RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 PDE3BQ13370 1112 aa22.47■■□□□ 1.19
HMGA1P7-201ENST00000406908 PARP4Q9UKK3 1724 aaKnown RBP22.47■■□□□ 1.19
HMGA1P7-201ENST00000406908 OVOS2A0A0G2JMS6 1433 aa22.47■■□□□ 1.19
HMGA1P7-201ENST00000406908 FAM182BQ5T319 152 aa22.46■■□□□ 1.19
HMGA1P7-201ENST00000406908 ZCRB1Q8TBF4 217 aaKnown RBP22.46■■□□□ 1.19
HMGA1P7-201ENST00000406908 MARCH10Q8NA82 808 aaPredicted RBP22.45■■□□□ 1.18
HMGA1P7-201ENST00000406908 LRRC37A3O60309 1634 aa22.45■■□□□ 1.18
HMGA1P7-201ENST00000406908 TNS2Q63HR2 1409 aa22.44■■□□□ 1.18
HMGA1P7-201ENST00000406908 DDX54Q8TDD1 881 aaKnown RBP22.43■■□□□ 1.18
HMGA1P7-201ENST00000406908 RSPH6AQ9H0K4 717 aa22.43■■□□□ 1.18
HMGA1P7-201ENST00000406908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.42■■□□□ 1.18
HMGA1P7-201ENST00000406908 FCHSD2O94868 740 aa22.41■■□□□ 1.18
HMGA1P7-201ENST00000406908 MRS2Q9HD23 443 aa22.41■■□□□ 1.18
HMGA1P7-201ENST00000406908 SPG7Q9UQ90 795 aa22.41■■□□□ 1.18
HMGA1P7-201ENST00000406908 PRKAR2BP31323 418 aa22.4■■□□□ 1.18
HMGA1P7-201ENST00000406908 PLEKHO1Q53GL0 409 aaPredicted RBP22.4■■□□□ 1.18
HMGA1P7-201ENST00000406908 CYP27B1O15528 508 aa22.39■■□□□ 1.17
HMGA1P7-201ENST00000406908 AMOTQ4VCS5 1084 aa22.38■■□□□ 1.17
HMGA1P7-201ENST00000406908 MIER1Q8N108 512 aa22.38■■□□□ 1.17
HMGA1P7-201ENST00000406908 ADAMTS8Q9UP79 889 aa22.38■■□□□ 1.17
HMGA1P7-201ENST00000406908 PLEKHG2Q9H7P9 1386 aa22.38■■□□□ 1.17
HMGA1P7-201ENST00000406908 WDR43Q15061 677 aaKnown RBP eCLIP22.37■■□□□ 1.17
HMGA1P7-201ENST00000406908 PNISRQ8TF01 805 aaKnown RBP22.37■■□□□ 1.17
HMGA1P7-201ENST00000406908 PHACTR3Q96KR7 559 aa22.37■■□□□ 1.17
HMGA1P7-201ENST00000406908 SHANK3Q9BYB0 1731 aa22.37■■□□□ 1.17
HMGA1P7-201ENST00000406908 PCDH11XQ9BZA7 1347 aa22.36■■□□□ 1.17
HMGA1P7-201ENST00000406908 PCDH11YQ9BZA8 1340 aa22.36■■□□□ 1.17
HMGA1P7-201ENST00000406908 MTHFSDQ2M296 383 aaKnown RBP22.36■■□□□ 1.17
HMGA1P7-201ENST00000406908 FAM196AQ6ZSG2 479 aa22.36■■□□□ 1.17
HMGA1P7-201ENST00000406908 PKD1L3Q7Z443 1732 aa22.36■■□□□ 1.17
HMGA1P7-201ENST00000406908 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
HMGA1P7-201ENST00000406908 PHKG2P15735 406 aa22.34■■□□□ 1.17
HMGA1P7-201ENST00000406908 ZNF530Q6P9A1 599 aaPredicted RBP22.34■■□□□ 1.17
HMGA1P7-201ENST00000406908 IFNL2Q8IZJ0 200 aa22.34■■□□□ 1.17
HMGA1P7-201ENST00000406908 CCER2I3L3R5 266 aa22.32■■□□□ 1.16
HMGA1P7-201ENST00000406908 NKX1-1Q15270 411 aaPredicted RBP22.32■■□□□ 1.16
HMGA1P7-201ENST00000406908 BCL9O00512 1426 aa22.31■■□□□ 1.16
HMGA1P7-201ENST00000406908 PNNQ9H307 717 aaKnown RBP22.31■■□□□ 1.16
HMGA1P7-201ENST00000406908 CCDC146Q8IYE0 955 aa22.3■■□□□ 1.16
HMGA1P7-201ENST00000406908 ACSBG1Q96GR2 724 aa22.3■■□□□ 1.16
HMGA1P7-201ENST00000406908 AKAP4Q5JQC9 854 aa22.29■■□□□ 1.16
HMGA1P7-201ENST00000406908 C1orf141Q5JVX7 400 aa22.29■■□□□ 1.16
HMGA1P7-201ENST00000406908 GAS2L2Q8NHY3 880 aa22.29■■□□□ 1.16
HMGA1P7-201ENST00000406908 KCNQ2O43526 872 aa22.28■■□□□ 1.16
HMGA1P7-201ENST00000406908 TRIM37O94972 964 aa22.28■■□□□ 1.16
HMGA1P7-201ENST00000406908 PTF1AQ7RTS3 328 aa22.28■■□□□ 1.16
HMGA1P7-201ENST00000406908 KAT6BQ8WYB5 2073 aa22.27■■□□□ 1.16
HMGA1P7-201ENST00000406908 NEFMP07197 916 aa22.27■■□□□ 1.16
HMGA1P7-201ENST00000406908 UPF1Q92900 1129 aaKnown RBP eCLIP22.27■■□□□ 1.16
HMGA1P7-201ENST00000406908 HSP90AB1P08238 724 aaKnown RBP22.26■■□□□ 1.15
HMGA1P7-201ENST00000406908 PRIM1P49642 420 aaKnown RBP22.26■■□□□ 1.15
HMGA1P7-201ENST00000406908 MPRIPQ6WCQ1 1025 aa22.26■■□□□ 1.15
HMGA1P7-201ENST00000406908 RUNDC1Q96C34 613 aa22.26■■□□□ 1.15
HMGA1P7-201ENST00000406908 MAPK8IP3Q9UPT6 1336 aa22.26■■□□□ 1.15
HMGA1P7-201ENST00000406908 FAM9BQ8IZU0 186 aa22.25■■□□□ 1.15
HMGA1P7-201ENST00000406908 DCAF5Q96JK2 942 aa22.25■■□□□ 1.15
HMGA1P7-201ENST00000406908 LGR6Q9HBX8 967 aa22.24■■□□□ 1.15
HMGA1P7-201ENST00000406908 SBF2Q86WG5 1849 aa22.24■■□□□ 1.15
HMGA1P7-201ENST00000406908 KDM6AO15550 1401 aaPredicted RBP22.23■■□□□ 1.15
HMGA1P7-201ENST00000406908 NFE2L2Q16236 605 aa22.23■■□□□ 1.15
HMGA1P7-201ENST00000406908 BCL11BQ9C0K0 894 aaPredicted RBP22.23■■□□□ 1.15
HMGA1P7-201ENST00000406908 GNAT3A8MTJ3 354 aa22.22■■□□□ 1.15
HMGA1P7-201ENST00000406908 IL17REQ8NFR9 667 aa22.22■■□□□ 1.15
HMGA1P7-201ENST00000406908 SYTL4Q96C24 671 aaPredicted RBP22.22■■□□□ 1.15
HMGA1P7-201ENST00000406908 MAP3K5Q99683 1374 aa22.22■■□□□ 1.15
HMGA1P7-201ENST00000406908 RNMTO43148 476 aaKnown RBP22.21■■□□□ 1.15
HMGA1P7-201ENST00000406908 TMPOP42166 694 aaKnown RBP22.21■■□□□ 1.15
HMGA1P7-201ENST00000406908 CCDC125Q86Z20 511 aa22.21■■□□□ 1.15
HMGA1P7-201ENST00000406908 RRP7AQ9Y3A4 280 aaKnown RBP22.2■■□□□ 1.14
HMGA1P7-201ENST00000406908 EP400Q96L91 3159 aa22.19■■□□□ 1.14
HMGA1P7-201ENST00000406908 ERVV-2B6SEH9 535 aa22.19■■□□□ 1.14
HMGA1P7-201ENST00000406908 SOCS7O14512 581 aa22.19■■□□□ 1.14
HMGA1P7-201ENST00000406908 APAF1O14727 1248 aa22.19■■□□□ 1.14
HMGA1P7-201ENST00000406908 DOT1LQ8TEK3 1739 aa22.19■■□□□ 1.14
HMGA1P7-201ENST00000406908 TOGARAM1Q9Y4F4 1720 aa22.19■■□□□ 1.14
HMGA1P7-201ENST00000406908 APBA3O96018 575 aa22.18■■□□□ 1.14
HMGA1P7-201ENST00000406908 RIPK4P57078 832 aa22.18■■□□□ 1.14
HMGA1P7-201ENST00000406908 NHSQ6T4R5 1651 aa22.17■■□□□ 1.14
HMGA1P7-201ENST00000406908 HTATSF1O43719 755 aaKnown RBP22.17■■□□□ 1.14
HMGA1P7-201ENST00000406908 DCTN1Q14203 1278 aa22.17■■□□□ 1.14
HMGA1P7-201ENST00000406908 NEUROD2Q15784 382 aa22.17■■□□□ 1.14
HMGA1P7-201ENST00000406908 PIGBQ92521 554 aa22.17■■□□□ 1.14
HMGA1P7-201ENST00000406908 CABP4P57796 275 aa22.16■■□□□ 1.14
HMGA1P7-201ENST00000406908 SF3B2Q13435 895 aaKnown RBP22.16■■□□□ 1.14
HMGA1P7-201ENST00000406908 MCM10Q7L590 875 aa22.16■■□□□ 1.14
HMGA1P7-201ENST00000406908 RTF1Q92541 710 aaKnown RBP22.16■■□□□ 1.14
HMGA1P7-201ENST00000406908 TMOD3Q9NYL9 352 aa22.16■■□□□ 1.14
HMGA1P7-201ENST00000406908 SENP3-EIF4A1A0A087X0R7 540 aa22.15■■□□□ 1.14
HMGA1P7-201ENST00000406908 DEFB132Q7Z7B7 95 aa22.15■■□□□ 1.14
HMGA1P7-201ENST00000406908 NFATC2IPQ8NCF5 419 aa22.15■■□□□ 1.14
HMGA1P7-201ENST00000406908 ITGB4P16144 1822 aa22.15■■□□□ 1.14
HMGA1P7-201ENST00000406908 SCN11AQ9UI33 1791 aa22.15■■□□□ 1.14
HMGA1P7-201ENST00000406908 SLC52A2Q9HAB3 445 aa22.14■■□□□ 1.13
HMGA1P7-201ENST00000406908 TNS1Q9HBL0 1735 aaKnown RBP22.14■■□□□ 1.13
HMGA1P7-201ENST00000406908 ADAMTS7Q9UKP4 1686 aa22.14■■□□□ 1.13
HMGA1P7-201ENST00000406908 DLG5Q8TDM6 1919 aa22.14■■□□□ 1.13
HMGA1P7-201ENST00000406908 CEMIPQ8WUJ3 1361 aa22.13■■□□□ 1.13
HMGA1P7-201ENST00000406908 PLSCR1O15162 318 aa22.12■■□□□ 1.13
HMGA1P7-201ENST00000406908 BAG6P46379 1132 aa22.12■■□□□ 1.13
HMGA1P7-201ENST00000406908 EN1Q05925 392 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms