RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 GJD4Q96KN9 370 aaPredicted RBP22.09■■□□□ 1.13
GCFC2-202ENST00000409857 PARP4Q9UKK3 1724 aaKnown RBP22.07■■□□□ 1.12
GCFC2-202ENST00000409857 TCP11L2Q8N4U5 519 aa22.07■■□□□ 1.12
GCFC2-202ENST00000409857 PLEKHG2Q9H7P9 1386 aa22.07■■□□□ 1.12
GCFC2-202ENST00000409857 KDRP35968 1356 aa22.06■■□□□ 1.12
GCFC2-202ENST00000409857 BARGINQ6ZT62 677 aa22.06■■□□□ 1.12
GCFC2-202ENST00000409857 CCDC9Q9Y3X0 531 aaKnown RBP22.06■■□□□ 1.12
GCFC2-202ENST00000409857 THSD7AQ9UPZ6 1657 aa22.05■■□□□ 1.12
GCFC2-202ENST00000409857 DISP2A7MBM2 1401 aa22.04■■□□□ 1.12
GCFC2-202ENST00000409857 RBM6P78332 1123 aaKnown RBP22.04■■□□□ 1.12
GCFC2-202ENST00000409857 CDCA7Q9BWT1 371 aaPredicted RBP22.04■■□□□ 1.12
GCFC2-202ENST00000409857 ANP32AP39687 249 aaKnown RBP22.03■■□□□ 1.12
GCFC2-202ENST00000409857 ONECUT3O60422 494 aaPredicted RBP22.03■■□□□ 1.12
GCFC2-202ENST00000409857 EXOC6Q8TAG9 804 aa22.03■■□□□ 1.12
GCFC2-202ENST00000409857 RRP1P56182 461 aaKnown RBP22.02■■□□□ 1.12
GCFC2-202ENST00000409857 IPO9Q96P70 1041 aaKnown RBP22.02■■□□□ 1.12
GCFC2-202ENST00000409857 U2SURPO15042 1029 aaKnown RBP22.02■■□□□ 1.11
GCFC2-202ENST00000409857 USP35Q9P2H5 1018 aa22.02■■□□□ 1.11
GCFC2-202ENST00000409857 POTEAQ6S8J7 498 aa22.01■■□□□ 1.11
GCFC2-202ENST00000409857 PKD1L3Q7Z443 1732 aa22.01■■□□□ 1.11
GCFC2-202ENST00000409857 USHBP1Q8N6Y0 703 aa22.01■■□□□ 1.11
GCFC2-202ENST00000409857 SULT6B1Q6IMI4 303 aa22■■□□□ 1.11
GCFC2-202ENST00000409857 IL2RBP14784 551 aa22■■□□□ 1.11
GCFC2-202ENST00000409857 RXRBP28702 533 aa22■■□□□ 1.11
GCFC2-202ENST00000409857 LRRC37A3O60309 1634 aa21.99■■□□□ 1.11
GCFC2-202ENST00000409857 MEGF6O75095 1541 aa21.99■■□□□ 1.11
GCFC2-202ENST00000409857 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
GCFC2-202ENST00000409857 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.11
GCFC2-202ENST00000409857 OVOS2A0A0G2JMS6 1433 aa21.98■■□□□ 1.11
GCFC2-202ENST00000409857 FCHSD2O94868 740 aa21.98■■□□□ 1.11
GCFC2-202ENST00000409857 WDR43Q15061 677 aaKnown RBP eCLIP21.98■■□□□ 1.11
GCFC2-202ENST00000409857 AEBP1Q8IUX7 1158 aa21.98■■□□□ 1.11
GCFC2-202ENST00000409857 RAPGEF4Q8WZA2 1011 aa21.98■■□□□ 1.11
GCFC2-202ENST00000409857 RCAN3Q9UKA8 241 aa21.98■■□□□ 1.11
GCFC2-202ENST00000409857 FAM98CQ17RN3 349 aaKnown RBP21.97■■□□□ 1.11
GCFC2-202ENST00000409857 SHANK3Q9BYB0 1731 aa21.97■■□□□ 1.11
GCFC2-202ENST00000409857 RSPH6AQ9H0K4 717 aa21.96■■□□□ 1.11
GCFC2-202ENST00000409857 HMOX1P09601 288 aa21.96■■□□□ 1.11
GCFC2-202ENST00000409857 TATP17735 454 aaPredicted RBP21.96■■□□□ 1.11
GCFC2-202ENST00000409857 PNNQ9H307 717 aaKnown RBP21.96■■□□□ 1.11
GCFC2-202ENST00000409857 ZBTB47Q9UFB7 747 aaPredicted RBP21.95■■□□□ 1.1
GCFC2-202ENST00000409857 CDCA7LQ96GN5 454 aa21.95■■□□□ 1.1
GCFC2-202ENST00000409857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.95■■□□□ 1.15e-7■■■■□ 21.1
GCFC2-202ENST00000409857 BRWD3Q6RI45 1802 aa21.94■■□□□ 1.1
GCFC2-202ENST00000409857 TNS2Q63HR2 1409 aa21.94■■□□□ 1.1
GCFC2-202ENST00000409857 NPM2Q86SE8 214 aaKnown RBP21.93■■□□□ 1.1
GCFC2-202ENST00000409857 ADAMTS8Q9UP79 889 aa21.92■■□□□ 1.1
GCFC2-202ENST00000409857 RGS12O14924 1447 aa21.92■■□□□ 1.1
GCFC2-202ENST00000409857 AMOTQ4VCS5 1084 aa21.91■■□□□ 1.1
GCFC2-202ENST00000409857 SEPT12Q8IYM1 358 aa21.91■■□□□ 1.1
GCFC2-202ENST00000409857 PRKAR2BP31323 418 aa21.9■■□□□ 1.1
GCFC2-202ENST00000409857 PLEKHF1Q96S99 279 aa21.9■■□□□ 1.1
GCFC2-202ENST00000409857 DDB1Q16531 1140 aa21.9■■□□□ 1.1
GCFC2-202ENST00000409857 EXOC5O00471 708 aa21.89■■□□□ 1.1
GCFC2-202ENST00000409857 PLEKHO1Q53GL0 409 aaPredicted RBP21.89■■□□□ 1.09
GCFC2-202ENST00000409857 ZCRB1Q8TBF4 217 aaKnown RBP21.89■■□□□ 1.09
GCFC2-202ENST00000409857 SPG7Q9UQ90 795 aa21.89■■□□□ 1.09
GCFC2-202ENST00000409857 PLIN1O60240 522 aa21.88■■□□□ 1.09
GCFC2-202ENST00000409857 PCDH11XQ9BZA7 1347 aa21.87■■□□□ 1.09
GCFC2-202ENST00000409857 PCDH11YQ9BZA8 1340 aa21.87■■□□□ 1.09
GCFC2-202ENST00000409857 A0A0G2JS52 829 aa21.86■■□□□ 1.09
GCFC2-202ENST00000409857 NEFMP07197 916 aa21.86■■□□□ 1.09
GCFC2-202ENST00000409857 RUNDC1Q96C34 613 aa21.86■■□□□ 1.09
GCFC2-202ENST00000409857 DLG5Q8TDM6 1919 aa21.85■■□□□ 1.09
GCFC2-202ENST00000409857 PDE4AP27815 886 aa21.84■■□□□ 1.09
GCFC2-202ENST00000409857 SKAP1Q86WV1 359 aa21.84■■□□□ 1.09
GCFC2-202ENST00000409857 PHACTR3Q96KR7 559 aa21.84■■□□□ 1.09
GCFC2-202ENST00000409857 MAPK8IP3Q9UPT6 1336 aa21.84■■□□□ 1.09
GCFC2-202ENST00000409857 TCERG1O14776 1098 aaKnown RBP21.84■■□□□ 1.09
GCFC2-202ENST00000409857 PDE3BQ13370 1112 aa21.84■■□□□ 1.09
GCFC2-202ENST00000409857 GAS2L2Q8NHY3 880 aa21.84■■□□□ 1.09
GCFC2-202ENST00000409857 VIRMAQ69YN4 1812 aaKnown RBP21.84■■□□□ 1.09
GCFC2-202ENST00000409857 BCL9O00512 1426 aa21.83■■□□□ 1.08
GCFC2-202ENST00000409857 MTHFSDQ2M296 383 aaKnown RBP21.82■■□□□ 1.08
GCFC2-202ENST00000409857 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
GCFC2-202ENST00000409857 KRT27Q7Z3Y8 459 aa21.81■■□□□ 1.08
GCFC2-202ENST00000409857 IFNL2Q8IZJ0 200 aa21.81■■□□□ 1.08
GCFC2-202ENST00000409857 CYP27B1O15528 508 aa21.8■■□□□ 1.08
GCFC2-202ENST00000409857 PHKG2P15735 406 aa21.8■■□□□ 1.08
GCFC2-202ENST00000409857 ZNF530Q6P9A1 599 aaPredicted RBP21.8■■□□□ 1.08
GCFC2-202ENST00000409857 MARCH10Q8NA82 808 aaPredicted RBP21.8■■□□□ 1.08
GCFC2-202ENST00000409857 SCN11AQ9UI33 1791 aa21.8■■□□□ 1.08
GCFC2-202ENST00000409857 NKX1-1Q15270 411 aaPredicted RBP21.8■■□□□ 1.08
GCFC2-202ENST00000409857 RTL5Q5HYW3 569 aaPredicted RBP21.8■■□□□ 1.08
GCFC2-202ENST00000409857 AKAP4Q5JQC9 854 aa21.8■■□□□ 1.08
GCFC2-202ENST00000409857 CCDC146Q8IYE0 955 aa21.8■■□□□ 1.08
GCFC2-202ENST00000409857 BACH2Q9BYV9 841 aa21.79■■□□□ 1.08
GCFC2-202ENST00000409857 C1orf141Q5JVX7 400 aa21.79■■□□□ 1.08
GCFC2-202ENST00000409857 DDX54Q8TDD1 881 aaKnown RBP21.79■■□□□ 1.08
GCFC2-202ENST00000409857 SBF2Q86WG5 1849 aa21.79■■□□□ 1.08
GCFC2-202ENST00000409857 HSP90AB1P08238 724 aaKnown RBP21.78■■□□□ 1.08
GCFC2-202ENST00000409857 NFE2L2Q16236 605 aa21.78■■□□□ 1.08
GCFC2-202ENST00000409857 CRBNQ96SW2 442 aa21.77■■□□□ 1.08
GCFC2-202ENST00000409857 MAP3K5Q99683 1374 aa21.77■■□□□ 1.08
GCFC2-202ENST00000409857 DOT1LQ8TEK3 1739 aa21.77■■□□□ 1.07
GCFC2-202ENST00000409857 TOGARAM1Q9Y4F4 1720 aa21.77■■□□□ 1.07
GCFC2-202ENST00000409857 NCBP3Q53F19 620 aaKnown RBP21.76■■□□□ 1.07
GCFC2-202ENST00000409857 HTATSF1O43719 755 aaKnown RBP21.76■■□□□ 1.07
GCFC2-202ENST00000409857 TMPOP42166 694 aaKnown RBP21.75■■□□□ 1.07
GCFC2-202ENST00000409857 LAS1LQ9Y4W2 734 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms