RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 CENPJQ9HC77 1338 aaPredicted RBP5.29□□□□□ -1.56
UBE3A-202ENST00000397954 BRINP3Q76B58 766 aa5.29□□□□□ -1.56
UBE3A-202ENST00000397954 COL18A1P39060 1754 aa5.29□□□□□ -1.56
UBE3A-202ENST00000397954 DSG2Q14126 1118 aa5.29□□□□□ -1.56
UBE3A-202ENST00000397954 SLC26A8Q96RN1 970 aa5.29□□□□□ -1.56
UBE3A-202ENST00000397954 CPSF1Q10570 1443 aaKnown RBP5.29□□□□□ -1.56
UBE3A-202ENST00000397954 SSH2Q76I76 1423 aa5.29□□□□□ -1.56
UBE3A-202ENST00000397954 RTL1A6NKG5 1358 aa5.28□□□□□ -1.56
UBE3A-202ENST00000397954 ROCK2O75116 1388 aaKnown RBP5.28□□□□□ -1.56
UBE3A-202ENST00000397954 WASLO00401 505 aaPredicted RBP5.28□□□□□ -1.56
UBE3A-202ENST00000397954 MAP3K13O43283 966 aa5.28□□□□□ -1.56
UBE3A-202ENST00000397954 BLMP54132 1417 aaPredicted RBP5.28□□□□□ -1.56
UBE3A-202ENST00000397954 EDC4Q6P2E9 1401 aaKnown RBP5.28□□□□□ -1.56
UBE3A-202ENST00000397954 ZNF831Q5JPB2 1677 aa5.28□□□□□ -1.56
UBE3A-202ENST00000397954 GPHNQ9NQX3 736 aaPredicted RBP5.28□□□□□ -1.56
UBE3A-202ENST00000397954 LRP6O75581 1613 aa5.28□□□□□ -1.56
UBE3A-202ENST00000397954 USP19O94966 1318 aa5.27□□□□□ -1.57
UBE3A-202ENST00000397954 SPATA31A3Q5VYP0 1347 aa5.27□□□□□ -1.57
UBE3A-202ENST00000397954 LTN1O94822 1766 aa5.27□□□□□ -1.57
UBE3A-202ENST00000397954 CICQ96RK0 1608 aaPredicted RBP5.27□□□□□ -1.57
UBE3A-202ENST00000397954 USP6P35125 1406 aa5.27□□□□□ -1.57
UBE3A-202ENST00000397954 POM121CA8CG34 1229 aa5.27□□□□□ -1.57
UBE3A-202ENST00000397954 OSBPP22059 807 aa5.27□□□□□ -1.57
UBE3A-202ENST00000397954 PRIM1P49642 420 aaKnown RBP5.27□□□□□ -1.57
UBE3A-202ENST00000397954 HIC1Q14526 733 aa5.27□□□□□ -1.57
UBE3A-202ENST00000397954 REM2Q8IYK8 340 aaPredicted RBP5.27□□□□□ -1.57
UBE3A-202ENST00000397954 CDK11BP21127 795 aaKnown RBP5.26□□□□□ -1.57
UBE3A-202ENST00000397954 CCDC125Q86Z20 511 aa5.26□□□□□ -1.57
UBE3A-202ENST00000397954 DCAF11Q8TEB1 546 aa5.26□□□□□ -1.57
UBE3A-202ENST00000397954 PHOX2BQ99453 314 aa5.26□□□□□ -1.57
UBE3A-202ENST00000397954 GDPD2Q9HCC8 539 aa5.26□□□□□ -1.57
UBE3A-202ENST00000397954 GLI3P10071 1580 aa5.26□□□□□ -1.57
UBE3A-202ENST00000397954 SPDYE16A6NNV3 312 aaPredicted RBP5.26□□□□□ -1.57
UBE3A-202ENST00000397954 POGKQ9P215 609 aa5.26□□□□□ -1.57
UBE3A-202ENST00000397954 PARD3Q8TEW0 1356 aa5.26□□□□□ -1.57
UBE3A-202ENST00000397954 NFAT5O94916 1531 aa5.26□□□□□ -1.57
UBE3A-202ENST00000397954 NPC1L1Q9UHC9 1359 aa5.26□□□□□ -1.57
UBE3A-202ENST00000397954 CDCA7Q9BWT1 371 aaPredicted RBP5.26□□□□□ -1.57
UBE3A-202ENST00000397954 THRAP3Q9Y2W1 955 aaKnown RBP5.26□□□□□ -1.57
UBE3A-202ENST00000397954 DISP2A7MBM2 1401 aa5.25□□□□□ -1.57
UBE3A-202ENST00000397954 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.25□□□□□ -1.57
UBE3A-202ENST00000397954 HSPA1LP34931 641 aa5.25□□□□□ -1.57
UBE3A-202ENST00000397954 SKIV2LQ15477 1246 aaKnown RBP5.25□□□□□ -1.57
UBE3A-202ENST00000397954 PELP1Q8IZL8 1130 aaKnown RBP5.25□□□□□ -1.57
UBE3A-202ENST00000397954 NLRP7Q8WX94 980 aa5.25□□□□□ -1.57
UBE3A-202ENST00000397954 PPIP5K1Q6PFW1 1433 aa5.25□□□□□ -1.57
UBE3A-202ENST00000397954 RREB1Q92766 1687 aa5.25□□□□□ -1.57
UBE3A-202ENST00000397954 ANKRD36BQ8N2N9 1353 aa5.25□□□□□ -1.57
UBE3A-202ENST00000397954 KCNH5Q8NCM2 988 aa5.25□□□□□ -1.57
UBE3A-202ENST00000397954 DDX12PQ92771 950 aa5.25□□□□□ -1.57
UBE3A-202ENST00000397954 CALR3Q96L12 384 aaKnown RBP5.25□□□□□ -1.57
UBE3A-202ENST00000397954 SPDYE5A6NIY4 337 aa5.24□□□□□ -1.57
UBE3A-202ENST00000397954 UNCXA6NJT0 531 aa5.24□□□□□ -1.57
UBE3A-202ENST00000397954 HSP90B1P14625 803 aaKnown RBP5.24□□□□□ -1.57
UBE3A-202ENST00000397954 MDM2Q00987 491 aaPredicted RBP5.24□□□□□ -1.57
UBE3A-202ENST00000397954 GLMNQ92990 594 aa5.24□□□□□ -1.57
UBE3A-202ENST00000397954 NGLY1Q96IV0 654 aa5.24□□□□□ -1.57
UBE3A-202ENST00000397954 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.24□□□□□ -1.57
UBE3A-202ENST00000397954 SMG6Q86US8 1419 aaKnown RBP5.24□□□□□ -1.57
UBE3A-202ENST00000397954 PKD1L3Q7Z443 1732 aa5.24□□□□□ -1.57
UBE3A-202ENST00000397954 RFX1P22670 979 aa5.24□□□□□ -1.57
UBE3A-202ENST00000397954 CFAP70Q5T0N1 1121 aa5.24□□□□□ -1.57
UBE3A-202ENST00000397954 PRAM1Q96QH2 718 aa5.24□□□□□ -1.57
UBE3A-202ENST00000397954 BEGAINQ9BUH8 593 aa5.24□□□□□ -1.57
UBE3A-202ENST00000397954 AATKQ6ZMQ8 1374 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 PEAK1Q9H792 1746 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 LRP5O75197 1615 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 PITPNM1O00562 1244 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 FCHSD2O94868 740 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 AKT1S1Q96B36 256 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 TNS1Q9HBL0 1735 aaKnown RBP5.23□□□□□ -1.57
UBE3A-202ENST00000397954 CCDC7Q96M83 1385 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 OVOS2A0A0J9YW53 1432 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 OVOS2Q6IE36 1432 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 NHSQ6T4R5 1651 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 EIF5BO60841 1220 aaKnown RBP5.23□□□□□ -1.57
UBE3A-202ENST00000397954 L3MBTL2Q969R5 705 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 COL24A1Q17RW2 1714 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 NCAPD2Q15021 1401 aa5.23□□□□□ -1.57
UBE3A-202ENST00000397954 PTGDRQ13258 359 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 CCDC27Q2M243 656 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 TERF2IPQ9NYB0 399 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 TRPC5Q9UL62 973 aaPredicted RBP5.22□□□□□ -1.57
UBE3A-202ENST00000397954 IVNS1ABPQ9Y6Y0 642 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 PLEKHH1Q9ULM0 1364 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 SSTR3P32745 418 aaPredicted RBP5.22□□□□□ -1.57
UBE3A-202ENST00000397954 TMF1P82094 1093 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 MTMR14Q8NCE2 650 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 TMUB1Q9BVT8 246 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 FARP1Q9Y4F1 1045 aaPredicted RBP5.22□□□□□ -1.57
UBE3A-202ENST00000397954 LRRC37A3O60309 1634 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 WASHC2AQ641Q2 1341 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 KTN1Q86UP2 1357 aaKnown RBP5.22□□□□□ -1.57
UBE3A-202ENST00000397954 SBF2Q86WG5 1849 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 CD163L1Q9NR16 1453 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 RBM6P78332 1123 aaKnown RBP5.22□□□□□ -1.57
UBE3A-202ENST00000397954 VPS72Q15906 364 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 KIF12Q96FN5 646 aa5.22□□□□□ -1.57
UBE3A-202ENST00000397954 CGNL1Q0VF96 1302 aa5.21□□□□□ -1.57
UBE3A-202ENST00000397954 RFC5P40937 340 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms