RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 ANXA1P04083 346 aa16.43■□□□□ 0.22
CACNA1C-211ENST00000399617 VAT1LQ9HCJ6 419 aa16.43■□□□□ 0.22
CACNA1C-211ENST00000399617 DUSP27Q5VZP5 1158 aa16.43■□□□□ 0.22
CACNA1C-211ENST00000399617 STK38Q15208 465 aa16.43■□□□□ 0.22
CACNA1C-211ENST00000399617 MAGEC2Q9UBF1 373 aaPredicted RBP16.43■□□□□ 0.22
CACNA1C-211ENST00000399617 EXOC6BQ9Y2D4 811 aa16.43■□□□□ 0.22
CACNA1C-211ENST00000399617 CCDC8Q9H0W5 538 aaPredicted RBP16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 FIBPO43427 364 aa16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 PPFIA3O75145 1194 aa16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 ATP6V1AP38606 617 aa16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 TXLNAP40222 546 aa16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 BOLA2Q9H3K6 86 aa16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 TFCP2L1Q9NZI6 479 aa16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 FEZ1Q99689 392 aa16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 ZNF408Q9H9D4 720 aa16.42■□□□□ 0.22
CACNA1C-211ENST00000399617 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
CACNA1C-211ENST00000399617 RANBP6O60518 1105 aaKnown RBP16.41■□□□□ 0.22
CACNA1C-211ENST00000399617 NSD3Q9BZ95 1437 aa16.41■□□□□ 0.22
CACNA1C-211ENST00000399617 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
CACNA1C-211ENST00000399617 KIF21BO75037 1637 aa16.4■□□□□ 0.22
CACNA1C-211ENST00000399617 CCT4P50991 539 aaKnown RBP16.4■□□□□ 0.22
CACNA1C-211ENST00000399617 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
CACNA1C-211ENST00000399617 ANKRD24Q8TF21 1146 aa16.4■□□□□ 0.22
CACNA1C-211ENST00000399617 SNRKQ9NRH2 765 aa16.4■□□□□ 0.22
CACNA1C-211ENST00000399617 RIMBP2O15034 1052 aa16.4■□□□□ 0.22
CACNA1C-211ENST00000399617 TRIM22Q8IYM9 498 aa16.4■□□□□ 0.22
CACNA1C-211ENST00000399617 RAB11FIP4Q86YS3 637 aa16.39■□□□□ 0.21
CACNA1C-211ENST00000399617 JAG2Q9Y219 1238 aa16.39■□□□□ 0.21
CACNA1C-211ENST00000399617 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.39■□□□□ 0.21
CACNA1C-211ENST00000399617 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
CACNA1C-211ENST00000399617 IDI1Q13907 227 aa16.39■□□□□ 0.21
CACNA1C-211ENST00000399617 CCDC97Q96F63 343 aaPredicted RBP16.39■□□□□ 0.21
CACNA1C-211ENST00000399617 IFT57Q9NWB7 429 aa16.39■□□□□ 0.21
CACNA1C-211ENST00000399617 NAIPQ13075 1403 aa16.39■□□□□ 0.21
CACNA1C-211ENST00000399617 SSR1P43307 286 aaKnown RBP16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 CCDC144CPQ8IYA2 1237 aa16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 LARP6Q9BRS8 491 aaKnown RBP16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 NBPF6Q5VWK0 638 aa16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 NBPF5PQ86XG9 351 aaPredicted RBP16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 NBPF4Q96M43 638 aa16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 UBA5Q9GZZ9 404 aa16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 IFIT5Q13325 482 aaKnown RBP16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 NEBLO76041 1014 aa16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 IFIT1P09914 478 aaKnown RBP16.38■□□□□ 0.21
CACNA1C-211ENST00000399617 ST5P78524 1137 aa16.37■□□□□ 0.21
CACNA1C-211ENST00000399617 SLC39A6Q13433 755 aa16.37■□□□□ 0.21
CACNA1C-211ENST00000399617 LMTK3Q96Q04 1460 aa16.37■□□□□ 0.21
CACNA1C-211ENST00000399617 DDX46Q7L014 1031 aaKnown RBP16.37■□□□□ 0.21
CACNA1C-211ENST00000399617 JAKMIP1Q96N16 626 aaKnown RBP16.37■□□□□ 0.21
CACNA1C-211ENST00000399617 GJA3Q9Y6H8 435 aa16.37■□□□□ 0.21
CACNA1C-211ENST00000399617 C11orf95C9JLR9 678 aaPredicted RBP16.37■□□□□ 0.21
CACNA1C-211ENST00000399617 ADGRL1O94910 1474 aa16.37■□□□□ 0.21
CACNA1C-211ENST00000399617 PICALMQ13492 652 aa16.36■□□□□ 0.21
CACNA1C-211ENST00000399617 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
CACNA1C-211ENST00000399617 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
CACNA1C-211ENST00000399617 MSH6P52701 1360 aa16.36■□□□□ 0.21
CACNA1C-211ENST00000399617 DHX37Q8IY37 1157 aaKnown RBP16.36■□□□□ 0.21
CACNA1C-211ENST00000399617 ADGRF5Q8IZF2 1346 aa16.36■□□□□ 0.21
CACNA1C-211ENST00000399617 HIP1O00291 1037 aa16.36■□□□□ 0.21
CACNA1C-211ENST00000399617 ZNF444Q8N0Y2 327 aaPredicted RBP16.36■□□□□ 0.21
CACNA1C-211ENST00000399617 VEZTQ9HBM0 779 aa16.36■□□□□ 0.21
CACNA1C-211ENST00000399617 GUCY1B3Q02153 619 aa16.35■□□□□ 0.21
CACNA1C-211ENST00000399617 PODXL2Q9NZ53 605 aa16.35■□□□□ 0.21
CACNA1C-211ENST00000399617 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
CACNA1C-211ENST00000399617 A0A087WZG4 1122 aa16.35■□□□□ 0.21
CACNA1C-211ENST00000399617 FAM83GA6ND36 823 aa16.35■□□□□ 0.21
CACNA1C-211ENST00000399617 ME1P48163 572 aa16.35■□□□□ 0.21
CACNA1C-211ENST00000399617 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
CACNA1C-211ENST00000399617 ANKRD18BA2A2Z9 1011 aa16.34■□□□□ 0.21
CACNA1C-211ENST00000399617 CALRP27797 417 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-211ENST00000399617 PRPF40AO75400 957 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-211ENST00000399617 SPC24Q8NBT2 197 aa16.34■□□□□ 0.21
CACNA1C-211ENST00000399617 SEC63Q9UGP8 760 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-211ENST00000399617 DDX17Q92841 729 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-211ENST00000399617 BIN2Q9UBW5 565 aaPredicted RBP16.34■□□□□ 0.21
CACNA1C-211ENST00000399617 LRRC59Q96AG4 307 aaKnown RBP16.33■□□□□ 0.21
CACNA1C-211ENST00000399617 WASLO00401 505 aaPredicted RBP16.33■□□□□ 0.2
CACNA1C-211ENST00000399617 SLC5A1P13866 664 aa16.33■□□□□ 0.2
CACNA1C-211ENST00000399617 NFE2L2Q16236 605 aa16.33■□□□□ 0.2
CACNA1C-211ENST00000399617 POLD1P28340 1107 aa16.33■□□□□ 0.2
CACNA1C-211ENST00000399617 MAP3K2Q9Y2U5 619 aa16.33■□□□□ 0.2
CACNA1C-211ENST00000399617 PLS1Q14651 629 aa16.33■□□□□ 0.2
CACNA1C-211ENST00000399617 ANKRD62A6NC57 917 aa16.32■□□□□ 0.2
CACNA1C-211ENST00000399617 KINO60870 393 aaKnown RBP16.32■□□□□ 0.2
CACNA1C-211ENST00000399617 TROQ12816 1431 aaPredicted RBP16.32■□□□□ 0.2
CACNA1C-211ENST00000399617 TMPOP42166 694 aaKnown RBP16.31■□□□□ 0.2
CACNA1C-211ENST00000399617 CCDC24Q8N4L8 307 aa16.31■□□□□ 0.2
CACNA1C-211ENST00000399617 PRKG1Q13976 671 aa16.31■□□□□ 0.2
CACNA1C-211ENST00000399617 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
CACNA1C-211ENST00000399617 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
CACNA1C-211ENST00000399617 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
CACNA1C-211ENST00000399617 DDB1Q16531 1140 aa16.31■□□□□ 0.2
CACNA1C-211ENST00000399617 RUFY1Q96T51 708 aa16.31■□□□□ 0.2
CACNA1C-211ENST00000399617 PDRG1Q9NUG6 133 aa16.31■□□□□ 0.2
CACNA1C-211ENST00000399617 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
CACNA1C-211ENST00000399617 ACEP12821 1306 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms