RNA–Protein interactions for RNA: ENST00000400814.3

PRAMEF1-202, Transcript of PRAME family member 1, humanhuman

TSL 1 (best)

Gene PRAMEF1, Length 1,327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-202ENST00000400814 TRAK1Q9UPV9 953 aa13.31□□□□□ -0.28
PRAMEF1-202ENST00000400814 SBNO2Q9Y2G9 1366 aa13.3□□□□□ -0.28
PRAMEF1-202ENST00000400814 YTHDC2Q9H6S0 1430 aaKnown RBP13.3□□□□□ -0.28
PRAMEF1-202ENST00000400814 NUDT7P0C024 238 aa13.3□□□□□ -0.28
PRAMEF1-202ENST00000400814 RIC3Q7Z5B4 369 aa13.3□□□□□ -0.28
PRAMEF1-202ENST00000400814 ANKLE2Q86XL3 938 aa13.3□□□□□ -0.28
PRAMEF1-202ENST00000400814 TBX22Q9Y458 520 aa13.3□□□□□ -0.28
PRAMEF1-202ENST00000400814 TMF1P82094 1093 aa13.29□□□□□ -0.28
PRAMEF1-202ENST00000400814 SIRT1Q96EB6 747 aa13.29□□□□□ -0.28
PRAMEF1-202ENST00000400814 CENPJQ9HC77 1338 aaPredicted RBP13.29□□□□□ -0.28
PRAMEF1-202ENST00000400814 METP08581 1390 aa13.29□□□□□ -0.28
PRAMEF1-202ENST00000400814 LRPPRCP42704 1394 aaKnown RBP13.29□□□□□ -0.28
PRAMEF1-202ENST00000400814 ABCC11Q96J66 1382 aa13.29□□□□□ -0.28
PRAMEF1-202ENST00000400814 RCCD1A6NED2 376 aa13.27□□□□□ -0.29
PRAMEF1-202ENST00000400814 CD46P15529 392 aa13.27□□□□□ -0.29
PRAMEF1-202ENST00000400814 TUSC1Q2TAM9 212 aa13.27□□□□□ -0.29
PRAMEF1-202ENST00000400814 KHSRPQ92945 711 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRAMEF1-202ENST00000400814 PLSCR2Q9NRY7 297 aa13.27□□□□□ -0.29
PRAMEF1-202ENST00000400814 FAM198AQ9UFP1 575 aa13.27□□□□□ -0.29
PRAMEF1-202ENST00000400814 DISP3Q9P2K9 1392 aa13.27□□□□□ -0.29
PRAMEF1-202ENST00000400814 DLC1Q96QB1 1528 aa13.27□□□□□ -0.29
PRAMEF1-202ENST00000400814 ARHGEF28Q8N1W1 1705 aaKnown RBP13.26□□□□□ -0.29
PRAMEF1-202ENST00000400814 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
PRAMEF1-202ENST00000400814 EYA1Q99502 592 aa13.26□□□□□ -0.29
PRAMEF1-202ENST00000400814 STK26Q9P289 416 aa13.26□□□□□ -0.29
PRAMEF1-202ENST00000400814 ZNF330Q9Y3S2 320 aaPredicted RBP13.26□□□□□ -0.29
PRAMEF1-202ENST00000400814 SPTLC1O15269 473 aa13.25□□□□□ -0.29
PRAMEF1-202ENST00000400814 CDCA8Q53HL2 280 aa13.25□□□□□ -0.29
PRAMEF1-202ENST00000400814 ARSIQ5FYB1 569 aa13.25□□□□□ -0.29
PRAMEF1-202ENST00000400814 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
PRAMEF1-202ENST00000400814 TECPR2O15040 1411 aa13.24□□□□□ -0.29
PRAMEF1-202ENST00000400814 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
PRAMEF1-202ENST00000400814 SLC26A8Q96RN1 970 aa13.24□□□□□ -0.29
PRAMEF1-202ENST00000400814 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
PRAMEF1-202ENST00000400814 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
PRAMEF1-202ENST00000400814 PIK3R4Q99570 1358 aa13.22□□□□□ -0.29
PRAMEF1-202ENST00000400814 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
PRAMEF1-202ENST00000400814 NECTIN2Q92692 538 aa13.22□□□□□ -0.29
PRAMEF1-202ENST00000400814 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
PRAMEF1-202ENST00000400814 QRICH2Q9H0J4 1663 aa13.22□□□□□ -0.29
PRAMEF1-202ENST00000400814 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
PRAMEF1-202ENST00000400814 COL9A1P20849 921 aa13.21□□□□□ -0.29
PRAMEF1-202ENST00000400814 RSBN1LQ6PCB5 846 aaPredicted RBP13.21□□□□□ -0.29
PRAMEF1-202ENST00000400814 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
PRAMEF1-202ENST00000400814 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
PRAMEF1-202ENST00000400814 MTMR14Q8NCE2 650 aa13.21□□□□□ -0.29
PRAMEF1-202ENST00000400814 POGKQ9P215 609 aa13.21□□□□□ -0.29
PRAMEF1-202ENST00000400814 NPHP4O75161 1426 aaPredicted RBP13.2□□□□□ -0.3
PRAMEF1-202ENST00000400814 CPS1P31327 1500 aa13.19□□□□□ -0.3
PRAMEF1-202ENST00000400814 HOXB3P14651 431 aaPredicted RBP13.19□□□□□ -0.3
PRAMEF1-202ENST00000400814 GPR153Q6NV75 609 aa13.19□□□□□ -0.3
PRAMEF1-202ENST00000400814 WAPLQ7Z5K2 1190 aa13.19□□□□□ -0.3
PRAMEF1-202ENST00000400814 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
PRAMEF1-202ENST00000400814 GDPD2Q9HCC8 539 aa13.19□□□□□ -0.3
PRAMEF1-202ENST00000400814 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
PRAMEF1-202ENST00000400814 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
PRAMEF1-202ENST00000400814 EVC2Q86UK5 1308 aa13.19□□□□□ -0.3
PRAMEF1-202ENST00000400814 MOXD2PA6NHM9 499 aa13.18□□□□□ -0.3
PRAMEF1-202ENST00000400814 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
PRAMEF1-202ENST00000400814 TRAIPQ9BWF2 469 aa13.18□□□□□ -0.3
PRAMEF1-202ENST00000400814 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
PRAMEF1-202ENST00000400814 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
PRAMEF1-202ENST00000400814 DNAJB2P25686 324 aa13.17□□□□□ -0.3
PRAMEF1-202ENST00000400814 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
PRAMEF1-202ENST00000400814 NUDT18Q6ZVK8 323 aa13.17□□□□□ -0.3
PRAMEF1-202ENST00000400814 ROBO2Q9HCK4 1378 aa13.17□□□□□ -0.3
PRAMEF1-202ENST00000400814 LMTK3Q96Q04 1460 aa13.17□□□□□ -0.3
PRAMEF1-202ENST00000400814 SOCS7O14512 581 aa13.16□□□□□ -0.3
PRAMEF1-202ENST00000400814 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
PRAMEF1-202ENST00000400814 PER1O15534 1290 aaPredicted RBP13.16□□□□□ -0.3
PRAMEF1-202ENST00000400814 GJA5P36382 358 aa13.16□□□□□ -0.3
PRAMEF1-202ENST00000400814 SAFB2Q14151 953 aaKnown RBP eCLIP13.16□□□□□ -0.3
PRAMEF1-202ENST00000400814 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
PRAMEF1-202ENST00000400814 LHX6Q9UPM6 363 aa13.16□□□□□ -0.3
PRAMEF1-202ENST00000400814 TULP4Q9NRJ4 1543 aa13.16□□□□□ -0.3
PRAMEF1-202ENST00000400814 CHD2O14647 1828 aaKnown RBP13.16□□□□□ -0.3
PRAMEF1-202ENST00000400814 C3orf80F5H4A9 247 aa13.15□□□□□ -0.3
PRAMEF1-202ENST00000400814 LILRB3O75022 631 aa13.15□□□□□ -0.3
PRAMEF1-202ENST00000400814 QPCTQ16769 361 aa13.15□□□□□ -0.3
PRAMEF1-202ENST00000400814 PPP4R3BQ5MIZ7 849 aa13.15□□□□□ -0.3
PRAMEF1-202ENST00000400814 WWC1Q8IX03 1113 aa13.15□□□□□ -0.3
PRAMEF1-202ENST00000400814 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
PRAMEF1-202ENST00000400814 PTCH1Q13635 1447 aa13.15□□□□□ -0.3
PRAMEF1-202ENST00000400814 ANP32CO43423 234 aa13.14□□□□□ -0.31
PRAMEF1-202ENST00000400814 NDUFV2P19404 249 aa13.14□□□□□ -0.31
PRAMEF1-202ENST00000400814 HSPA2P54652 639 aa13.14□□□□□ -0.31
PRAMEF1-202ENST00000400814 PANK3Q9H999 370 aa13.14□□□□□ -0.31
PRAMEF1-202ENST00000400814 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 KCNA6P17658 529 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 TATDN2Q93075 761 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 CDK19Q9BWU1 502 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 PRM3Q9NNZ6 103 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 PNMA3Q9UL41 463 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 MYOM1P52179 1685 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 NBPF26B4DH59 902 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 WASLO00401 505 aaPredicted RBP13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 AP1G2O75843 785 aa13.13□□□□□ -0.31
PRAMEF1-202ENST00000400814 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms