RNA–Protein interactions for RNA: ENST00000404603.5

SNRPD3-203, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 5

Gene SNRPD3, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-203ENST00000404603 NRAPQ86VF7 1730 aa11.19□□□□□ -0.62
SNRPD3-203ENST00000404603 CNGB1Q14028 1251 aaPredicted RBP11.19□□□□□ -0.62
SNRPD3-203ENST00000404603 RBM6P78332 1123 aaKnown RBP11.18□□□□□ -0.62
SNRPD3-203ENST00000404603 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
SNRPD3-203ENST00000404603 TCP11L2Q8N4U5 519 aa11.18□□□□□ -0.62
SNRPD3-203ENST00000404603 GJD4Q96KN9 370 aaPredicted RBP11.18□□□□□ -0.62
SNRPD3-203ENST00000404603 QTRT2Q9H974 415 aaKnown RBP11.18□□□□□ -0.62
SNRPD3-203ENST00000404603 NLRP2Q9NX02 1062 aa11.18□□□□□ -0.62
SNRPD3-203ENST00000404603 FARP1Q9Y4F1 1045 aaPredicted RBP11.18□□□□□ -0.62
SNRPD3-203ENST00000404603 SPATA31A5Q5VU36 1347 aa11.17□□□□□ -0.62
SNRPD3-203ENST00000404603 SPATA31A7Q8IWB4 1347 aa11.17□□□□□ -0.62
SNRPD3-203ENST00000404603 RXRBP28702 533 aa11.17□□□□□ -0.62
SNRPD3-203ENST00000404603 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
SNRPD3-203ENST00000404603 RAPGEF4Q8WZA2 1011 aa11.17□□□□□ -0.62
SNRPD3-203ENST00000404603 SPATA31A1Q5TZJ5 1347 aa11.16□□□□□ -0.62
SNRPD3-203ENST00000404603 PEAK1Q9H792 1746 aa11.16□□□□□ -0.62
SNRPD3-203ENST00000404603 WDR43Q15061 677 aaKnown RBP eCLIP11.16□□□□□ -0.62
SNRPD3-203ENST00000404603 AXIN2Q9Y2T1 843 aa11.16□□□□□ -0.62
SNRPD3-203ENST00000404603 CCER2I3L3R5 266 aa11.15□□□□□ -0.62
SNRPD3-203ENST00000404603 IL2RBP14784 551 aa11.15□□□□□ -0.62
SNRPD3-203ENST00000404603 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
SNRPD3-203ENST00000404603 EIF4A2Q14240 407 aaKnown RBP11.15□□□□□ -0.62
SNRPD3-203ENST00000404603 LARP1Q6PKG0 1096 aaKnown RBP11.15□□□□□ -0.62
SNRPD3-203ENST00000404603 LTV1Q96GA3 475 aaPredicted RBP11.15□□□□□ -0.62
SNRPD3-203ENST00000404603 IGSF1Q8N6C5 1336 aa11.14□□□□□ -0.63
SNRPD3-203ENST00000404603 TATP17735 454 aaPredicted RBP11.14□□□□□ -0.63
SNRPD3-203ENST00000404603 AMOTQ4VCS5 1084 aa11.14□□□□□ -0.63
SNRPD3-203ENST00000404603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.14□□□□□ -0.634e-7■□□□□ 8.8
SNRPD3-203ENST00000404603 NCAPD2Q15021 1401 aa11.14□□□□□ -0.63
SNRPD3-203ENST00000404603 A0A0G2JS52 829 aa11.13□□□□□ -0.63
SNRPD3-203ENST00000404603 U2SURPO15042 1029 aaKnown RBP11.13□□□□□ -0.63
SNRPD3-203ENST00000404603 FCHSD2O94868 740 aa11.13□□□□□ -0.63
SNRPD3-203ENST00000404603 FBLN1P23142 703 aa11.13□□□□□ -0.63
SNRPD3-203ENST00000404603 IL13P35225 146 aa11.13□□□□□ -0.63
SNRPD3-203ENST00000404603 MYT1Q01538 1121 aa11.13□□□□□ -0.63
SNRPD3-203ENST00000404603 KDRP35968 1356 aa11.13□□□□□ -0.63
SNRPD3-203ENST00000404603 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
SNRPD3-203ENST00000404603 PARP4Q9UKK3 1724 aaKnown RBP11.12□□□□□ -0.63
SNRPD3-203ENST00000404603 ONECUT3O60422 494 aaPredicted RBP11.12□□□□□ -0.63
SNRPD3-203ENST00000404603 U2AF1L5P0DN76 240 aaPredicted RBP11.12□□□□□ -0.63
SNRPD3-203ENST00000404603 U2AF1Q01081 240 aaKnown RBP eCLIP11.12□□□□□ -0.63
SNRPD3-203ENST00000404603 MRS2Q9HD23 443 aa11.12□□□□□ -0.63
SNRPD3-203ENST00000404603 USP35Q9P2H5 1018 aa11.12□□□□□ -0.63
SNRPD3-203ENST00000404603 SPG7Q9UQ90 795 aa11.12□□□□□ -0.63
SNRPD3-203ENST00000404603 RGS12O14924 1447 aa11.11□□□□□ -0.63
SNRPD3-203ENST00000404603 RGPD5Q99666 1765 aa11.11□□□□□ -0.63
SNRPD3-203ENST00000404603 SOCS7O14512 581 aa11.11□□□□□ -0.63
SNRPD3-203ENST00000404603 DDB1Q16531 1140 aa11.11□□□□□ -0.63
SNRPD3-203ENST00000404603 NBPF6Q5VWK0 638 aa11.11□□□□□ -0.63
SNRPD3-203ENST00000404603 NBPF4Q96M43 638 aa11.11□□□□□ -0.63
SNRPD3-203ENST00000404603 EYA1Q99502 592 aa11.11□□□□□ -0.63
SNRPD3-203ENST00000404603 PCDH11XQ9BZA7 1347 aa11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 PCDH11YQ9BZA8 1340 aa11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 MAPK8IP3Q9UPT6 1336 aa11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 OVOS2A0A0G2JMS6 1433 aa11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 RGPD1P0DJD0 1748 aa11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 EXOC5O00471 708 aa11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 HSP90AB1P08238 724 aaKnown RBP11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 PDE3BQ13370 1112 aa11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 PLEKHO1Q53GL0 409 aaPredicted RBP11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 SULT6B1Q6IMI4 303 aa11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 GLI3P10071 1580 aa11.1□□□□□ -0.63
SNRPD3-203ENST00000404603 TNS2Q63HR2 1409 aa11.09□□□□□ -0.63
SNRPD3-203ENST00000404603 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
SNRPD3-203ENST00000404603 HMGB2P26583 209 aaKnown RBP11.09□□□□□ -0.63
SNRPD3-203ENST00000404603 NGEFQ8N5V2 710 aa11.09□□□□□ -0.63
SNRPD3-203ENST00000404603 GAS2L2Q8NHY3 880 aa11.09□□□□□ -0.63
SNRPD3-203ENST00000404603 WNK3Q9BYP7 1800 aa11.09□□□□□ -0.63
SNRPD3-203ENST00000404603 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
SNRPD3-203ENST00000404603 THSD7AQ9UPZ6 1657 aa11.08□□□□□ -0.64
SNRPD3-203ENST00000404603 C1orf141Q5JVX7 400 aa11.08□□□□□ -0.64
SNRPD3-203ENST00000404603 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.64
SNRPD3-203ENST00000404603 LMOD3Q0VAK6 560 aa11.07□□□□□ -0.64
SNRPD3-203ENST00000404603 SEPT12Q8IYM1 358 aa11.07□□□□□ -0.64
SNRPD3-203ENST00000404603 KRT27Q7Z3Y8 459 aa11.06□□□□□ -0.64
SNRPD3-203ENST00000404603 BCL9O00512 1426 aa11.06□□□□□ -0.64
SNRPD3-203ENST00000404603 HMOX1P09601 288 aa11.05□□□□□ -0.64
SNRPD3-203ENST00000404603 FAM196AQ6ZSG2 479 aa11.05□□□□□ -0.64
SNRPD3-203ENST00000404603 PKD1L3Q7Z443 1732 aa11.05□□□□□ -0.64
SNRPD3-203ENST00000404603 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
SNRPD3-203ENST00000404603 USHBP1Q8N6Y0 703 aa11.05□□□□□ -0.64
SNRPD3-203ENST00000404603 RUNDC1Q96C34 613 aa11.05□□□□□ -0.64
SNRPD3-203ENST00000404603 RSPH6AQ9H0K4 717 aa11.05□□□□□ -0.64
SNRPD3-203ENST00000404603 CREBZFQ9NS37 354 aa11.05□□□□□ -0.64
SNRPD3-203ENST00000404603 LRRC37A3O60309 1634 aa11.05□□□□□ -0.64
SNRPD3-203ENST00000404603 MEGF6O75095 1541 aa11.04□□□□□ -0.64
SNRPD3-203ENST00000404603 HTATSF1O43719 755 aaKnown RBP11.04□□□□□ -0.64
SNRPD3-203ENST00000404603 PRKAR2BP31323 418 aa11.04□□□□□ -0.64
SNRPD3-203ENST00000404603 CALD1Q05682 793 aaKnown RBP11.04□□□□□ -0.64
SNRPD3-203ENST00000404603 RTF1Q92541 710 aaKnown RBP11.04□□□□□ -0.64
SNRPD3-203ENST00000404603 EP400Q96L91 3159 aa11.04□□□□□ -0.64
SNRPD3-203ENST00000404603 AKAP4Q5JQC9 854 aa11.03□□□□□ -0.64
SNRPD3-203ENST00000404603 ZNF530Q6P9A1 599 aaPredicted RBP11.03□□□□□ -0.64
SNRPD3-203ENST00000404603 PNISRQ8TF01 805 aaKnown RBP11.03□□□□□ -0.64
SNRPD3-203ENST00000404603 DCAF5Q96JK2 942 aa11.03□□□□□ -0.64
SNRPD3-203ENST00000404603 RGPD2P0DJD1 1756 aa11.03□□□□□ -0.64
SNRPD3-203ENST00000404603 CCDC125Q86Z20 511 aa11.02□□□□□ -0.65
SNRPD3-203ENST00000404603 GNAT3A8MTJ3 354 aa11.01□□□□□ -0.65
SNRPD3-203ENST00000404603 SF3B2Q13435 895 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms