RNA–Protein interactions for RNA: ENST00000397349.6

SMIM7-202, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,122 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-202ENST00000397349 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
SMIM7-202ENST00000397349 NUDCQ9Y266 331 aa11.44□□□□□ -0.58
SMIM7-202ENST00000397349 CPDO75976 1380 aa11.43□□□□□ -0.58
SMIM7-202ENST00000397349 JCADQ9P266 1359 aa11.43□□□□□ -0.58
SMIM7-202ENST00000397349 HSPA1LP34931 641 aa11.43□□□□□ -0.58
SMIM7-202ENST00000397349 CHRNA2Q15822 529 aa11.43□□□□□ -0.58
SMIM7-202ENST00000397349 IP6K1Q92551 441 aa11.43□□□□□ -0.58
SMIM7-202ENST00000397349 LTV1Q96GA3 475 aaPredicted RBP11.43□□□□□ -0.58
SMIM7-202ENST00000397349 PARP4Q9UKK3 1724 aaKnown RBP11.43□□□□□ -0.58
SMIM7-202ENST00000397349 BLMP54132 1417 aaPredicted RBP11.43□□□□□ -0.58
SMIM7-202ENST00000397349 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
SMIM7-202ENST00000397349 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
SMIM7-202ENST00000397349 EIF4A2Q14240 407 aaKnown RBP11.42□□□□□ -0.58
SMIM7-202ENST00000397349 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
SMIM7-202ENST00000397349 PRDM11Q9NQV5 511 aa11.42□□□□□ -0.58
SMIM7-202ENST00000397349 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.42□□□□□ -0.58
SMIM7-202ENST00000397349 U2AF1L5P0DN76 240 aaPredicted RBP11.41□□□□□ -0.58
SMIM7-202ENST00000397349 IL13P35225 146 aa11.41□□□□□ -0.58
SMIM7-202ENST00000397349 U2AF1Q01081 240 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMIM7-202ENST00000397349 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
SMIM7-202ENST00000397349 ADAMTS8Q9UP79 889 aa11.41□□□□□ -0.58
SMIM7-202ENST00000397349 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
SMIM7-202ENST00000397349 KAT6BQ8WYB5 2073 aa11.4□□□□□ -0.58
SMIM7-202ENST00000397349 ADAMTS2O95450 1211 aa11.39□□□□□ -0.59
SMIM7-202ENST00000397349 CCDC146Q8IYE0 955 aa11.39□□□□□ -0.59
SMIM7-202ENST00000397349 ANKRD24Q8TF21 1146 aa11.39□□□□□ -0.59
SMIM7-202ENST00000397349 AXIN2Q9Y2T1 843 aa11.39□□□□□ -0.59
SMIM7-202ENST00000397349 PCDHB13Q9Y5F0 798 aa11.39□□□□□ -0.59
SMIM7-202ENST00000397349 LRP6O75581 1613 aa11.38□□□□□ -0.59
SMIM7-202ENST00000397349 COL5A2P05997 1499 aaPredicted RBP11.38□□□□□ -0.59
SMIM7-202ENST00000397349 PKD1L3Q7Z443 1732 aa11.38□□□□□ -0.59
SMIM7-202ENST00000397349 SHANK3Q9BYB0 1731 aa11.38□□□□□ -0.59
SMIM7-202ENST00000397349 HMOX1P09601 288 aa11.38□□□□□ -0.59
SMIM7-202ENST00000397349 PYGBP11216 843 aa11.38□□□□□ -0.59
SMIM7-202ENST00000397349 SPATA31A6Q5VVP1 1343 aa11.37□□□□□ -0.59
SMIM7-202ENST00000397349 SENP3-EIF4A1A0A087X0R7 540 aa11.37□□□□□ -0.59
SMIM7-202ENST00000397349 FAM83GA6ND36 823 aa11.37□□□□□ -0.59
SMIM7-202ENST00000397349 ATMINO43313 823 aaPredicted RBP11.37□□□□□ -0.59
SMIM7-202ENST00000397349 CSB-PGBD3P0DP91 1061 aa11.37□□□□□ -0.59
SMIM7-202ENST00000397349 HNRNPUQ00839 825 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMIM7-202ENST00000397349 EYA1Q99502 592 aa11.37□□□□□ -0.59
SMIM7-202ENST00000397349 IGSF1Q8N6C5 1336 aa11.36□□□□□ -0.59
SMIM7-202ENST00000397349 SULT6B1Q6IMI4 303 aa11.36□□□□□ -0.59
SMIM7-202ENST00000397349 USHBP1Q8N6Y0 703 aa11.36□□□□□ -0.59
SMIM7-202ENST00000397349 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
SMIM7-202ENST00000397349 ERBB3P21860 1342 aa11.35□□□□□ -0.59
SMIM7-202ENST00000397349 MAPK8IP3Q9UPT6 1336 aa11.35□□□□□ -0.59
SMIM7-202ENST00000397349 PRKAR2BP31323 418 aa11.35□□□□□ -0.59
SMIM7-202ENST00000397349 EVA1CP58658 441 aa11.35□□□□□ -0.59
SMIM7-202ENST00000397349 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
SMIM7-202ENST00000397349 AEBP1Q8IUX7 1158 aa11.35□□□□□ -0.59
SMIM7-202ENST00000397349 FBXO41Q8TF61 875 aa11.35□□□□□ -0.59
SMIM7-202ENST00000397349 RUNDC1Q96C34 613 aa11.35□□□□□ -0.59
SMIM7-202ENST00000397349 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
SMIM7-202ENST00000397349 PNNQ9H307 717 aaKnown RBP11.35□□□□□ -0.59
SMIM7-202ENST00000397349 STRN4Q9NRL3 753 aa11.35□□□□□ -0.59
SMIM7-202ENST00000397349 BTG4Q9NY30 223 aa11.35□□□□□ -0.59
SMIM7-202ENST00000397349 NEFMP07197 916 aa11.34□□□□□ -0.59
SMIM7-202ENST00000397349 ATN1P54259 1190 aaPredicted RBP11.34□□□□□ -0.59
SMIM7-202ENST00000397349 MEX3CQ5U5Q3 659 aaKnown RBP11.34□□□□□ -0.59
SMIM7-202ENST00000397349 NBPF6Q5VWK0 638 aa11.34□□□□□ -0.59
SMIM7-202ENST00000397349 NBPF4Q96M43 638 aa11.34□□□□□ -0.59
SMIM7-202ENST00000397349 NLRP2Q9NX02 1062 aa11.34□□□□□ -0.59
SMIM7-202ENST00000397349 NCAPD2Q15021 1401 aa11.34□□□□□ -0.59
SMIM7-202ENST00000397349 WDR17Q8IZU2 1322 aa11.34□□□□□ -0.59
SMIM7-202ENST00000397349 FCHSD2O94868 740 aa11.33□□□□□ -0.6
SMIM7-202ENST00000397349 CHRM1P11229 460 aaPredicted RBP11.33□□□□□ -0.6
SMIM7-202ENST00000397349 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
SMIM7-202ENST00000397349 SALL2Q9Y467 1007 aaPredicted RBP11.33□□□□□ -0.6
SMIM7-202ENST00000397349 SLIT2O94813 1529 aa11.33□□□□□ -0.6
SMIM7-202ENST00000397349 ITGB4P16144 1822 aa11.32□□□□□ -0.6
SMIM7-202ENST00000397349 KDRP35968 1356 aa11.32□□□□□ -0.6
SMIM7-202ENST00000397349 APAF1O14727 1248 aa11.32□□□□□ -0.6
SMIM7-202ENST00000397349 TOM1L2Q6ZVM7 507 aa11.32□□□□□ -0.6
SMIM7-202ENST00000397349 IFNL1Q8IU54 200 aa11.32□□□□□ -0.6
SMIM7-202ENST00000397349 C8orf37Q96NL8 207 aa11.32□□□□□ -0.6
SMIM7-202ENST00000397349 PLEKHF1Q96S99 279 aa11.32□□□□□ -0.6
SMIM7-202ENST00000397349 CRB1P82279 1406 aa11.32□□□□□ -0.6
SMIM7-202ENST00000397349 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
SMIM7-202ENST00000397349 BRWD3Q6RI45 1802 aa11.31□□□□□ -0.6
SMIM7-202ENST00000397349 LARP1Q6PKG0 1096 aaKnown RBP11.31□□□□□ -0.6
SMIM7-202ENST00000397349 NGLY1Q96IV0 654 aa11.31□□□□□ -0.6
SMIM7-202ENST00000397349 NEUROD2Q15784 382 aa11.3□□□□□ -0.6
SMIM7-202ENST00000397349 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
SMIM7-202ENST00000397349 TCP11L2Q8N4U5 519 aa11.3□□□□□ -0.6
SMIM7-202ENST00000397349 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
SMIM7-202ENST00000397349 RRP7AQ9Y3A4 280 aaKnown RBP11.3□□□□□ -0.6
SMIM7-202ENST00000397349 LRRC37A3O60309 1634 aa11.3□□□□□ -0.6
SMIM7-202ENST00000397349 MEGF6O75095 1541 aa11.3□□□□□ -0.6
SMIM7-202ENST00000397349 PHACTR3Q96KR7 559 aa11.29□□□□□ -0.6
SMIM7-202ENST00000397349 METRNQ9UJH8 293 aa11.29□□□□□ -0.6
SMIM7-202ENST00000397349 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
SMIM7-202ENST00000397349 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
SMIM7-202ENST00000397349 TMPOP42166 694 aaKnown RBP11.28□□□□□ -0.6
SMIM7-202ENST00000397349 NFE2L2Q16236 605 aa11.28□□□□□ -0.6
SMIM7-202ENST00000397349 RAPGEF4Q8WZA2 1011 aa11.28□□□□□ -0.6
SMIM7-202ENST00000397349 CARD10Q9BWT7 1032 aa11.28□□□□□ -0.6
SMIM7-202ENST00000397349 USP35Q9P2H5 1018 aa11.28□□□□□ -0.6
SMIM7-202ENST00000397349 CCDC9Q9Y3X0 531 aaKnown RBP11.28□□□□□ -0.6
SMIM7-202ENST00000397349 DOT1LQ8TEK3 1739 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms