RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 USP6P35125 1406 aa11.08□□□□□ -0.64
LSM5-202ENST00000409292 NUP188Q5SRE5 1749 aa11.07□□□□□ -0.64
LSM5-202ENST00000409292 NBPF1Q3BBV0 1214 aa11.07□□□□□ -0.64
LSM5-202ENST00000409292 MAMSTRQ6ZN01 415 aa11.07□□□□□ -0.64
LSM5-202ENST00000409292 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
LSM5-202ENST00000409292 LMO7Q8WWI1 1683 aa11.07□□□□□ -0.64
LSM5-202ENST00000409292 CARD10Q9BWT7 1032 aa11.06□□□□□ -0.64
LSM5-202ENST00000409292 TTC21AQ8NDW8 1320 aa11.06□□□□□ -0.64
LSM5-202ENST00000409292 CCDC7Q96M83 1385 aa11.05□□□□□ -0.64
LSM5-202ENST00000409292 SOX12O15370 315 aa11.05□□□□□ -0.64
LSM5-202ENST00000409292 SEC24BO95487 1268 aa11.05□□□□□ -0.64
LSM5-202ENST00000409292 OTUD5Q96G74 571 aa11.05□□□□□ -0.64
LSM5-202ENST00000409292 RGPD3A6NKT7 1758 aaPredicted RBP11.04□□□□□ -0.64
LSM5-202ENST00000409292 RGPD4Q7Z3J3 1758 aa11.04□□□□□ -0.64
LSM5-202ENST00000409292 ZBTB7AO95365 584 aa11.04□□□□□ -0.64
LSM5-202ENST00000409292 TXNRD1Q16881 649 aa11.04□□□□□ -0.64
LSM5-202ENST00000409292 BCL9O00512 1426 aa11.03□□□□□ -0.64
LSM5-202ENST00000409292 CPSF1Q10570 1443 aaKnown RBP11.03□□□□□ -0.64
LSM5-202ENST00000409292 SLC15A2Q16348 729 aa11.03□□□□□ -0.64
LSM5-202ENST00000409292 ARHGEF25Q86VW2 580 aa11.03□□□□□ -0.64
LSM5-202ENST00000409292 MARCH10Q8NA82 808 aaPredicted RBP11.03□□□□□ -0.64
LSM5-202ENST00000409292 MTFR1LQ9H019 292 aa11.03□□□□□ -0.64
LSM5-202ENST00000409292 CIZ1Q9ULV3 898 aaPredicted RBP11.03□□□□□ -0.64
LSM5-202ENST00000409292 PCDHB8Q9UN66 801 aa11.03□□□□□ -0.64
LSM5-202ENST00000409292 SLIT3O75094 1523 aa11.03□□□□□ -0.64
LSM5-202ENST00000409292 TTC21BQ7Z4L5 1316 aa11.03□□□□□ -0.64
LSM5-202ENST00000409292 QRICH2Q9H0J4 1663 aa11.01□□□□□ -0.65
LSM5-202ENST00000409292 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
LSM5-202ENST00000409292 NLRP2Q9NX02 1062 aa11.01□□□□□ -0.65
LSM5-202ENST00000409292 LRRC37A3O60309 1634 aa11.01□□□□□ -0.65
LSM5-202ENST00000409292 ROCK2O75116 1388 aaKnown RBP11.01□□□□□ -0.65
LSM5-202ENST00000409292 KTN1Q86UP2 1357 aaKnown RBP11.01□□□□□ -0.65
LSM5-202ENST00000409292 HDGFL2Q7Z4V5 671 aaPredicted RBP11□□□□□ -0.65
LSM5-202ENST00000409292 SCUBE2Q9NQ36 999 aa11□□□□□ -0.65
LSM5-202ENST00000409292 AXIN2Q9Y2T1 843 aa11□□□□□ -0.65
LSM5-202ENST00000409292 AKAP12Q02952 1782 aa11□□□□□ -0.65
LSM5-202ENST00000409292 PEAK1Q9H792 1746 aa10.99□□□□□ -0.65
LSM5-202ENST00000409292 IL2RBP14784 551 aa10.99□□□□□ -0.65
LSM5-202ENST00000409292 HMGB2P26583 209 aaKnown RBP10.99□□□□□ -0.65
LSM5-202ENST00000409292 POLD1P28340 1107 aa10.99□□□□□ -0.65
LSM5-202ENST00000409292 ARXQ96QS3 562 aa10.99□□□□□ -0.65
LSM5-202ENST00000409292 SYT17Q9BSW7 474 aa10.99□□□□□ -0.65
LSM5-202ENST00000409292 FHDC1Q9C0D6 1143 aaPredicted RBP10.99□□□□□ -0.65
LSM5-202ENST00000409292 TRPM1Q7Z4N2 1603 aa10.98□□□□□ -0.65
LSM5-202ENST00000409292 SBF2Q86WG5 1849 aa10.98□□□□□ -0.65
LSM5-202ENST00000409292 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
LSM5-202ENST00000409292 TMC1Q8TDI8 760 aa10.98□□□□□ -0.65
LSM5-202ENST00000409292 L3MBTL2Q969R5 705 aa10.98□□□□□ -0.65
LSM5-202ENST00000409292 TNS2Q63HR2 1409 aa10.98□□□□□ -0.65
LSM5-202ENST00000409292 ABCC6O95255 1503 aa10.98□□□□□ -0.65
LSM5-202ENST00000409292 PTGER2P43116 358 aa10.97□□□□□ -0.65
LSM5-202ENST00000409292 GPR162Q16538 588 aa10.97□□□□□ -0.65
LSM5-202ENST00000409292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.65
LSM5-202ENST00000409292 ZNF784Q8NCA9 323 aaPredicted RBP10.97□□□□□ -0.65
LSM5-202ENST00000409292 SLC16A10Q8TF71 515 aa10.97□□□□□ -0.65
LSM5-202ENST00000409292 ACSBG1Q96GR2 724 aa10.97□□□□□ -0.65
LSM5-202ENST00000409292 TERF2IPQ9NYB0 399 aa10.97□□□□□ -0.65
LSM5-202ENST00000409292 PIK3C2AO00443 1686 aa10.96□□□□□ -0.65
LSM5-202ENST00000409292 POTEJP0CG39 1038 aa10.96□□□□□ -0.65
LSM5-202ENST00000409292 SLC27A3Q5K4L6 730 aa10.96□□□□□ -0.65
LSM5-202ENST00000409292 PTF1AQ7RTS3 328 aa10.96□□□□□ -0.65
LSM5-202ENST00000409292 COLQQ9Y215 455 aaPredicted RBP10.96□□□□□ -0.65
LSM5-202ENST00000409292 ERBB3P21860 1342 aa10.95□□□□□ -0.66
LSM5-202ENST00000409292 SENP3-EIF4A1A0A087X0R7 540 aa10.95□□□□□ -0.66
LSM5-202ENST00000409292 SLC24A1O60721 1099 aa10.95□□□□□ -0.66
LSM5-202ENST00000409292 PLCG2P16885 1265 aa10.95□□□□□ -0.66
LSM5-202ENST00000409292 NEUROD1Q13562 356 aa10.95□□□□□ -0.66
LSM5-202ENST00000409292 KAT6BQ8WYB5 2073 aa10.95□□□□□ -0.66
LSM5-202ENST00000409292 WNK3Q9BYP7 1800 aa10.95□□□□□ -0.66
LSM5-202ENST00000409292 COL18A1P39060 1754 aa10.95□□□□□ -0.66
LSM5-202ENST00000409292 CASZ1Q86V15 1759 aa10.95□□□□□ -0.66
LSM5-202ENST00000409292 ANKRD24Q8TF21 1146 aa10.94□□□□□ -0.66
LSM5-202ENST00000409292 PDGFDQ9GZP0 370 aaPredicted RBP10.94□□□□□ -0.66
LSM5-202ENST00000409292 USP31Q70CQ4 1352 aa10.93□□□□□ -0.66
LSM5-202ENST00000409292 MYOM1P52179 1685 aa10.93□□□□□ -0.66
LSM5-202ENST00000409292 GOLGA2Q08379 1002 aa10.93□□□□□ -0.66
LSM5-202ENST00000409292 CARD11Q9BXL7 1154 aa10.93□□□□□ -0.66
LSM5-202ENST00000409292 TFCP2L1Q9NZI6 479 aa10.93□□□□□ -0.66
LSM5-202ENST00000409292 MAP3K5Q99683 1374 aa10.92□□□□□ -0.66
LSM5-202ENST00000409292 DDX54Q8TDD1 881 aaKnown RBP10.92□□□□□ -0.66
LSM5-202ENST00000409292 SYTL4Q96C24 671 aaPredicted RBP10.92□□□□□ -0.66
LSM5-202ENST00000409292 SBNO2Q9Y2G9 1366 aa10.91□□□□□ -0.66
LSM5-202ENST00000409292 NFAT5O94916 1531 aa10.91□□□□□ -0.66
LSM5-202ENST00000409292 GRIN3BO60391 1043 aa10.91□□□□□ -0.66
LSM5-202ENST00000409292 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
LSM5-202ENST00000409292 PSEN1P49768 467 aa10.91□□□□□ -0.66
LSM5-202ENST00000409292 C1QTNF8P60827 252 aa10.91□□□□□ -0.66
LSM5-202ENST00000409292 IRX5P78411 483 aaPredicted RBP10.91□□□□□ -0.66
LSM5-202ENST00000409292 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
LSM5-202ENST00000409292 NME9Q86XW9 330 aa10.91□□□□□ -0.66
LSM5-202ENST00000409292 NHSQ6T4R5 1651 aa10.91□□□□□ -0.66
LSM5-202ENST00000409292 RGPD5Q99666 1765 aa10.9□□□□□ -0.66
LSM5-202ENST00000409292 CHD4Q14839 1912 aa10.9□□□□□ -0.66
LSM5-202ENST00000409292 AMPHP49418 695 aa10.9□□□□□ -0.66
LSM5-202ENST00000409292 LTV1Q96GA3 475 aaPredicted RBP10.9□□□□□ -0.66
LSM5-202ENST00000409292 COG3Q96JB2 828 aa10.9□□□□□ -0.66
LSM5-202ENST00000409292 OCEL1Q9H607 264 aa10.9□□□□□ -0.66
LSM5-202ENST00000409292 EDC4Q6P2E9 1401 aaKnown RBP10.9□□□□□ -0.66
LSM5-202ENST00000409292 IP6K1Q92551 441 aa10.89□□□□□ -0.67
LSM5-202ENST00000409292 PUS7Q96PZ0 661 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms