RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
CSNK2A1-204ENST00000400227 AXIN1O15169 862 aa10.2□□□□□ -0.78
CSNK2A1-204ENST00000400227 CALR3Q96L12 384 aaKnown RBP10.2□□□□□ -0.78
CSNK2A1-204ENST00000400227 AAASQ9NRG9 546 aa10.2□□□□□ -0.78
CSNK2A1-204ENST00000400227 RAPGEF2Q9Y4G8 1499 aa10.2□□□□□ -0.78
CSNK2A1-204ENST00000400227 CLIP1P30622 1438 aa10.19□□□□□ -0.78
CSNK2A1-204ENST00000400227 PIK3CDO00329 1044 aa10.19□□□□□ -0.78
CSNK2A1-204ENST00000400227 LCE2BO14633 110 aa10.19□□□□□ -0.78
CSNK2A1-204ENST00000400227 ZNF784Q8NCA9 323 aaPredicted RBP10.19□□□□□ -0.78
CSNK2A1-204ENST00000400227 TRIM52Q96A61 297 aa10.19□□□□□ -0.78
CSNK2A1-204ENST00000400227 PCDHB11Q9Y5F2 797 aa10.19□□□□□ -0.78
CSNK2A1-204ENST00000400227 CUX1P39880 1505 aa10.18□□□□□ -0.78
CSNK2A1-204ENST00000400227 ST8SIA5O15466 376 aa10.18□□□□□ -0.78
CSNK2A1-204ENST00000400227 TRAF7Q6Q0C0 670 aa10.18□□□□□ -0.78
CSNK2A1-204ENST00000400227 NFATC2IPQ8NCF5 419 aa10.18□□□□□ -0.78
CSNK2A1-204ENST00000400227 CCER1Q8TC90 406 aaPredicted RBP10.18□□□□□ -0.78
CSNK2A1-204ENST00000400227 UCN2Q96RP3 112 aa10.18□□□□□ -0.78
CSNK2A1-204ENST00000400227 ERICH3Q5RHP9 1530 aa10.18□□□□□ -0.78
CSNK2A1-204ENST00000400227 LILRA1O75019 489 aa10.17□□□□□ -0.78
CSNK2A1-204ENST00000400227 TSGA10IPQ3SY00 556 aa10.17□□□□□ -0.78
CSNK2A1-204ENST00000400227 DOLKQ9UPQ8 538 aa10.17□□□□□ -0.78
CSNK2A1-204ENST00000400227 VPS8Q8N3P4 1428 aa10.17□□□□□ -0.78
CSNK2A1-204ENST00000400227 ERVK-9P63128 1117 aa10.17□□□□□ -0.78
CSNK2A1-204ENST00000400227 MAP7D1Q3KQU3 841 aa10.17□□□□□ -0.78
CSNK2A1-204ENST00000400227 PLPP7Q8NBV4 271 aa10.17□□□□□ -0.78
CSNK2A1-204ENST00000400227 CFTRP13569 1480 aa10.16□□□□□ -0.78
CSNK2A1-204ENST00000400227 Q6ZVU0 165 aa10.16□□□□□ -0.78
CSNK2A1-204ENST00000400227 CDCA7Q9BWT1 371 aaPredicted RBP10.16□□□□□ -0.78
CSNK2A1-204ENST00000400227 CYLDQ9NQC7 956 aa10.16□□□□□ -0.78
CSNK2A1-204ENST00000400227 PRXQ9BXM0 1461 aa10.15□□□□□ -0.78
CSNK2A1-204ENST00000400227 SKIP12755 728 aa10.15□□□□□ -0.78
CSNK2A1-204ENST00000400227 CBLBQ13191 982 aa10.15□□□□□ -0.78
CSNK2A1-204ENST00000400227 CC2D2BQ6DHV5 1058 aa10.15□□□□□ -0.78
CSNK2A1-204ENST00000400227 MEIOBQ8N635 442 aa10.15□□□□□ -0.78
CSNK2A1-204ENST00000400227 TTBK1Q5TCY1 1321 aaPredicted RBP10.15□□□□□ -0.78
CSNK2A1-204ENST00000400227 SCTRP47872 440 aa10.14□□□□□ -0.79
CSNK2A1-204ENST00000400227 TBC1D9Q6ZT07 1266 aa10.14□□□□□ -0.79
CSNK2A1-204ENST00000400227 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
CSNK2A1-204ENST00000400227 DACH1Q9UI36 760 aa10.13□□□□□ -0.79
CSNK2A1-204ENST00000400227 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
CSNK2A1-204ENST00000400227 ATP9BO43861 1147 aa10.12□□□□□ -0.79
CSNK2A1-204ENST00000400227 USP17L5A8MUK1 530 aa10.11□□□□□ -0.79
CSNK2A1-204ENST00000400227 LZTS3O60299 673 aaPredicted RBP10.11□□□□□ -0.79
CSNK2A1-204ENST00000400227 USP4Q13107 963 aa10.11□□□□□ -0.79
CSNK2A1-204ENST00000400227 OXLD1Q5BKU9 147 aa10.11□□□□□ -0.79
CSNK2A1-204ENST00000400227 PPP1R12CQ9BZL4 782 aa10.11□□□□□ -0.79
CSNK2A1-204ENST00000400227 ATP13A2Q9NQ11 1180 aa10.11□□□□□ -0.79
CSNK2A1-204ENST00000400227 MYCP01106 439 aaPredicted RBP10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 ADH1AP07327 375 aa10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 BMP1P13497 986 aa10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 MRPL14Q6P1L8 145 aaKnown RBP10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 TRIM46Q7Z4K8 759 aa10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 SIRT1Q96EB6 747 aa10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 TFIP11Q9UBB9 837 aaKnown RBP10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 PALM3A6NDB9 673 aaPredicted RBP10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 PLEKHM2Q8IWE5 1019 aa10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 LINC00528Q8N1L1 170 aa10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 OSBPL3Q9H4L5 887 aa10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 ESF1Q9H501 851 aaKnown RBP10.1□□□□□ -0.79
CSNK2A1-204ENST00000400227 NCOA4Q13772 614 aa10.09□□□□□ -0.79
CSNK2A1-204ENST00000400227 EML3Q32P44 896 aa10.09□□□□□ -0.79
CSNK2A1-204ENST00000400227 TSEN34Q9BSV6 310 aaKnown RBP10.09□□□□□ -0.79
CSNK2A1-204ENST00000400227 ARAP1Q96P48 1450 aa10.09□□□□□ -0.79
CSNK2A1-204ENST00000400227 KIF27Q86VH2 1401 aa10.09□□□□□ -0.79
CSNK2A1-204ENST00000400227 USP17L3A6NCW0 530 aa10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 USP17L4A6NCW7 530 aa10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 UPP2O95045 317 aa10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 USP17L2Q6R6M4 530 aa10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 USP17L1Q7RTZ2 530 aa10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 DEPDC4Q8N2C3 294 aa10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 KDF1Q8NAX2 398 aaPredicted RBP10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 AGBL1Q96MI9 1066 aa10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 MAFBQ9Y5Q3 323 aaPredicted RBP10.08□□□□□ -0.8
CSNK2A1-204ENST00000400227 SCARF1Q14162 830 aa10.07□□□□□ -0.8
CSNK2A1-204ENST00000400227 ATP5J2-PTCD1G3V325 749 aa10.06□□□□□ -0.8
CSNK2A1-204ENST00000400227 RELBQ01201 579 aa10.06□□□□□ -0.8
CSNK2A1-204ENST00000400227 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
CSNK2A1-204ENST00000400227 PTGIRP43119 386 aa10.05□□□□□ -0.8
CSNK2A1-204ENST00000400227 SERPINA10Q9UK55 444 aa10.05□□□□□ -0.8
CSNK2A1-204ENST00000400227 NOD1Q9Y239 953 aa10.05□□□□□ -0.8
CSNK2A1-204ENST00000400227 BMP2P12643 396 aa10.04□□□□□ -0.8
CSNK2A1-204ENST00000400227 CFAP70Q5T0N1 1121 aa10.04□□□□□ -0.8
CSNK2A1-204ENST00000400227 C6orf118Q5T5N4 469 aa10.04□□□□□ -0.8
CSNK2A1-204ENST00000400227 CCDC97Q96F63 343 aaPredicted RBP10.04□□□□□ -0.8
CSNK2A1-204ENST00000400227 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
CSNK2A1-204ENST00000400227 SPINT1O43278 529 aa10.04□□□□□ -0.8
CSNK2A1-204ENST00000400227 LMOD1P29536 600 aaPredicted RBP10.04□□□□□ -0.8
CSNK2A1-204ENST00000400227 SENP2Q9HC62 589 aa10.04□□□□□ -0.8
CSNK2A1-204ENST00000400227 GMPR2Q9P2T1 348 aaKnown RBP10.04□□□□□ -0.8
CSNK2A1-204ENST00000400227 CADPSQ9ULU8 1353 aa10.03□□□□□ -0.8
CSNK2A1-204ENST00000400227 GNRH1P01148 92 aa10.03□□□□□ -0.8
CSNK2A1-204ENST00000400227 CCDC82Q8N4S0 544 aa10.03□□□□□ -0.8
CSNK2A1-204ENST00000400227 ZNF395Q9H8N7 513 aaPredicted RBP10.03□□□□□ -0.8
CSNK2A1-204ENST00000400227 MKRN1Q9UHC7 482 aaKnown RBP10.02□□□□□ -0.81
CSNK2A1-204ENST00000400227 PCDHGA11Q9Y5H2 935 aa10.02□□□□□ -0.81
CSNK2A1-204ENST00000400227 CC2D2AQ9P2K1 1620 aa10.02□□□□□ -0.81
CSNK2A1-204ENST00000400227 A0A1W2PRU2 124 aa10.01□□□□□ -0.81
CSNK2A1-204ENST00000400227 GTF2IP78347 998 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms