RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 BABAM1Q9NWV8 329 aa24.73■■□□□ 1.55
TSPAN4-204ENST00000397404 CRB1P82279 1406 aa24.73■■□□□ 1.55
TSPAN4-204ENST00000397404 TOM1L2Q6ZVM7 507 aa24.72■■□□□ 1.55
TSPAN4-204ENST00000397404 SPG7Q9UQ90 795 aa24.72■■□□□ 1.55
TSPAN4-204ENST00000397404 NWD2Q9ULI1 1742 aa24.72■■□□□ 1.55
TSPAN4-204ENST00000397404 AKAP4Q5JQC9 854 aa24.71■■□□□ 1.55
TSPAN4-204ENST00000397404 USHBP1Q8N6Y0 703 aa24.71■■□□□ 1.55
TSPAN4-204ENST00000397404 CFAP44Q96MT7 982 aa24.71■■□□□ 1.55
TSPAN4-204ENST00000397404 NEFLP07196 543 aa24.7■■□□□ 1.55
TSPAN4-204ENST00000397404 ZNF428Q96B54 188 aa24.7■■□□□ 1.55
TSPAN4-204ENST00000397404 RCAN3Q9UKA8 241 aa24.7■■□□□ 1.55
TSPAN4-204ENST00000397404 PARP4Q9UKK3 1724 aaKnown RBP24.69■■□□□ 1.54
TSPAN4-204ENST00000397404 C1orf141Q5JVX7 400 aa24.69■■□□□ 1.54
TSPAN4-204ENST00000397404 BTG4Q9NY30 223 aa24.69■■□□□ 1.54
TSPAN4-204ENST00000397404 ZNF853P0CG23 659 aa24.68■■□□□ 1.54
TSPAN4-204ENST00000397404 RNF123Q5XPI4 1314 aa24.67■■□□□ 1.54
TSPAN4-204ENST00000397404 SPINK5Q9NQ38 1064 aaPredicted RBP24.67■■□□□ 1.54
TSPAN4-204ENST00000397404 PKD1L3Q7Z443 1732 aa24.66■■□□□ 1.54
TSPAN4-204ENST00000397404 HSP90AB1P08238 724 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-204ENST00000397404 PLCH1Q4KWH8 1693 aa24.65■■□□□ 1.54
TSPAN4-204ENST00000397404 FANCIQ9NVI1 1328 aa24.65■■□□□ 1.54
TSPAN4-204ENST00000397404 LRRC37A3O60309 1634 aa24.65■■□□□ 1.54
TSPAN4-204ENST00000397404 ERICH6BQ5W0A0 696 aa24.65■■□□□ 1.54
TSPAN4-204ENST00000397404 CDCA7Q9BWT1 371 aaPredicted RBP24.65■■□□□ 1.54
TSPAN4-204ENST00000397404 THRAP3Q9Y2W1 955 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-204ENST00000397404 ZNF530Q6P9A1 599 aaPredicted RBP24.64■■□□□ 1.54
TSPAN4-204ENST00000397404 CEMIPQ8WUJ3 1361 aa24.64■■□□□ 1.53
TSPAN4-204ENST00000397404 SLIT2O94813 1529 aa24.64■■□□□ 1.53
TSPAN4-204ENST00000397404 IL2RBP14784 551 aa24.64■■□□□ 1.53
TSPAN4-204ENST00000397404 SUPT16HQ9Y5B9 1047 aaKnown RBP24.64■■□□□ 1.53
TSPAN4-204ENST00000397404 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.63■■□□□ 1.53
TSPAN4-204ENST00000397404 SOS1Q07889 1333 aaPredicted RBP24.62■■□□□ 1.53
TSPAN4-204ENST00000397404 LARP1Q6PKG0 1096 aaKnown RBP24.62■■□□□ 1.53
TSPAN4-204ENST00000397404 IFNL2Q8IZJ0 200 aa24.62■■□□□ 1.53
TSPAN4-204ENST00000397404 STRN4Q9NRL3 753 aa24.62■■□□□ 1.53
TSPAN4-204ENST00000397404 MEGF6O75095 1541 aa24.62■■□□□ 1.53
TSPAN4-204ENST00000397404 CHL1O00533 1208 aa24.61■■□□□ 1.53
TSPAN4-204ENST00000397404 NRAPQ86VF7 1730 aa24.6■■□□□ 1.53
TSPAN4-204ENST00000397404 ADAMTS7Q9UKP4 1686 aa24.6■■□□□ 1.53
TSPAN4-204ENST00000397404 CHMP4AQ9BY43 222 aa24.6■■□□□ 1.53
TSPAN4-204ENST00000397404 PCDH11XQ9BZA7 1347 aa24.6■■□□□ 1.53
TSPAN4-204ENST00000397404 PCDH11YQ9BZA8 1340 aa24.6■■□□□ 1.53
TSPAN4-204ENST00000397404 ADAMTS2O95450 1211 aa24.59■■□□□ 1.53
TSPAN4-204ENST00000397404 MCM10Q7L590 875 aa24.59■■□□□ 1.53
TSPAN4-204ENST00000397404 NUTM2BA6NNL0 878 aaPredicted RBP24.58■■□□□ 1.52
TSPAN4-204ENST00000397404 NUTM2EB1AL46 878 aaPredicted RBP24.58■■□□□ 1.52
TSPAN4-204ENST00000397404 HSPA1LP34931 641 aa24.58■■□□□ 1.52
TSPAN4-204ENST00000397404 TAF7Q15545 349 aaPredicted RBP24.58■■□□□ 1.52
TSPAN4-204ENST00000397404 NUTM2AQ8IVF1 878 aaPredicted RBP24.58■■□□□ 1.52
TSPAN4-204ENST00000397404 FNBP4Q8N3X1 1017 aaPredicted RBP24.57■■□□□ 1.52
TSPAN4-204ENST00000397404 ZCRB1Q8TBF4 217 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-204ENST00000397404 PHKG2P15735 406 aa24.56■■□□□ 1.52
TSPAN4-204ENST00000397404 IL17REQ8NFR9 667 aa24.56■■□□□ 1.52
TSPAN4-204ENST00000397404 DCAF5Q96JK2 942 aa24.56■■□□□ 1.52
TSPAN4-204ENST00000397404 MBIPQ9NS73 344 aa24.56■■□□□ 1.52
TSPAN4-204ENST00000397404 TEFQ10587 303 aa24.55■■□□□ 1.52
TSPAN4-204ENST00000397404 DCTN1Q14203 1278 aa24.55■■□□□ 1.52
TSPAN4-204ENST00000397404 UNC5CLQ8IV45 518 aa24.55■■□□□ 1.52
TSPAN4-204ENST00000397404 THUMPD2Q9BTF0 503 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-204ENST00000397404 LAS1LQ9Y4W2 734 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-204ENST00000397404 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-204ENST00000397404 DISP2A7MBM2 1401 aa24.54■■□□□ 1.52
TSPAN4-204ENST00000397404 RNMTO43148 476 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-204ENST00000397404 RRP1P56182 461 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-204ENST00000397404 ALDH1L2Q3SY69 923 aa24.54■■□□□ 1.52
TSPAN4-204ENST00000397404 TSR2Q969E8 191 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-204ENST00000397404 GTF3C3Q9Y5Q9 886 aa24.54■■□□□ 1.52
TSPAN4-204ENST00000397404 EXOSC9Q06265 439 aaKnown RBP24.53■■□□□ 1.52
TSPAN4-204ENST00000397404 NGLY1Q96IV0 654 aa24.52■■□□□ 1.52
TSPAN4-204ENST00000397404 TSPYL4Q9UJ04 414 aa24.52■■□□□ 1.52
TSPAN4-204ENST00000397404 SPATA31A1Q5TZJ5 1347 aa24.52■■□□□ 1.52
TSPAN4-204ENST00000397404 NKX1-1Q15270 411 aaPredicted RBP24.51■■□□□ 1.51
TSPAN4-204ENST00000397404 BARGINQ6ZT62 677 aa24.51■■□□□ 1.51
TSPAN4-204ENST00000397404 RARSP54136 660 aaKnown RBP24.51■■□□□ 1.51
TSPAN4-204ENST00000397404 BRPF1P55201 1214 aaPredicted RBP24.51■■□□□ 1.51
TSPAN4-204ENST00000397404 SPATA31A5Q5VU36 1347 aa24.5■■□□□ 1.51
TSPAN4-204ENST00000397404 SPATA31A7Q8IWB4 1347 aa24.5■■□□□ 1.51
TSPAN4-204ENST00000397404 SCN11AQ9UI33 1791 aa24.5■■□□□ 1.51
TSPAN4-204ENST00000397404 WNK3Q9BYP7 1800 aa24.5■■□□□ 1.51
TSPAN4-204ENST00000397404 VPS72Q15906 364 aa24.5■■□□□ 1.51
TSPAN4-204ENST00000397404 MRC1P22897 1456 aa24.49■■□□□ 1.51
TSPAN4-204ENST00000397404 MS4A1P11836 297 aa24.48■■□□□ 1.51
TSPAN4-204ENST00000397404 CYP27B1O15528 508 aa24.47■■□□□ 1.51
TSPAN4-204ENST00000397404 HOXB7P09629 217 aa24.47■■□□□ 1.51
TSPAN4-204ENST00000397404 MPRIPQ6WCQ1 1025 aa24.47■■□□□ 1.51
TSPAN4-204ENST00000397404 C8orf37Q96NL8 207 aa24.47■■□□□ 1.51
TSPAN4-204ENST00000397404 BCL9LQ86UU0 1499 aa24.47■■□□□ 1.51
TSPAN4-204ENST00000397404 LRP6O75581 1613 aa24.47■■□□□ 1.51
TSPAN4-204ENST00000397404 VIRMAQ69YN4 1812 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-204ENST00000397404 KIF16BQ96L93 1317 aa24.46■■□□□ 1.51
TSPAN4-204ENST00000397404 ERVV-2B6SEH9 535 aa24.46■■□□□ 1.51
TSPAN4-204ENST00000397404 TWISTNBQ3B726 338 aaPredicted RBP24.46■■□□□ 1.51
TSPAN4-204ENST00000397404 MEX3CQ5U5Q3 659 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-204ENST00000397404 TNS2Q63HR2 1409 aa24.46■■□□□ 1.51
TSPAN4-204ENST00000397404 EXOC5O00471 708 aa24.45■■□□□ 1.51
TSPAN4-204ENST00000397404 SLC52A2Q9HAB3 445 aa24.45■■□□□ 1.51
TSPAN4-204ENST00000397404 LGR6Q9HBX8 967 aa24.45■■□□□ 1.51
TSPAN4-204ENST00000397404 SIPA1L3O60292 1781 aaPredicted RBP24.45■■□□□ 1.5
TSPAN4-204ENST00000397404 VAMP4O75379 141 aa24.45■■□□□ 1.5
TSPAN4-204ENST00000397404 KDM6AO15550 1401 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms