RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 LARP1Q6PKG0 1096 aaKnown RBP9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 ALS2CR12Q96Q35 445 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 CSB-PGBD3P0DP91 1061 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 SPECC1Q5M775 1068 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 CEP128Q6ZU80 1094 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 LMNTD2Q8IXW0 634 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 BICDL2A1A5D9 508 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 SYF2O95926 243 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 HVCN1Q96D96 273 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 DAAM1Q9Y4D1 1078 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 FGFR1OPO95684 399 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 CTNNA2P26232 953 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 SNX16P57768 344 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 DBN1Q16643 649 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 NDC80O14777 642 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 ARID4AP29374 1257 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 PSPC1Q8WXF1 523 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 ZBTB16Q05516 673 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 HAUS8Q9BT25 410 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 SH3BP5O60239 455 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 FBXW7Q969H0 707 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 DRC1Q96MC2 740 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 TANGO6Q9C0B7 1094 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 CCDC155Q8N6L0 562 aa9.98□□□□□ -0.81
CACNA1C-220ENST00000399655 TRPC3Q13507 836 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 SPC25Q9HBM1 224 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 BRPF1P55201 1214 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 INTS3Q68E01 1043 aaKnown RBP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 SSBP05455 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 INPP1P49441 399 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 EIF3DO15371 548 aaKnown RBP eCLIP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 A0A1W2PRG0 241 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 ERCC5P28715 1186 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 PAFAH1B1P43034 410 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 APBB1IPQ7Z5R6 666 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 ARHGAP25P42331 645 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 SLC4A8Q2Y0W8 1093 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 FOXD4L6Q3SYB3 417 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 FOXD4L3Q6VB84 417 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 ZNF710Q8N1W2 664 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 C16orf45Q96MC5 204 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 SEC62Q99442 399 aaKnown RBP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 NOC2LQ9Y3T9 749 aaKnown RBP9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 KIF18AQ8NI77 898 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 WHAMMP3Q1A5X7 153 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 CIB2O75838 187 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 PPP4R3AQ6IN85 833 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 TMEM87AQ8NBN3 555 aa9.97□□□□□ -0.81
CACNA1C-220ENST00000399655 PRC1O43663 620 aa9.96□□□□□ -0.81
CACNA1C-220ENST00000399655 IKQ13123 557 aaPredicted RBP9.96□□□□□ -0.81
CACNA1C-220ENST00000399655 FKBP15Q5T1M5 1219 aa9.96□□□□□ -0.81
CACNA1C-220ENST00000399655 P3H3Q8IVL6 736 aa9.96□□□□□ -0.81
CACNA1C-220ENST00000399655 SMTNL1A8MU46 457 aa9.96□□□□□ -0.82
CACNA1C-220ENST00000399655 TRIM63Q969Q1 353 aa9.96□□□□□ -0.82
CACNA1C-220ENST00000399655 FANCIQ9NVI1 1328 aa9.96□□□□□ -0.82
CACNA1C-220ENST00000399655 CKAP4Q07065 602 aaKnown RBP9.96□□□□□ -0.82
CACNA1C-220ENST00000399655 EHBP1Q8NDI1 1231 aa9.96□□□□□ -0.82
CACNA1C-220ENST00000399655 TUBB4BP68371 445 aa9.96□□□□□ -0.82
CACNA1C-220ENST00000399655 TSNAXIP1Q2TAA8 658 aa9.96□□□□□ -0.82
CACNA1C-220ENST00000399655 NOP2P46087 812 aaKnown RBP9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 LACTBP83111 547 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 PALM3A6NDB9 673 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 MATR3P43243 847 aaKnown RBP eCLIP9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 IFIT2P09913 472 aaKnown RBP9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 RUFY3Q7L099 469 aa9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 CHIC2Q9UKJ5 165 aa9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 AAMPQ13685 434 aa9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 IFT74Q96LB3 600 aa9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 HIP1O00291 1037 aa9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 ATP11AP98196 1134 aa9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 PRKRIP1Q9H875 184 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 PAWRQ96IZ0 340 aaKnown RBP9.95□□□□□ -0.82
CACNA1C-220ENST00000399655 GBP1P32455 592 aa9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 CETN1Q12798 172 aa9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 DDX27Q96GQ7 796 aaKnown RBP9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 ZFYVE1Q9HBF4 777 aa9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 SMARCC2Q8TAQ2 1214 aa9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 ZSCAN31Q96LW9 406 aaPredicted RBP9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 SLC4A10Q6U841 1118 aa9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 PDE1CQ14123 709 aaPredicted RBP9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 SERPINA10Q9UK55 444 aa9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 CCDC144CPQ8IYA2 1237 aa9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 HYPKQ9NX55 129 aa9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 CCDC38Q502W7 563 aa9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 TAOK1Q7L7X3 1001 aa9.94□□□□□ -0.82
CACNA1C-220ENST00000399655 SPDYE4A6NLX3 237 aa9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 ATP2A1O14983 1001 aa9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 JAKMIP2Q96AA8 810 aa9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 ARL1P40616 181 aaPredicted RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 TNIP1Q15025 636 aa9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 TRIM22Q8IYM9 498 aa9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 DACT3Q96B18 629 aaPredicted RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 IFI16Q16666 785 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 APLFQ8IW19 511 aaPredicted RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 RASAL2Q9UJF2 1139 aa9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 SF3B2Q13435 895 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 BCAP29Q9UHQ4 241 aa9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 CCDC77Q9BR77 488 aa9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 HIRIP3Q9BW71 556 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 323.6 ms