RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 POGKQ9P215 609 aa4.99□□□□□ -1.61
FNDC3A-202ENST00000398316 SOCS7O14512 581 aa4.99□□□□□ -1.61
FNDC3A-202ENST00000398316 CABP2Q9NPB3 220 aa4.99□□□□□ -1.61
FNDC3A-202ENST00000398316 ANKRD31Q8N7Z5 1873 aa4.98□□□□□ -1.61
FNDC3A-202ENST00000398316 HMGB2P26583 209 aaKnown RBP4.98□□□□□ -1.61
FNDC3A-202ENST00000398316 ZNF609O15014 1411 aa4.98□□□□□ -1.61
FNDC3A-202ENST00000398316 ATF3P18847 181 aa4.98□□□□□ -1.61
FNDC3A-202ENST00000398316 HSPA2P54652 639 aa4.98□□□□□ -1.61
FNDC3A-202ENST00000398316 KRT28Q7Z3Y7 464 aa4.98□□□□□ -1.61
FNDC3A-202ENST00000398316 FOCADQ5VW36 1801 aa4.98□□□□□ -1.61
FNDC3A-202ENST00000398316 SPATA31A1Q5TZJ5 1347 aa4.98□□□□□ -1.61
FNDC3A-202ENST00000398316 ERBB4Q15303 1308 aa4.98□□□□□ -1.61
FNDC3A-202ENST00000398316 MINK1Q8N4C8 1332 aaPredicted RBP4.98□□□□□ -1.61
FNDC3A-202ENST00000398316 MYH14Q7Z406 1995 aaKnown RBP4.97□□□□□ -1.61
FNDC3A-202ENST00000398316 DICER1Q9UPY3 1922 aaKnown RBP4.97□□□□□ -1.61
FNDC3A-202ENST00000398316 PAPPA2Q9BXP8 1791 aa4.97□□□□□ -1.61
FNDC3A-202ENST00000398316 DCAF8L1A6NGE4 600 aa4.97□□□□□ -1.61
FNDC3A-202ENST00000398316 AAMPQ13685 434 aa4.97□□□□□ -1.61
FNDC3A-202ENST00000398316 ERICH6BQ5W0A0 696 aa4.96□□□□□ -1.61
FNDC3A-202ENST00000398316 GCP02774 474 aa4.96□□□□□ -1.62
FNDC3A-202ENST00000398316 KNSTRNQ9Y448 316 aa4.96□□□□□ -1.62
FNDC3A-202ENST00000398316 ECM29Q5VYK3 1845 aa4.96□□□□□ -1.62
FNDC3A-202ENST00000398316 ORAI2Q96SN7 254 aa4.96□□□□□ -1.62
FNDC3A-202ENST00000398316 HAP1P54257 671 aaPredicted RBP4.96□□□□□ -1.62
FNDC3A-202ENST00000398316 AMOTQ4VCS5 1084 aa4.96□□□□□ -1.62
FNDC3A-202ENST00000398316 COG3Q96JB2 828 aa4.95□□□□□ -1.62
FNDC3A-202ENST00000398316 CHGAP10645 457 aaKnown RBP4.95□□□□□ -1.62
FNDC3A-202ENST00000398316 EIF4A2Q14240 407 aaKnown RBP4.95□□□□□ -1.62
FNDC3A-202ENST00000398316 VSIG10Q8N0Z9 540 aa4.95□□□□□ -1.62
FNDC3A-202ENST00000398316 COL4A1P02462 1669 aa4.95□□□□□ -1.62
FNDC3A-202ENST00000398316 DDX60LQ5H9U9 1706 aaKnown RBP4.95□□□□□ -1.62
FNDC3A-202ENST00000398316 COL11A2P13942 1736 aaPredicted RBP4.94□□□□□ -1.62
FNDC3A-202ENST00000398316 RUNDC1Q96C34 613 aa4.94□□□□□ -1.62
FNDC3A-202ENST00000398316 UBAP1LF5GYI3 381 aa4.94□□□□□ -1.62
FNDC3A-202ENST00000398316 NME9Q86XW9 330 aa4.94□□□□□ -1.62
FNDC3A-202ENST00000398316 LRP10Q7Z4F1 713 aa4.94□□□□□ -1.62
FNDC3A-202ENST00000398316 TNRC6CQ9HCJ0 1690 aaKnown RBP4.93□□□□□ -1.62
FNDC3A-202ENST00000398316 ERVV-2B6SEH9 535 aa4.93□□□□□ -1.62
FNDC3A-202ENST00000398316 TRIM35Q9UPQ4 493 aa4.93□□□□□ -1.62
FNDC3A-202ENST00000398316 LAMA4Q16363 1823 aa4.93□□□□□ -1.62
FNDC3A-202ENST00000398316 SNED1Q8TER0 1413 aa4.93□□□□□ -1.62
FNDC3A-202ENST00000398316 SRPK2P78362 688 aaKnown RBP4.93□□□□□ -1.62
FNDC3A-202ENST00000398316 ILDR2Q71H61 639 aa4.93□□□□□ -1.62
FNDC3A-202ENST00000398316 IFT57Q9NWB7 429 aa4.93□□□□□ -1.62
FNDC3A-202ENST00000398316 ARHGAP45Q92619 1136 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 UTYO14607 1347 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 CHL1O00533 1208 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 AKAP4Q5JQC9 854 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 NFE2L2Q16236 605 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 TICAM2Q86XR7 235 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 UNC5CLQ8IV45 518 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 FER1L6Q2WGJ9 1857 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 PCDH11XQ9BZA7 1347 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 PCDH11YQ9BZA8 1340 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 ALDH1L2Q3SY69 923 aa4.92□□□□□ -1.62
FNDC3A-202ENST00000398316 RTL9Q8NET4 1388 aa4.91□□□□□ -1.62
FNDC3A-202ENST00000398316 LMOD3Q0VAK6 560 aa4.91□□□□□ -1.62
FNDC3A-202ENST00000398316 PODXL2Q9NZ53 605 aa4.91□□□□□ -1.62
FNDC3A-202ENST00000398316 DIEXFQ68CQ4 756 aaKnown RBP4.91□□□□□ -1.62
FNDC3A-202ENST00000398316 DIAPH1O60610 1272 aaKnown RBP4.91□□□□□ -1.62
FNDC3A-202ENST00000398316 MYH7P12883 1935 aa4.9□□□□□ -1.62
FNDC3A-202ENST00000398316 FAM83GA6ND36 823 aa4.9□□□□□ -1.62
FNDC3A-202ENST00000398316 ANP32CO43423 234 aa4.9□□□□□ -1.62
FNDC3A-202ENST00000398316 IGSF3O75054 1194 aa4.9□□□□□ -1.62
FNDC3A-202ENST00000398316 HSP90AB1P08238 724 aaKnown RBP4.9□□□□□ -1.62
FNDC3A-202ENST00000398316 SLFN5Q08AF3 891 aa4.9□□□□□ -1.62
FNDC3A-202ENST00000398316 CFAP53Q96M91 514 aa4.9□□□□□ -1.62
FNDC3A-202ENST00000398316 EYA1Q99502 592 aa4.9□□□□□ -1.62
FNDC3A-202ENST00000398316 AXIN2Q9Y2T1 843 aa4.9□□□□□ -1.62
FNDC3A-202ENST00000398316 CALD1Q05682 793 aaKnown RBP4.9□□□□□ -1.62
FNDC3A-202ENST00000398316 MORC1Q86VD1 984 aa4.9□□□□□ -1.63
FNDC3A-202ENST00000398316 GAS2L2Q8NHY3 880 aa4.9□□□□□ -1.63
FNDC3A-202ENST00000398316 MTHFSP49914 203 aa4.9□□□□□ -1.63
FNDC3A-202ENST00000398316 ESCO1Q5FWF5 840 aa4.9□□□□□ -1.63
FNDC3A-202ENST00000398316 CHMP4AQ9BY43 222 aa4.9□□□□□ -1.63
FNDC3A-202ENST00000398316 ADAMTSL1Q8N6G6 1762 aa4.9□□□□□ -1.63
FNDC3A-202ENST00000398316 NUTM2DQ5VT03 806 aaPredicted RBP4.9□□□□□ -1.63
FNDC3A-202ENST00000398316 STK26Q9P289 416 aa4.9□□□□□ -1.63
FNDC3A-202ENST00000398316 LOC285556D6RIA3 1793 aa4.89□□□□□ -1.63
FNDC3A-202ENST00000398316 TAF1P21675 1872 aa4.89□□□□□ -1.63
FNDC3A-202ENST00000398316 CNTNAP4Q9C0A0 1308 aa4.89□□□□□ -1.63
FNDC3A-202ENST00000398316 KIF16BQ96L93 1317 aa4.89□□□□□ -1.63
FNDC3A-202ENST00000398316 RC3H1Q5TC82 1133 aaKnown RBP4.89□□□□□ -1.63
FNDC3A-202ENST00000398316 PHKG2P15735 406 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 DUSP27Q5VZP5 1158 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 CCDC125Q86Z20 511 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 CFAP44Q96MT7 982 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 TIAM2Q8IVF5 1701 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 DCAF5Q96JK2 942 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 RGS17Q9UGC6 210 aaPredicted RBP4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 CDK5RAP2Q96SN8 1893 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 TMPOP42166 694 aaKnown RBP4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 A0A0G2JS52 829 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 ZNF772Q68DY9 489 aaPredicted RBP4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 MEX3CQ5U5Q3 659 aaKnown RBP4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 NBPF6Q5VWK0 638 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 NBPF4Q96M43 638 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 NUDCQ9Y266 331 aa4.88□□□□□ -1.63
FNDC3A-202ENST00000398316 MYH13Q9UKX3 1938 aa4.87□□□□□ -1.63
FNDC3A-202ENST00000398316 ABCC4O15439 1325 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms