RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 TATP17735 454 aaPredicted RBP22.16■■□□□ 1.14
SUMO1-208ENST00000409627 PNISRQ8TF01 805 aaKnown RBP22.16■■□□□ 1.14
SUMO1-208ENST00000409627 FCHSD2O94868 740 aa22.15■■□□□ 1.14
SUMO1-208ENST00000409627 RSPH6AQ9H0K4 717 aa22.15■■□□□ 1.14
SUMO1-208ENST00000409627 BRWD3Q6RI45 1802 aa22.15■■□□□ 1.14
SUMO1-208ENST00000409627 RGS12O14924 1447 aa22.14■■□□□ 1.14
SUMO1-208ENST00000409627 TNS2Q63HR2 1409 aa22.14■■□□□ 1.14
SUMO1-208ENST00000409627 SEPT12Q8IYM1 358 aa22.12■■□□□ 1.13
SUMO1-208ENST00000409627 ADAMTS8Q9UP79 889 aa22.12■■□□□ 1.13
SUMO1-208ENST00000409627 PRKAR2BP31323 418 aa22.11■■□□□ 1.13
SUMO1-208ENST00000409627 PNNQ9H307 717 aaKnown RBP22.11■■□□□ 1.13
SUMO1-208ENST00000409627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.11■■□□□ 1.13
SUMO1-208ENST00000409627 A0A0G2JS52 829 aa22.1■■□□□ 1.13
SUMO1-208ENST00000409627 MYT1Q01538 1121 aa22.1■■□□□ 1.13
SUMO1-208ENST00000409627 DDB1Q16531 1140 aa22.1■■□□□ 1.13
SUMO1-208ENST00000409627 EXOC5O00471 708 aa22.08■■□□□ 1.13
SUMO1-208ENST00000409627 AMOTQ4VCS5 1084 aa22.08■■□□□ 1.13
SUMO1-208ENST00000409627 PLEKHO1Q53GL0 409 aaPredicted RBP22.08■■□□□ 1.13
SUMO1-208ENST00000409627 ZCRB1Q8TBF4 217 aaKnown RBP22.08■■□□□ 1.13
SUMO1-208ENST00000409627 PLEKHF1Q96S99 279 aa22.08■■□□□ 1.13
SUMO1-208ENST00000409627 SPG7Q9UQ90 795 aa22.08■■□□□ 1.13
SUMO1-208ENST00000409627 PCDH11XQ9BZA7 1347 aa22.06■■□□□ 1.12
SUMO1-208ENST00000409627 PCDH11YQ9BZA8 1340 aa22.06■■□□□ 1.12
SUMO1-208ENST00000409627 NEFMP07197 916 aa22.05■■□□□ 1.12
SUMO1-208ENST00000409627 DLG5Q8TDM6 1919 aa22.04■■□□□ 1.12
SUMO1-208ENST00000409627 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
SUMO1-208ENST00000409627 FAM9BQ8IZU0 186 aa22.04■■□□□ 1.12
SUMO1-208ENST00000409627 RUNDC1Q96C34 613 aa22.04■■□□□ 1.12
SUMO1-208ENST00000409627 PHACTR3Q96KR7 559 aa22.04■■□□□ 1.12
SUMO1-208ENST00000409627 MAPK8IP3Q9UPT6 1336 aa22.04■■□□□ 1.12
SUMO1-208ENST00000409627 VIRMAQ69YN4 1812 aaKnown RBP22.03■■□□□ 1.12
SUMO1-208ENST00000409627 MTHFSDQ2M296 383 aaKnown RBP22.02■■□□□ 1.12
SUMO1-208ENST00000409627 CCDC146Q8IYE0 955 aa22.02■■□□□ 1.12
SUMO1-208ENST00000409627 GAS2L2Q8NHY3 880 aa22.02■■□□□ 1.12
SUMO1-208ENST00000409627 CYP27B1O15528 508 aa22.01■■□□□ 1.11
SUMO1-208ENST00000409627 ZNF530Q6P9A1 599 aaPredicted RBP22.01■■□□□ 1.11
SUMO1-208ENST00000409627 KRT27Q7Z3Y8 459 aa22.01■■□□□ 1.11
SUMO1-208ENST00000409627 PHKG2P15735 406 aa22■■□□□ 1.11
SUMO1-208ENST00000409627 IFNL2Q8IZJ0 200 aa22■■□□□ 1.11
SUMO1-208ENST00000409627 MARCH10Q8NA82 808 aaPredicted RBP22■■□□□ 1.11
SUMO1-208ENST00000409627 DDX54Q8TDD1 881 aaKnown RBP22■■□□□ 1.11
SUMO1-208ENST00000409627 ADAMTS7Q9UKP4 1686 aa22■■□□□ 1.11
SUMO1-208ENST00000409627 SCN11AQ9UI33 1791 aa21.99■■□□□ 1.11
SUMO1-208ENST00000409627 BCL9O00512 1426 aa21.99■■□□□ 1.11
SUMO1-208ENST00000409627 DOT1LQ8TEK3 1739 aa21.98■■□□□ 1.11
SUMO1-208ENST00000409627 TOGARAM1Q9Y4F4 1720 aa21.98■■□□□ 1.11
SUMO1-208ENST00000409627 AKAP4Q5JQC9 854 aa21.98■■□□□ 1.11
SUMO1-208ENST00000409627 C1orf141Q5JVX7 400 aa21.98■■□□□ 1.11
SUMO1-208ENST00000409627 SBF2Q86WG5 1849 aa21.98■■□□□ 1.11
SUMO1-208ENST00000409627 NKX1-1Q15270 411 aaPredicted RBP21.97■■□□□ 1.11
SUMO1-208ENST00000409627 NFE2L2Q16236 605 aa21.97■■□□□ 1.11
SUMO1-208ENST00000409627 MAP3K5Q99683 1374 aa21.97■■□□□ 1.11
SUMO1-208ENST00000409627 HSP90AB1P08238 724 aaKnown RBP21.96■■□□□ 1.11
SUMO1-208ENST00000409627 NHSQ6T4R5 1651 aa21.95■■□□□ 1.1
SUMO1-208ENST00000409627 TMPOP42166 694 aaKnown RBP21.94■■□□□ 1.1
SUMO1-208ENST00000409627 KDM6AO15550 1401 aaPredicted RBP21.94■■□□□ 1.1
SUMO1-208ENST00000409627 ITGB4P16144 1822 aa21.94■■□□□ 1.1
SUMO1-208ENST00000409627 GNAT3A8MTJ3 354 aa21.93■■□□□ 1.1
SUMO1-208ENST00000409627 APAF1O14727 1248 aa21.92■■□□□ 1.1
SUMO1-208ENST00000409627 FAM182BQ5T319 152 aa21.92■■□□□ 1.1
SUMO1-208ENST00000409627 FAM196AQ6ZSG2 479 aa21.92■■□□□ 1.1
SUMO1-208ENST00000409627 DCAF5Q96JK2 942 aa21.92■■□□□ 1.1
SUMO1-208ENST00000409627 HTATSF1O43719 755 aaKnown RBP21.91■■□□□ 1.1
SUMO1-208ENST00000409627 MRC1P22897 1456 aa21.9■■□□□ 1.1
SUMO1-208ENST00000409627 SIPA1L3O60292 1781 aaPredicted RBP21.9■■□□□ 1.1
SUMO1-208ENST00000409627 RIPK4P57078 832 aa21.9■■□□□ 1.1
SUMO1-208ENST00000409627 LMOD3Q0VAK6 560 aa21.89■■□□□ 1.09
SUMO1-208ENST00000409627 NCBP3Q53F19 620 aaKnown RBP21.89■■□□□ 1.09
SUMO1-208ENST00000409627 MPRIPQ6WCQ1 1025 aa21.89■■□□□ 1.09
SUMO1-208ENST00000409627 RRP7AQ9Y3A4 280 aaKnown RBP21.89■■□□□ 1.09
SUMO1-208ENST00000409627 CEMIPQ8WUJ3 1361 aa21.88■■□□□ 1.09
SUMO1-208ENST00000409627 RNMTO43148 476 aaKnown RBP21.88■■□□□ 1.09
SUMO1-208ENST00000409627 RTF1Q92541 710 aaKnown RBP21.88■■□□□ 1.09
SUMO1-208ENST00000409627 KAT6BQ8WYB5 2073 aa21.87■■□□□ 1.09
SUMO1-208ENST00000409627 NEUROD2Q15784 382 aa21.87■■□□□ 1.09
SUMO1-208ENST00000409627 TNS1Q9HBL0 1735 aaKnown RBP21.86■■□□□ 1.09
SUMO1-208ENST00000409627 ERVV-2B6SEH9 535 aa21.86■■□□□ 1.09
SUMO1-208ENST00000409627 NGEFQ8N5V2 710 aa21.86■■□□□ 1.09
SUMO1-208ENST00000409627 IL17REQ8NFR9 667 aa21.86■■□□□ 1.09
SUMO1-208ENST00000409627 LGR6Q9HBX8 967 aa21.86■■□□□ 1.09
SUMO1-208ENST00000409627 BTAF1O14981 1849 aa21.85■■□□□ 1.09
SUMO1-208ENST00000409627 CCDC27Q2M243 656 aa21.85■■□□□ 1.09
SUMO1-208ENST00000409627 TRIM35Q9UPQ4 493 aa21.85■■□□□ 1.09
SUMO1-208ENST00000409627 ILDR2Q71H61 639 aa21.84■■□□□ 1.09
SUMO1-208ENST00000409627 MCM10Q7L590 875 aa21.84■■□□□ 1.09
SUMO1-208ENST00000409627 ACSBG1Q96GR2 724 aa21.84■■□□□ 1.09
SUMO1-208ENST00000409627 DCTN1Q14203 1278 aa21.83■■□□□ 1.09
SUMO1-208ENST00000409627 PAPPAQ13219 1627 aa21.82■■□□□ 1.08
SUMO1-208ENST00000409627 PRIM1P49642 420 aaKnown RBP21.82■■□□□ 1.08
SUMO1-208ENST00000409627 SLC52A2Q9HAB3 445 aa21.82■■□□□ 1.08
SUMO1-208ENST00000409627 CABP4P57796 275 aa21.81■■□□□ 1.08
SUMO1-208ENST00000409627 BCL11BQ9C0K0 894 aaPredicted RBP21.81■■□□□ 1.08
SUMO1-208ENST00000409627 TMOD3Q9NYL9 352 aa21.81■■□□□ 1.08
SUMO1-208ENST00000409627 KCNQ2O43526 872 aa21.8■■□□□ 1.08
SUMO1-208ENST00000409627 TEFQ10587 303 aa21.8■■□□□ 1.08
SUMO1-208ENST00000409627 SYTL4Q96C24 671 aaPredicted RBP21.8■■□□□ 1.08
SUMO1-208ENST00000409627 SENP3-EIF4A1A0A087X0R7 540 aa21.79■■□□□ 1.08
SUMO1-208ENST00000409627 TRIM37O94972 964 aa21.79■■□□□ 1.08
SUMO1-208ENST00000409627 THUMPD2Q9BTF0 503 aaKnown RBP21.79■■□□□ 1.08
SUMO1-208ENST00000409627 RGPD3A6NKT7 1758 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms