00000409946 KDM2BQ8NHM5 1336 aa22.45■■□□□ 1.18
LRPPRC-203ENST00000409946 SCN11AQ9UI33 1791 aa22.45■■□□□ 1.18
LRPPRC-203ENST00000409946 TMEM57Q8N5G2 664 aa22.44■■□□□ 1.18
LRPPRC-203ENST00000409946 WDR17Q8IZU2 1322 aa22.43■■□□□ 1.18
LRPPRC-203ENST00000409946 RNMTO43148 476 aaKnown RBP22.43■■□□□ 1.18
LRPPRC-203ENST00000409946 MS4A1P11836 297 aa22.43■■□□□ 1.18
LRPPRC-203ENST00000409946 PARP4Q9UKK3 1724 aaKnown RBP22.43■■□□□ 1.18
LRPPRC-203ENST00000409946 ITPRIPQ8IWB1 547 aa22.43■■□□□ 1.18
LRPPRC-203ENST00000409946 COL16A1Q07092 1604 aaPredicted RBP22.43■■□□□ 1.18
LRPPRC-203ENST00000409946 SKAP1Q86WV1 359 aa22.41■■□□□ 1.18
LRPPRC-203ENST00000409946 STRN4Q9NRL3 753 aa22.41■■□□□ 1.18
LRPPRC-203ENST00000409946 TOM1L2Q6ZVM7 507 aa22.41■■□□□ 1.18
LRPPRC-203ENST00000409946 TEFQ10587 303 aa22.4■■□□□ 1.18
LRPPRC-203ENST00000409946 PIP4K2BP78356 416 aa22.39■■□□□ 1.17
LRPPRC-203ENST00000409946 BABAM1Q9NWV8 329 aa22.39■■□□□ 1.17
LRPPRC-203ENST00000409946 OVOS2A0A0G2JMS6 1433 aa22.39■■□□□ 1.17
LRPPRC-203ENST00000409946 KDM6AO15550 1401 aaPredicted RBP22.38■■□□□ 1.17
LRPPRC-203ENST00000409946 KCNQ3O43525 872 aa22.38■■□□□ 1.17
LRPPRC-203ENST00000409946 IGHDP01880 384 aa22.38■■□□□ 1.17
LRPPRC-203ENST00000409946 CENPQQ7L2Z9 268 aaPredicted RBP22.38■■□□□ 1.17
LRPPRC-203ENST00000409946 ARHGAP45Q92619 1136 aa22.38■■□□□ 1.17
LRPPRC-203ENST00000409946 COL14A1Q05707 1796 aaKnown RBP22.38■■□□□ 1.17
LRPPRC-203ENST00000409946 LARP1Q6PKG0 1096 aaKnown RBP22.38■■□□□ 1.17
LRPPRC-203ENST00000409946 SPG7Q9UQ90 795 aa22.38■■□□□ 1.17
LRPPRC-203ENST00000409946 PCDHB15Q9Y5E8 787 aa22.38■■□□□ 1.17
LRPPRC-203ENST00000409946 CACNA1FO60840 1977 aa22.37■■□□□ 1.17
LRPPRC-203ENST00000409946 PHKG2P15735 406 aa22.37■■□□□ 1.17
LRPPRC-203ENST00000409946 DDX19BQ9UMR2 479 aa22.37■■□□□ 1.17
LRPPRC-203ENST00000409946 SHANK3Q9BYB0 1731 aa22.36■■□□□ 1.17
LRPPRC-203ENST00000409946 NECTIN2Q92692 538 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms