RNA–Protein interactions for RNA: ENST00000398367.1

UBASH3A-203, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-203ENST00000398367 ALDH1L2Q3SY69 923 aa18.85■□□□□ 0.61
UBASH3A-203ENST00000398367 AMOTQ4VCS5 1084 aa18.85■□□□□ 0.61
UBASH3A-203ENST00000398367 C20orf194Q5TEA3 1177 aa18.85■□□□□ 0.61
UBASH3A-203ENST00000398367 PLEKHG2Q9H7P9 1386 aa18.85■□□□□ 0.61
UBASH3A-203ENST00000398367 LMO7Q8WWI1 1683 aa18.84■□□□□ 0.61
UBASH3A-203ENST00000398367 B4GALNT3Q6L9W6 998 aa18.84■□□□□ 0.61
UBASH3A-203ENST00000398367 HAP1P54257 671 aaPredicted RBP18.83■□□□□ 0.61
UBASH3A-203ENST00000398367 PLEKHO1Q53GL0 409 aaPredicted RBP18.83■□□□□ 0.61
UBASH3A-203ENST00000398367 COL18A1P39060 1754 aa18.83■□□□□ 0.61
UBASH3A-203ENST00000398367 SMC4Q9NTJ3 1288 aa18.83■□□□□ 0.6
UBASH3A-203ENST00000398367 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
UBASH3A-203ENST00000398367 MS4A1P11836 297 aa18.82■□□□□ 0.6
UBASH3A-203ENST00000398367 FRAT1Q92837 279 aaPredicted RBP18.82■□□□□ 0.6
UBASH3A-203ENST00000398367 FAM208AQ9UK61 1670 aaKnown RBP18.81■□□□□ 0.6
UBASH3A-203ENST00000398367 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
UBASH3A-203ENST00000398367 SSH1Q8WYL5 1049 aa18.81■□□□□ 0.6
UBASH3A-203ENST00000398367 BABAM1Q9NWV8 329 aa18.81■□□□□ 0.6
UBASH3A-203ENST00000398367 ROBO1Q9Y6N7 1651 aa18.81■□□□□ 0.6
UBASH3A-203ENST00000398367 KIF16BQ96L93 1317 aa18.81■□□□□ 0.6
UBASH3A-203ENST00000398367 BRPF1P55201 1214 aaPredicted RBP18.8■□□□□ 0.6
UBASH3A-203ENST00000398367 BCL2L13Q9BXK5 485 aa18.8■□□□□ 0.6
UBASH3A-203ENST00000398367 PRDM11Q9NQV5 511 aa18.8■□□□□ 0.6
UBASH3A-203ENST00000398367 VAMP4O75379 141 aa18.8■□□□□ 0.6
UBASH3A-203ENST00000398367 CSB-PGBD3P0DP91 1061 aa18.8■□□□□ 0.6
UBASH3A-203ENST00000398367 CHRNA2Q15822 529 aa18.8■□□□□ 0.6
UBASH3A-203ENST00000398367 TWISTNBQ3B726 338 aaPredicted RBP18.8■□□□□ 0.6
UBASH3A-203ENST00000398367 ZKSCAN2Q63HK3 967 aa18.8■□□□□ 0.6
UBASH3A-203ENST00000398367 NLRP2Q9NX02 1062 aa18.8■□□□□ 0.6
UBASH3A-203ENST00000398367 AKAP4Q5JQC9 854 aa18.79■□□□□ 0.6
UBASH3A-203ENST00000398367 ABCA3Q99758 1704 aa18.78■□□□□ 0.6
UBASH3A-203ENST00000398367 IPO8O15397 1037 aaKnown RBP18.77■□□□□ 0.6
UBASH3A-203ENST00000398367 AAMPQ13685 434 aa18.77■□□□□ 0.6
UBASH3A-203ENST00000398367 ZNF530Q6P9A1 599 aaPredicted RBP18.77■□□□□ 0.6
UBASH3A-203ENST00000398367 RAPGEF4Q8WZA2 1011 aa18.77■□□□□ 0.6
UBASH3A-203ENST00000398367 RGPD2P0DJD1 1756 aa18.77■□□□□ 0.6
UBASH3A-203ENST00000398367 CEMIPQ8WUJ3 1361 aa18.77■□□□□ 0.6
UBASH3A-203ENST00000398367 OVOS2A0A0G2JMS6 1433 aa18.77■□□□□ 0.6
UBASH3A-203ENST00000398367 TSPYL4Q9UJ04 414 aa18.77■□□□□ 0.59
UBASH3A-203ENST00000398367 C1orf141Q5JVX7 400 aa18.76■□□□□ 0.59
UBASH3A-203ENST00000398367 TSPYL6Q8N831 410 aa18.76■□□□□ 0.59
UBASH3A-203ENST00000398367 C8orf58Q8NAV2 365 aa18.76■□□□□ 0.59
UBASH3A-203ENST00000398367 IL17REQ8NFR9 667 aa18.76■□□□□ 0.59
UBASH3A-203ENST00000398367 RGPD5Q99666 1765 aa18.75■□□□□ 0.59
UBASH3A-203ENST00000398367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.75■□□□□ 0.59
UBASH3A-203ENST00000398367 TATP17735 454 aaPredicted RBP18.74■□□□□ 0.59
UBASH3A-203ENST00000398367 TAF7Q15545 349 aaPredicted RBP18.74■□□□□ 0.59
UBASH3A-203ENST00000398367 ATF7IPQ6VMQ6 1270 aa18.74■□□□□ 0.59
UBASH3A-203ENST00000398367 WDR17Q8IZU2 1322 aa18.74■□□□□ 0.59
UBASH3A-203ENST00000398367 TOM1O60784 492 aa18.74■□□□□ 0.59
UBASH3A-203ENST00000398367 FTSJ3Q8IY81 847 aaKnown RBP18.74■□□□□ 0.59
UBASH3A-203ENST00000398367 DZIP1LQ8IYY4 767 aaKnown RBP18.74■□□□□ 0.59
UBASH3A-203ENST00000398367 PANK1Q8TE04 598 aa18.74■□□□□ 0.59
UBASH3A-203ENST00000398367 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
UBASH3A-203ENST00000398367 COL5A2P05997 1499 aaPredicted RBP18.73■□□□□ 0.59
UBASH3A-203ENST00000398367 ARHGAP45Q92619 1136 aa18.73■□□□□ 0.59
UBASH3A-203ENST00000398367 NOB1Q9ULX3 412 aaKnown RBP18.73■□□□□ 0.59
UBASH3A-203ENST00000398367 COL22A1Q8NFW1 1626 aaPredicted RBP18.73■□□□□ 0.59
UBASH3A-203ENST00000398367 MRPL50Q8N5N7 158 aaKnown RBP18.72■□□□□ 0.59
UBASH3A-203ENST00000398367 SPG7Q9UQ90 795 aa18.72■□□□□ 0.59
UBASH3A-203ENST00000398367 ELL2O00472 640 aaPredicted RBP18.71■□□□□ 0.59
UBASH3A-203ENST00000398367 TRIM27P14373 513 aa18.71■□□□□ 0.59
UBASH3A-203ENST00000398367 COG6Q9Y2V7 657 aa18.71■□□□□ 0.59
UBASH3A-203ENST00000398367 MIS18AQ9NYP9 233 aa18.7■□□□□ 0.58
UBASH3A-203ENST00000398367 MEGF6O75095 1541 aa18.7■□□□□ 0.58
UBASH3A-203ENST00000398367 RLBP1P12271 317 aa18.69■□□□□ 0.58
UBASH3A-203ENST00000398367 TEFQ10587 303 aa18.69■□□□□ 0.58
UBASH3A-203ENST00000398367 MVPQ14764 893 aaKnown RBP18.69■□□□□ 0.58
UBASH3A-203ENST00000398367 RNMTO43148 476 aaKnown RBP18.69■□□□□ 0.58
UBASH3A-203ENST00000398367 TOM1L2Q6ZVM7 507 aa18.69■□□□□ 0.58
UBASH3A-203ENST00000398367 CLUAP1Q96AJ1 413 aa18.68■□□□□ 0.58
UBASH3A-203ENST00000398367 CARD10Q9BWT7 1032 aa18.68■□□□□ 0.58
UBASH3A-203ENST00000398367 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
UBASH3A-203ENST00000398367 MPRIPQ6WCQ1 1025 aa18.67■□□□□ 0.58
UBASH3A-203ENST00000398367 TNNQ9UQP3 1299 aa18.67■□□□□ 0.58
UBASH3A-203ENST00000398367 EVA1CP58658 441 aa18.66■□□□□ 0.58
UBASH3A-203ENST00000398367 KRT24Q2M2I5 525 aa18.66■□□□□ 0.58
UBASH3A-203ENST00000398367 IFNL2Q8IZJ0 200 aa18.66■□□□□ 0.58
UBASH3A-203ENST00000398367 API5Q9BZZ5 524 aaKnown RBP18.66■□□□□ 0.58
UBASH3A-203ENST00000398367 DDX19BQ9UMR2 479 aa18.66■□□□□ 0.58
UBASH3A-203ENST00000398367 COL16A1Q07092 1604 aaPredicted RBP18.66■□□□□ 0.58
UBASH3A-203ENST00000398367 ADAMTS7Q9UKP4 1686 aa18.66■□□□□ 0.58
UBASH3A-203ENST00000398367 HSP90AB1P08238 724 aaKnown RBP18.66■□□□□ 0.58
UBASH3A-203ENST00000398367 CHMP4AQ9BY43 222 aa18.66■□□□□ 0.58
UBASH3A-203ENST00000398367 PHLPP1O60346 1717 aa18.65■□□□□ 0.58
UBASH3A-203ENST00000398367 PHKG2P15735 406 aa18.65■□□□□ 0.58
UBASH3A-203ENST00000398367 CENPQQ7L2Z9 268 aaPredicted RBP18.65■□□□□ 0.58
UBASH3A-203ENST00000398367 COL14A1Q05707 1796 aaKnown RBP18.65■□□□□ 0.58
UBASH3A-203ENST00000398367 HOXB7P09629 217 aa18.64■□□□□ 0.57
UBASH3A-203ENST00000398367 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
UBASH3A-203ENST00000398367 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
UBASH3A-203ENST00000398367 PKD1L3Q7Z443 1732 aa18.64■□□□□ 0.57
UBASH3A-203ENST00000398367 PARP4Q9UKK3 1724 aaKnown RBP18.63■□□□□ 0.57
UBASH3A-203ENST00000398367 KDM2BQ8NHM5 1336 aa18.63■□□□□ 0.57
UBASH3A-203ENST00000398367 BTBD11A6QL63 1104 aa18.63■□□□□ 0.57
UBASH3A-203ENST00000398367 ITPRIPQ8IWB1 547 aa18.63■□□□□ 0.57
UBASH3A-203ENST00000398367 PTPRCP08575 1304 aa18.63■□□□□ 0.57
UBASH3A-203ENST00000398367 STRN4Q9NRL3 753 aa18.63■□□□□ 0.57
UBASH3A-203ENST00000398367 ABCC4O15439 1325 aa18.62■□□□□ 0.57
UBASH3A-203ENST00000398367 UBAP1LF5GYI3 381 aa18.62■□□□□ 0.57
UBASH3A-203ENST00000398367 IL2RBP14784 551 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms