RNA–Protein interactions for RNA: ENST00000409229.7

SLC3A1-202, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,909 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-202ENST00000409229 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.18
SLC3A1-202ENST00000409229 WDR63Q8IWG1 891 aa13.9□□□□□ -0.18
SLC3A1-202ENST00000409229 TMX3Q96JJ7 454 aa13.9□□□□□ -0.18
SLC3A1-202ENST00000409229 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.9□□□□□ -0.18
SLC3A1-202ENST00000409229 SHROOM2Q13796 1616 aa13.9□□□□□ -0.18
SLC3A1-202ENST00000409229 UNC13AQ9UPW8 1703 aa13.9□□□□□ -0.18
SLC3A1-202ENST00000409229 NEK4P51957 841 aa13.89□□□□□ -0.19
SLC3A1-202ENST00000409229 RUNDC1Q96C34 613 aa13.89□□□□□ -0.19
SLC3A1-202ENST00000409229 FHOD1Q9Y613 1164 aa13.89□□□□□ -0.19
SLC3A1-202ENST00000409229 LAMC3Q9Y6N6 1575 aa13.89□□□□□ -0.19
SLC3A1-202ENST00000409229 PLA2G4AP47712 749 aa13.89□□□□□ -0.19
SLC3A1-202ENST00000409229 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.89□□□□□ -0.19
SLC3A1-202ENST00000409229 ERO1AQ96HE7 468 aa13.89□□□□□ -0.19
SLC3A1-202ENST00000409229 CWC15Q9P013 229 aaKnown RBP13.89□□□□□ -0.19
SLC3A1-202ENST00000409229 EXOC6BQ9Y2D4 811 aa13.89□□□□□ -0.19
SLC3A1-202ENST00000409229 RRP15Q9Y3B9 282 aaKnown RBP13.89□□□□□ -0.19
SLC3A1-202ENST00000409229 GRIN2AQ12879 1464 aa13.88□□□□□ -0.19
SLC3A1-202ENST00000409229 WDR7Q9Y4E6 1490 aa13.88□□□□□ -0.19
SLC3A1-202ENST00000409229 GSPT1P15170 499 aaKnown RBP13.88□□□□□ -0.19
SLC3A1-202ENST00000409229 EXOSC9Q06265 439 aaKnown RBP13.88□□□□□ -0.19
SLC3A1-202ENST00000409229 DEF6Q9H4E7 631 aa13.88□□□□□ -0.19
SLC3A1-202ENST00000409229 ZCCHC17Q9NP64 241 aaKnown RBP13.88□□□□□ -0.19
SLC3A1-202ENST00000409229 A0A1B0GUL7 405 aa13.88□□□□□ -0.19
SLC3A1-202ENST00000409229 PNMA6AP0CW24 399 aaPredicted RBP13.88□□□□□ -0.19
SLC3A1-202ENST00000409229 TTC31Q49AM3 519 aaPredicted RBP13.88□□□□□ -0.19
SLC3A1-202ENST00000409229 DNMT1P26358 1616 aaKnown RBP13.88□□□□□ -0.19
SLC3A1-202ENST00000409229 TPM4P67936 248 aa13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 GPS2Q13227 327 aa13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 ERCC6LQ2NKX8 1250 aa13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 DNAJC21Q5F1R6 531 aaKnown RBP13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 ZSCAN25Q6NSZ9 544 aa13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 SRLQ86TD4 932 aa13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 CNPY2Q9Y2B0 182 aa13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 PTPRCP08575 1304 aa13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 CDK13Q14004 1512 aaKnown RBP13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 GRIPAP1Q4V328 841 aa13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 ATG3Q9NT62 314 aa13.87□□□□□ -0.19
SLC3A1-202ENST00000409229 ASXL1Q8IXJ9 1541 aa13.86□□□□□ -0.19
SLC3A1-202ENST00000409229 CLCN6P51797 869 aa13.86□□□□□ -0.19
SLC3A1-202ENST00000409229 PTPN14Q15678 1187 aa13.86□□□□□ -0.19
SLC3A1-202ENST00000409229 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
SLC3A1-202ENST00000409229 PACS2Q86VP3 889 aa13.86□□□□□ -0.19
SLC3A1-202ENST00000409229 TICAM2Q86XR7 235 aa13.86□□□□□ -0.19
SLC3A1-202ENST00000409229 USP27XA6NNY8 438 aa13.86□□□□□ -0.19
SLC3A1-202ENST00000409229 SLU7O95391 586 aaKnown RBP13.86□□□□□ -0.19
SLC3A1-202ENST00000409229 SAMD9Q5K651 1589 aa13.86□□□□□ -0.19
SLC3A1-202ENST00000409229 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
SLC3A1-202ENST00000409229 FAM212AQ96EL1 285 aa13.85□□□□□ -0.19
SLC3A1-202ENST00000409229 TRIM5Q9C035 493 aa13.85□□□□□ -0.19
SLC3A1-202ENST00000409229 TRMT1Q9NXH9 659 aaKnown RBP13.85□□□□□ -0.19
SLC3A1-202ENST00000409229 ANKRD50Q9ULJ7 1429 aa13.85□□□□□ -0.19
SLC3A1-202ENST00000409229 FAM43BQ6ZT52 329 aaPredicted RBP13.85□□□□□ -0.19
SLC3A1-202ENST00000409229 CXorf56Q9H5V9 222 aa13.85□□□□□ -0.19
SLC3A1-202ENST00000409229 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
SLC3A1-202ENST00000409229 FIBPO43427 364 aa13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 NOM1Q5C9Z4 860 aaKnown RBP13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 INTS3Q68E01 1043 aaKnown RBP13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 LUZP1Q86V48 1076 aa13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 GCC1Q96CN9 775 aa13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 ATP2B1P20020 1258 aa13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 TSGA10IPQ3SY00 556 aa13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 CACTINQ8WUQ7 758 aaKnown RBP13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 CFAP74Q9C0B2 1584 aa13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 TRPM1Q7Z4N2 1603 aa13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 EGFL6Q8IUX8 553 aa13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 CFDP1Q9UEE9 299 aaPredicted RBP13.84□□□□□ -0.19
SLC3A1-202ENST00000409229 LMAN1P49257 510 aa13.83□□□□□ -0.2
SLC3A1-202ENST00000409229 H2AFXP16104 143 aaPredicted RBP13.83□□□□□ -0.2
SLC3A1-202ENST00000409229 FUCA2Q9BTY2 467 aa13.83□□□□□ -0.2
SLC3A1-202ENST00000409229 ERBB3P21860 1342 aa13.83□□□□□ -0.2
SLC3A1-202ENST00000409229 TDO2P48775 406 aa13.82□□□□□ -0.2
SLC3A1-202ENST00000409229 SUFUQ9UMX1 484 aa13.82□□□□□ -0.2
SLC3A1-202ENST00000409229 CCDC192P0DO97 292 aa13.82□□□□□ -0.2
SLC3A1-202ENST00000409229 ARHGAP29Q52LW3 1261 aa13.82□□□□□ -0.2
SLC3A1-202ENST00000409229 TMCO3Q6UWJ1 677 aa13.82□□□□□ -0.2
SLC3A1-202ENST00000409229 DONSONQ9NYP3 566 aa13.82□□□□□ -0.2
SLC3A1-202ENST00000409229 CHMP3Q9Y3E7 222 aa13.82□□□□□ -0.2
SLC3A1-202ENST00000409229 SATB1Q01826 763 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 CCDC27Q2M243 656 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 CCDC91Q7Z6B0 441 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 C16orf71Q8IYS4 520 aaPredicted RBP13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 LRRN4CLQ8ND94 238 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 FBXO18Q8NFZ0 1043 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 SRCIN1Q9C0H9 1055 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 OAS2P29728 719 aaKnown RBP13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 UBE2HP62256 183 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 CASC1Q6TDU7 716 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 PLEKHM2Q8IWE5 1019 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 TCHHQ07283 1943 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 CCDC141Q6ZP82 1450 aa13.81□□□□□ -0.2
SLC3A1-202ENST00000409229 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
SLC3A1-202ENST00000409229 GOLGA5Q8TBA6 731 aa13.8□□□□□ -0.2
SLC3A1-202ENST00000409229 CEP170Q5SW79 1584 aa13.8□□□□□ -0.2
SLC3A1-202ENST00000409229 WDR33Q9C0J8 1336 aaKnown RBP13.8□□□□□ -0.2
SLC3A1-202ENST00000409229 ANKRD65E5RJM6 399 aa13.8□□□□□ -0.2
SLC3A1-202ENST00000409229 SEC31AO94979 1220 aaKnown RBP13.8□□□□□ -0.2
SLC3A1-202ENST00000409229 ARID5BQ14865 1188 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms