RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TMC1Q8TDI8 760 aa13□□□□□ -0.33
NIF3L1-203ENST00000409129 LRRC4BQ9NT99 713 aa13□□□□□ -0.33
NIF3L1-203ENST00000409129 TNS2Q63HR2 1409 aa12.99□□□□□ -0.33
NIF3L1-203ENST00000409129 CCDC7Q96M83 1385 aa12.99□□□□□ -0.33
NIF3L1-203ENST00000409129 HDGFL2Q7Z4V5 671 aaPredicted RBP12.99□□□□□ -0.33
NIF3L1-203ENST00000409129 NME9Q86XW9 330 aa12.99□□□□□ -0.33
NIF3L1-203ENST00000409129 SLC12A5Q9H2X9 1139 aa12.99□□□□□ -0.33
NIF3L1-203ENST00000409129 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
NIF3L1-203ENST00000409129 CAPN15O75808 1086 aa12.98□□□□□ -0.33
NIF3L1-203ENST00000409129 PUS7Q96PZ0 661 aaKnown RBP12.98□□□□□ -0.33
NIF3L1-203ENST00000409129 GPBP1L1Q9HC44 474 aaPredicted RBP12.98□□□□□ -0.33
NIF3L1-203ENST00000409129 ABCC6O95255 1503 aa12.98□□□□□ -0.33
NIF3L1-203ENST00000409129 TONSLQ96HA7 1378 aa12.97□□□□□ -0.33
NIF3L1-203ENST00000409129 LY75O60449 1722 aa12.97□□□□□ -0.33
NIF3L1-203ENST00000409129 MON2Q7Z3U7 1717 aa12.97□□□□□ -0.33
NIF3L1-203ENST00000409129 PNPLA7Q6ZV29 1317 aa12.97□□□□□ -0.33
NIF3L1-203ENST00000409129 TERF2IPQ9NYB0 399 aa12.97□□□□□ -0.33
NIF3L1-203ENST00000409129 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
NIF3L1-203ENST00000409129 ADCY9O60503 1353 aa12.96□□□□□ -0.33
NIF3L1-203ENST00000409129 KCNQ4P56696 695 aa12.96□□□□□ -0.33
NIF3L1-203ENST00000409129 NLRP2Q9NX02 1062 aa12.96□□□□□ -0.33
NIF3L1-203ENST00000409129 WDR90Q96KV7 1748 aa12.96□□□□□ -0.34
NIF3L1-203ENST00000409129 ERBB3P21860 1342 aa12.95□□□□□ -0.34
NIF3L1-203ENST00000409129 LTN1O94822 1766 aa12.95□□□□□ -0.34
NIF3L1-203ENST00000409129 POLD1P28340 1107 aa12.95□□□□□ -0.34
NIF3L1-203ENST00000409129 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
NIF3L1-203ENST00000409129 DOT1LQ8TEK3 1739 aa12.95□□□□□ -0.34
NIF3L1-203ENST00000409129 EDC4Q6P2E9 1401 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-203ENST00000409129 IL2RBP14784 551 aa12.94□□□□□ -0.34
NIF3L1-203ENST00000409129 DSG3P32926 999 aa12.94□□□□□ -0.34
NIF3L1-203ENST00000409129 ANKRD24Q8TF21 1146 aa12.94□□□□□ -0.34
NIF3L1-203ENST00000409129 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
NIF3L1-203ENST00000409129 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
NIF3L1-203ENST00000409129 ST20-MTHFSA0A0A6YYL1 179 aa12.92□□□□□ -0.34
NIF3L1-203ENST00000409129 GRIN3BO60391 1043 aa12.92□□□□□ -0.34
NIF3L1-203ENST00000409129 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
NIF3L1-203ENST00000409129 COL13A1Q5TAT6 717 aaPredicted RBP12.92□□□□□ -0.34
NIF3L1-203ENST00000409129 IP6K1Q92551 441 aa12.92□□□□□ -0.34
NIF3L1-203ENST00000409129 TESK2Q96S53 571 aa12.92□□□□□ -0.34
NIF3L1-203ENST00000409129 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
NIF3L1-203ENST00000409129 PCNTO95613 3336 aa12.9□□□□□ -0.34
NIF3L1-203ENST00000409129 KIF3CO14782 793 aa12.9□□□□□ -0.34
NIF3L1-203ENST00000409129 MSL1Q68DK7 614 aa12.9□□□□□ -0.34
NIF3L1-203ENST00000409129 SLC16A10Q8TF71 515 aa12.9□□□□□ -0.34
NIF3L1-203ENST00000409129 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
NIF3L1-203ENST00000409129 DNAJC5GQ8N7S2 189 aa12.89□□□□□ -0.35
NIF3L1-203ENST00000409129 COG3Q96JB2 828 aa12.89□□□□□ -0.35
NIF3L1-203ENST00000409129 TFCP2L1Q9NZI6 479 aa12.89□□□□□ -0.35
NIF3L1-203ENST00000409129 LTV1Q96GA3 475 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-203ENST00000409129 C5P01031 1676 aa12.88□□□□□ -0.35
NIF3L1-203ENST00000409129 RGPD2P0DJD1 1756 aa12.88□□□□□ -0.35
NIF3L1-203ENST00000409129 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
NIF3L1-203ENST00000409129 MAP3K19Q56UN5 1328 aa12.87□□□□□ -0.35
NIF3L1-203ENST00000409129 FBLN1P23142 703 aa12.86□□□□□ -0.35
NIF3L1-203ENST00000409129 HOXC9P31274 260 aa12.86□□□□□ -0.35
NIF3L1-203ENST00000409129 AMPHP49418 695 aa12.86□□□□□ -0.35
NIF3L1-203ENST00000409129 HTRA3P83110 453 aa12.86□□□□□ -0.35
NIF3L1-203ENST00000409129 APLP1P51693 650 aa12.85□□□□□ -0.35
NIF3L1-203ENST00000409129 COL23A1Q86Y22 540 aaPredicted RBP12.85□□□□□ -0.35
NIF3L1-203ENST00000409129 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
NIF3L1-203ENST00000409129 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
NIF3L1-203ENST00000409129 ANKRD36BQ8N2N9 1353 aa12.84□□□□□ -0.35
NIF3L1-203ENST00000409129 TMF1P82094 1093 aa12.84□□□□□ -0.35
NIF3L1-203ENST00000409129 FYB1O15117 783 aa12.83□□□□□ -0.36
NIF3L1-203ENST00000409129 TRIM26Q12899 539 aaPredicted RBP12.83□□□□□ -0.36
NIF3L1-203ENST00000409129 SLC27A3Q5K4L6 730 aa12.83□□□□□ -0.36
NIF3L1-203ENST00000409129 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
NIF3L1-203ENST00000409129 NSD2O96028 1365 aa12.82□□□□□ -0.36
NIF3L1-203ENST00000409129 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
NIF3L1-203ENST00000409129 UBR3Q6ZT12 1888 aa12.82□□□□□ -0.36
NIF3L1-203ENST00000409129 KIAA1551Q9HCM1 1747 aa12.82□□□□□ -0.36
NIF3L1-203ENST00000409129 CICQ96RK0 1608 aaPredicted RBP12.81□□□□□ -0.36
NIF3L1-203ENST00000409129 FAM208AQ9UK61 1670 aaKnown RBP12.81□□□□□ -0.36
NIF3L1-203ENST00000409129 PRIM1P49642 420 aaKnown RBP12.81□□□□□ -0.36
NIF3L1-203ENST00000409129 RRS1Q15050 365 aaKnown RBP12.81□□□□□ -0.36
NIF3L1-203ENST00000409129 NBPF6Q5VWK0 638 aa12.81□□□□□ -0.36
NIF3L1-203ENST00000409129 TNS4Q8IZW8 715 aa12.81□□□□□ -0.36
NIF3L1-203ENST00000409129 SYTL4Q96C24 671 aaPredicted RBP12.81□□□□□ -0.36
NIF3L1-203ENST00000409129 NBPF4Q96M43 638 aa12.81□□□□□ -0.36
NIF3L1-203ENST00000409129 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
NIF3L1-203ENST00000409129 USP47Q96K76 1375 aa12.81□□□□□ -0.36
NIF3L1-203ENST00000409129 PRELPP51888 382 aa12.8□□□□□ -0.36
NIF3L1-203ENST00000409129 CDCA8Q53HL2 280 aa12.8□□□□□ -0.36
NIF3L1-203ENST00000409129 IGSF1Q8N6C5 1336 aa12.8□□□□□ -0.36
NIF3L1-203ENST00000409129 USHBP1Q8N6Y0 703 aa12.78□□□□□ -0.36
NIF3L1-203ENST00000409129 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
NIF3L1-203ENST00000409129 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
NIF3L1-203ENST00000409129 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
NIF3L1-203ENST00000409129 CGNL1Q0VF96 1302 aa12.78□□□□□ -0.36
NIF3L1-203ENST00000409129 BRCA1P38398 1863 aaKnown RBP12.78□□□□□ -0.36
NIF3L1-203ENST00000409129 MEGF6O75095 1541 aa12.78□□□□□ -0.36
NIF3L1-203ENST00000409129 C4BP0C0L5 1744 aa12.77□□□□□ -0.36
NIF3L1-203ENST00000409129 ITGB4P16144 1822 aa12.77□□□□□ -0.37
NIF3L1-203ENST00000409129 KIF13BQ9NQT8 1826 aa12.77□□□□□ -0.37
NIF3L1-203ENST00000409129 HSP90AB2PQ58FF8 381 aa12.77□□□□□ -0.37
NIF3L1-203ENST00000409129 SMIM5Q71RC9 77 aa12.77□□□□□ -0.37
NIF3L1-203ENST00000409129 RAPGEF4Q8WZA2 1011 aa12.77□□□□□ -0.37
NIF3L1-203ENST00000409129 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
NIF3L1-203ENST00000409129 TOMM70O94826 608 aa12.76□□□□□ -0.37
NIF3L1-203ENST00000409129 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms