RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 ERC2O15083 957 aa10.73□□□□□ -0.69
PSEN1-205ENST00000406768 URI1O94763 535 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-205ENST00000406768 CDR1P51861 262 aa10.73□□□□□ -0.69
PSEN1-205ENST00000406768 SARNPP82979 210 aaKnown RBP10.73□□□□□ -0.69
PSEN1-205ENST00000406768 NCBP1Q09161 790 aaKnown RBP10.73□□□□□ -0.69
PSEN1-205ENST00000406768 HDAC1Q13547 482 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-205ENST00000406768 C14orf37Q86TY3 774 aa10.73□□□□□ -0.69
PSEN1-205ENST00000406768 ZGPATQ8N5A5 531 aaKnown RBP10.73□□□□□ -0.69
PSEN1-205ENST00000406768 FEZ2Q9UHY8 353 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-205ENST00000406768 SNW1Q13573 536 aaKnown RBP10.72□□□□□ -0.69
PSEN1-205ENST00000406768 HOMEZQ8IX15 550 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 GPT2Q8TD30 523 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 ADCY10Q96PN6 1610 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 UBE2HP62256 183 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 WDR63Q8IWG1 891 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 NOB1Q9ULX3 412 aaKnown RBP10.72□□□□□ -0.69
PSEN1-205ENST00000406768 MORC2Q9Y6X9 1032 aaPredicted RBP10.72□□□□□ -0.69
PSEN1-205ENST00000406768 UHRF1BP1LA0JNW5 1464 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 MYO1CO00159 1063 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 SLFN14P0C7P3 912 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 LRCH2Q5VUJ6 765 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 KIAA1524Q8TCG1 905 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 ARFGAP3Q9NP61 516 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 PTPN23Q9H3S7 1636 aa10.72□□□□□ -0.69
PSEN1-205ENST00000406768 EXOSC9Q06265 439 aaKnown RBP10.71□□□□□ -0.69
PSEN1-205ENST00000406768 USP48Q86UV5 1035 aa10.71□□□□□ -0.69
PSEN1-205ENST00000406768 NAT10Q9H0A0 1025 aaKnown RBP10.71□□□□□ -0.69
PSEN1-205ENST00000406768 ARHGEF11O15085 1522 aa10.71□□□□□ -0.69
PSEN1-205ENST00000406768 DHX8Q14562 1220 aaKnown RBP10.71□□□□□ -0.69
PSEN1-205ENST00000406768 SYT10Q6XYQ8 523 aa10.71□□□□□ -0.69
PSEN1-205ENST00000406768 FAM200AQ8TCP9 573 aa10.71□□□□□ -0.69
PSEN1-205ENST00000406768 C1orf115Q9H7X2 142 aa10.71□□□□□ -0.69
PSEN1-205ENST00000406768 CEP83Q9Y592 693 aa10.71□□□□□ -0.69
PSEN1-205ENST00000406768 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.7
PSEN1-205ENST00000406768 CAMK4Q16566 473 aa10.71□□□□□ -0.7
PSEN1-205ENST00000406768 FAM177A1Q8N128 213 aaPredicted RBP10.71□□□□□ -0.7
PSEN1-205ENST00000406768 FBXW7Q969H0 707 aa10.71□□□□□ -0.7
PSEN1-205ENST00000406768 CCDC144AA2RUR9 1427 aa10.71□□□□□ -0.7
PSEN1-205ENST00000406768 SKILP12757 684 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 ZNF215Q9UL58 517 aaPredicted RBP10.7□□□□□ -0.7
PSEN1-205ENST00000406768 DHX16O60231 1041 aaKnown RBP10.7□□□□□ -0.7
PSEN1-205ENST00000406768 CT47B1P0C2W7 299 aaPredicted RBP10.7□□□□□ -0.7
PSEN1-205ENST00000406768 CCDC172P0C7W6 258 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 CASTP20810 708 aaKnown RBP10.7□□□□□ -0.7
PSEN1-205ENST00000406768 IBSPP21815 317 aaPredicted RBP10.7□□□□□ -0.7
PSEN1-205ENST00000406768 OSCARQ8IYS5 282 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 PYCARDQ9ULZ3 195 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 LRRIQ1Q96JM4 1722 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 PTPRGP23470 1445 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 NF2P35240 595 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 KRT85P78386 507 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 GBP6Q6ZN66 633 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 TMEM57Q8N5G2 664 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 ANKRD7Q92527 254 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 CENPHQ9H3R5 247 aa10.7□□□□□ -0.7
PSEN1-205ENST00000406768 RLBP1P12271 317 aa10.69□□□□□ -0.7
PSEN1-205ENST00000406768 RRP15Q9Y3B9 282 aaKnown RBP10.69□□□□□ -0.7
PSEN1-205ENST00000406768 NUP153P49790 1475 aaKnown RBP10.69□□□□□ -0.7
PSEN1-205ENST00000406768 NUCB1Q02818 461 aa10.69□□□□□ -0.7
PSEN1-205ENST00000406768 CCDC34Q96HJ3 373 aa10.69□□□□□ -0.7
PSEN1-205ENST00000406768 E2F4Q16254 413 aa10.69□□□□□ -0.7
PSEN1-205ENST00000406768 CCDC73Q6ZRK6 1079 aa10.69□□□□□ -0.7
PSEN1-205ENST00000406768 RPAINQ86UA6 219 aa10.69□□□□□ -0.7
PSEN1-205ENST00000406768 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.69□□□□□ -0.7
PSEN1-205ENST00000406768 H3BQV1 296 aa10.69□□□□□ -0.7
PSEN1-205ENST00000406768 ELL2O00472 640 aaPredicted RBP10.69□□□□□ -0.7
PSEN1-205ENST00000406768 IFFO2Q5TF58 517 aa10.69□□□□□ -0.7
PSEN1-205ENST00000406768 TSR2Q969E8 191 aaKnown RBP10.69□□□□□ -0.7
PSEN1-205ENST00000406768 SCAPERQ9BY12 1400 aa10.68□□□□□ -0.7
PSEN1-205ENST00000406768 SFPQP23246 707 aaKnown RBP eCLIP10.68□□□□□ -0.7
PSEN1-205ENST00000406768 ITSN2Q9NZM3 1697 aa10.68□□□□□ -0.7
PSEN1-205ENST00000406768 CKAP2LQ8IYA6 745 aa10.68□□□□□ -0.7
PSEN1-205ENST00000406768 GOLGA5Q8TBA6 731 aa10.68□□□□□ -0.7
PSEN1-205ENST00000406768 TMX3Q96JJ7 454 aa10.68□□□□□ -0.7
PSEN1-205ENST00000406768 ZNF692Q9BU19 519 aaPredicted RBP10.68□□□□□ -0.7
PSEN1-205ENST00000406768 ZNF165P49910 485 aa10.68□□□□□ -0.7
PSEN1-205ENST00000406768 SPTLC3Q9NUV7 552 aa10.68□□□□□ -0.7
PSEN1-205ENST00000406768 TNNQ9UQP3 1299 aa10.68□□□□□ -0.7
PSEN1-205ENST00000406768 ZMYM4Q5VZL5 1548 aa10.67□□□□□ -0.7
PSEN1-205ENST00000406768 ABCC2Q92887 1545 aa10.67□□□□□ -0.7
PSEN1-205ENST00000406768 SF3A1Q15459 793 aaKnown RBP10.67□□□□□ -0.7
PSEN1-205ENST00000406768 OAS2P29728 719 aaKnown RBP10.67□□□□□ -0.7
PSEN1-205ENST00000406768 TROQ12816 1431 aaPredicted RBP10.67□□□□□ -0.7
PSEN1-205ENST00000406768 SHTN1A0MZ66 631 aa10.67□□□□□ -0.7
PSEN1-205ENST00000406768 JAKMIP3Q5VZ66 844 aa10.67□□□□□ -0.7
PSEN1-205ENST00000406768 CYB5RLQ6IPT4 315 aa10.67□□□□□ -0.7
PSEN1-205ENST00000406768 API5Q9BZZ5 524 aaKnown RBP10.67□□□□□ -0.7
PSEN1-205ENST00000406768 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
PSEN1-205ENST00000406768 VPS18Q9P253 973 aa10.67□□□□□ -0.7
PSEN1-205ENST00000406768 PKP1Q13835 747 aa10.66□□□□□ -0.7
PSEN1-205ENST00000406768 INSRP06213 1382 aa10.66□□□□□ -0.7
PSEN1-205ENST00000406768 TRIM27P14373 513 aa10.66□□□□□ -0.7
PSEN1-205ENST00000406768 GSDMDP57764 484 aa10.66□□□□□ -0.7
PSEN1-205ENST00000406768 MCM6Q14566 821 aa10.66□□□□□ -0.7
PSEN1-205ENST00000406768 CCDC70Q6NSX1 233 aa10.66□□□□□ -0.7
PSEN1-205ENST00000406768 RUFY1Q96T51 708 aa10.66□□□□□ -0.7
PSEN1-205ENST00000406768 OS9Q13438 667 aaPredicted RBP10.66□□□□□ -0.7
PSEN1-205ENST00000406768 SART3Q15020 963 aaKnown RBP10.66□□□□□ -0.7
PSEN1-205ENST00000406768 FMNL2Q96PY5 1086 aa10.66□□□□□ -0.7
PSEN1-205ENST00000406768 UPF3BQ9BZI7 483 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms