RNA–Protein interactions for RNA: ENST00000397154.7

NGDN-201, Transcript of neuroguidin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NGDN, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-201ENST00000397154 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
NGDN-201ENST00000397154 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
NGDN-201ENST00000397154 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
NGDN-201ENST00000397154 NSD2O96028 1365 aa12.1□□□□□ -0.47
NGDN-201ENST00000397154 CHD4Q14839 1912 aa12.1□□□□□ -0.47
NGDN-201ENST00000397154 TESK2Q96S53 571 aa12.1□□□□□ -0.47
NGDN-201ENST00000397154 LY75O60449 1722 aa12.1□□□□□ -0.47
NGDN-201ENST00000397154 MEGF6O75095 1541 aa12.1□□□□□ -0.47
NGDN-201ENST00000397154 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
NGDN-201ENST00000397154 SHANK3Q9BYB0 1731 aa12.09□□□□□ -0.47
NGDN-201ENST00000397154 ST20-MTHFSA0A0A6YYL1 179 aa12.09□□□□□ -0.47
NGDN-201ENST00000397154 CCNL1Q9UK58 526 aaPredicted RBP12.09□□□□□ -0.47
NGDN-201ENST00000397154 USP47Q96K76 1375 aa12.08□□□□□ -0.48
NGDN-201ENST00000397154 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
NGDN-201ENST00000397154 RAPGEF4Q8WZA2 1011 aa12.07□□□□□ -0.48
NGDN-201ENST00000397154 C1QTNF8P60827 252 aa12.07□□□□□ -0.48
NGDN-201ENST00000397154 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
NGDN-201ENST00000397154 TATP17735 454 aaPredicted RBP12.06□□□□□ -0.48
NGDN-201ENST00000397154 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
NGDN-201ENST00000397154 KIF24Q5T7B8 1368 aa12.06□□□□□ -0.48
NGDN-201ENST00000397154 TMF1P82094 1093 aa12.06□□□□□ -0.48
NGDN-201ENST00000397154 PCDH11XQ9BZA7 1347 aa12.05□□□□□ -0.48
NGDN-201ENST00000397154 PCDH11YQ9BZA8 1340 aa12.05□□□□□ -0.48
NGDN-201ENST00000397154 INSRP06213 1382 aa12.05□□□□□ -0.48
NGDN-201ENST00000397154 MSH5O43196 834 aa12.05□□□□□ -0.48
NGDN-201ENST00000397154 GRIN3BO60391 1043 aa12.05□□□□□ -0.48
NGDN-201ENST00000397154 KCNQ4P56696 695 aa12.05□□□□□ -0.48
NGDN-201ENST00000397154 RGPD2P0DJD1 1756 aa12.05□□□□□ -0.48
NGDN-201ENST00000397154 RRS1Q15050 365 aaKnown RBP12.05□□□□□ -0.48
NGDN-201ENST00000397154 NBPF6Q5VWK0 638 aa12.05□□□□□ -0.48
NGDN-201ENST00000397154 FLAD1Q8NFF5 587 aa12.05□□□□□ -0.48
NGDN-201ENST00000397154 NBPF4Q96M43 638 aa12.05□□□□□ -0.48
NGDN-201ENST00000397154 FLT4P35916 1363 aa12.04□□□□□ -0.48
NGDN-201ENST00000397154 FYB1O15117 783 aa12.04□□□□□ -0.48
NGDN-201ENST00000397154 GIGYF1O75420 1035 aaPredicted RBP12.04□□□□□ -0.48
NGDN-201ENST00000397154 CDCA8Q53HL2 280 aa12.04□□□□□ -0.48
NGDN-201ENST00000397154 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
NGDN-201ENST00000397154 FBLN1P23142 703 aa12.03□□□□□ -0.48
NGDN-201ENST00000397154 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
NGDN-201ENST00000397154 GGNBP2Q9H3C7 697 aa12.03□□□□□ -0.48
NGDN-201ENST00000397154 C5P01031 1676 aa12.03□□□□□ -0.48
NGDN-201ENST00000397154 COL23A1Q86Y22 540 aaPredicted RBP12.03□□□□□ -0.48
NGDN-201ENST00000397154 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
NGDN-201ENST00000397154 KIF20BQ96Q89 1820 aa12.03□□□□□ -0.48
NGDN-201ENST00000397154 PALLDQ8WX93 1383 aa12.02□□□□□ -0.49
NGDN-201ENST00000397154 NSD3Q9BZ95 1437 aa12.02□□□□□ -0.49
NGDN-201ENST00000397154 SMARCC1Q92922 1105 aaPredicted RBP12.02□□□□□ -0.49
NGDN-201ENST00000397154 CD2APQ9Y5K6 639 aa12.01□□□□□ -0.49
NGDN-201ENST00000397154 HSP90AB2PQ58FF8 381 aa12□□□□□ -0.49
NGDN-201ENST00000397154 YBX3P16989 372 aaKnown RBP eCLIP11.99□□□□□ -0.49
NGDN-201ENST00000397154 MSL1Q68DK7 614 aa11.99□□□□□ -0.49
NGDN-201ENST00000397154 PKD1L3Q7Z443 1732 aa11.99□□□□□ -0.49
NGDN-201ENST00000397154 AK7Q96M32 723 aa11.99□□□□□ -0.49
NGDN-201ENST00000397154 NCAPD2Q15021 1401 aa11.99□□□□□ -0.49
NGDN-201ENST00000397154 C4BP0C0L5 1744 aa11.98□□□□□ -0.49
NGDN-201ENST00000397154 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
NGDN-201ENST00000397154 CYP27B1O15528 508 aa11.98□□□□□ -0.49
NGDN-201ENST00000397154 SPG7Q9UQ90 795 aa11.98□□□□□ -0.49
NGDN-201ENST00000397154 TOGARAM1Q9Y4F4 1720 aa11.97□□□□□ -0.49
NGDN-201ENST00000397154 TAF1LQ8IZX4 1826 aa11.97□□□□□ -0.49
NGDN-201ENST00000397154 ATP10DQ9P241 1426 aa11.96□□□□□ -0.49
NGDN-201ENST00000397154 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
NGDN-201ENST00000397154 ANKRD26Q9UPS8 1709 aa11.96□□□□□ -0.5
NGDN-201ENST00000397154 SSFA2P28290 1259 aa11.95□□□□□ -0.5
NGDN-201ENST00000397154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■□□□□ 10.6
NGDN-201ENST00000397154 EMILIN1Q9Y6C2 1016 aa11.95□□□□□ -0.5
NGDN-201ENST00000397154 PLEKHG2Q9H7P9 1386 aa11.95□□□□□ -0.5
NGDN-201ENST00000397154 ITGB4P16144 1822 aa11.94□□□□□ -0.5
NGDN-201ENST00000397154 PIGBQ92521 554 aa11.94□□□□□ -0.5
NGDN-201ENST00000397154 WASHC2AQ641Q2 1341 aa11.94□□□□□ -0.5
NGDN-201ENST00000397154 CARD14Q9BXL6 1004 aa11.94□□□□□ -0.5
NGDN-201ENST00000397154 TMOD3Q9NYL9 352 aa11.94□□□□□ -0.5
NGDN-201ENST00000397154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.93□□□□□ -0.5
NGDN-201ENST00000397154 ADCY9O60503 1353 aa11.93□□□□□ -0.5
NGDN-201ENST00000397154 UBR3Q6ZT12 1888 aa11.93□□□□□ -0.5
NGDN-201ENST00000397154 LOC102724428A0A0B4J2F2 783 aa11.92□□□□□ -0.5
NGDN-201ENST00000397154 PPM1GO15355 546 aaPredicted RBP11.92□□□□□ -0.5
NGDN-201ENST00000397154 PHF14O94880 888 aa11.92□□□□□ -0.5
NGDN-201ENST00000397154 SIK1P57059 783 aa11.92□□□□□ -0.5
NGDN-201ENST00000397154 GPBP1L1Q9HC44 474 aaPredicted RBP11.92□□□□□ -0.5
NGDN-201ENST00000397154 IGSF1Q8N6C5 1336 aa11.92□□□□□ -0.5
NGDN-201ENST00000397154 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
NGDN-201ENST00000397154 MAP2P11137 1827 aaKnown RBP11.91□□□□□ -0.5
NGDN-201ENST00000397154 LINC00116Q8NCU8 138 aa11.91□□□□□ -0.5
NGDN-201ENST00000397154 EYA1Q99502 592 aa11.91□□□□□ -0.5
NGDN-201ENST00000397154 PHKG2P15735 406 aa11.9□□□□□ -0.5
NGDN-201ENST00000397154 TIMELESSQ9UNS1 1208 aa11.9□□□□□ -0.5
NGDN-201ENST00000397154 GNPATO15228 680 aa11.9□□□□□ -0.51
NGDN-201ENST00000397154 AMIGO3Q86WK7 504 aa11.9□□□□□ -0.51
NGDN-201ENST00000397154 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
NGDN-201ENST00000397154 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
NGDN-201ENST00000397154 POLKQ9UBT6 870 aa11.88□□□□□ -0.51
NGDN-201ENST00000397154 ASAP1Q9ULH1 1129 aa11.88□□□□□ -0.51
NGDN-201ENST00000397154 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
NGDN-201ENST00000397154 ITPK1Q13572 414 aa11.88□□□□□ -0.51
NGDN-201ENST00000397154 KDRP35968 1356 aa11.88□□□□□ -0.51
NGDN-201ENST00000397154 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
NGDN-201ENST00000397154 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
NGDN-201ENST00000397154 ADRA2BP18089 450 aa11.87□□□□□ -0.51
NGDN-201ENST00000397154 EIF4A2Q14240 407 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms