RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.93■■□□□ 1.1
AP1S3-202ENST00000396653 EXOC5O00471 708 aa21.92■■□□□ 1.1
AP1S3-202ENST00000396653 HMOX1P09601 288 aa21.92■■□□□ 1.1
AP1S3-202ENST00000396653 U2AF1L5P0DN76 240 aaPredicted RBP21.92■■□□□ 1.1
AP1S3-202ENST00000396653 U2AF1Q01081 240 aaKnown RBP eCLIP21.92■■□□□ 1.1
AP1S3-202ENST00000396653 FCHSD2O94868 740 aa21.9■■□□□ 1.1
AP1S3-202ENST00000396653 PDE3BQ13370 1112 aa21.9■■□□□ 1.1
AP1S3-202ENST00000396653 KRT27Q7Z3Y8 459 aa21.9■■□□□ 1.1
AP1S3-202ENST00000396653 ZCRB1Q8TBF4 217 aaKnown RBP21.9■■□□□ 1.1
AP1S3-202ENST00000396653 RSPH6AQ9H0K4 717 aa21.9■■□□□ 1.1
AP1S3-202ENST00000396653 MRS2Q9HD23 443 aa21.9■■□□□ 1.1
AP1S3-202ENST00000396653 PCDH11XQ9BZA7 1347 aa21.89■■□□□ 1.1
AP1S3-202ENST00000396653 PCDH11YQ9BZA8 1340 aa21.89■■□□□ 1.1
AP1S3-202ENST00000396653 CCER2I3L3R5 266 aa21.89■■□□□ 1.09
AP1S3-202ENST00000396653 WDR43Q15061 677 aaKnown RBP eCLIP21.89■■□□□ 1.09
AP1S3-202ENST00000396653 AMOTQ4VCS5 1084 aa21.89■■□□□ 1.09
AP1S3-202ENST00000396653 CCDC184Q52MB2 194 aa21.89■■□□□ 1.09
AP1S3-202ENST00000396653 SPG7Q9UQ90 795 aa21.89■■□□□ 1.09
AP1S3-202ENST00000396653 BCL9O00512 1426 aa21.89■■□□□ 1.09
AP1S3-202ENST00000396653 SBF2Q86WG5 1849 aa21.87■■□□□ 1.09
AP1S3-202ENST00000396653 PLEKHO1Q53GL0 409 aaPredicted RBP21.87■■□□□ 1.09
AP1S3-202ENST00000396653 PNNQ9H307 717 aaKnown RBP21.87■■□□□ 1.09
AP1S3-202ENST00000396653 PRKAR2BP31323 418 aa21.86■■□□□ 1.09
AP1S3-202ENST00000396653 VIRMAQ69YN4 1812 aaKnown RBP21.85■■□□□ 1.09
AP1S3-202ENST00000396653 ILDR2Q71H61 639 aa21.84■■□□□ 1.09
AP1S3-202ENST00000396653 MARCH10Q8NA82 808 aaPredicted RBP21.84■■□□□ 1.09
AP1S3-202ENST00000396653 DOT1LQ8TEK3 1739 aa21.83■■□□□ 1.09
AP1S3-202ENST00000396653 PNISRQ8TF01 805 aaKnown RBP21.83■■□□□ 1.09
AP1S3-202ENST00000396653 NHSQ6T4R5 1651 aa21.82■■□□□ 1.08
AP1S3-202ENST00000396653 PLEKHF1Q96S99 279 aa21.82■■□□□ 1.08
AP1S3-202ENST00000396653 DLG5Q8TDM6 1919 aa21.82■■□□□ 1.08
AP1S3-202ENST00000396653 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
AP1S3-202ENST00000396653 SCN11AQ9UI33 1791 aa21.82■■□□□ 1.08
AP1S3-202ENST00000396653 TOGARAM1Q9Y4F4 1720 aa21.81■■□□□ 1.08
AP1S3-202ENST00000396653 CYP27B1O15528 508 aa21.81■■□□□ 1.08
AP1S3-202ENST00000396653 NEFMP07197 916 aa21.81■■□□□ 1.08
AP1S3-202ENST00000396653 FAM196AQ6ZSG2 479 aa21.81■■□□□ 1.08
AP1S3-202ENST00000396653 IFNL2Q8IZJ0 200 aa21.81■■□□□ 1.08
AP1S3-202ENST00000396653 MIER1Q8N108 512 aa21.81■■□□□ 1.08
AP1S3-202ENST00000396653 GAS2L2Q8NHY3 880 aa21.81■■□□□ 1.08
AP1S3-202ENST00000396653 DDX54Q8TDD1 881 aaKnown RBP21.81■■□□□ 1.08
AP1S3-202ENST00000396653 ADAMTS8Q9UP79 889 aa21.81■■□□□ 1.08
AP1S3-202ENST00000396653 PHKG2P15735 406 aa21.8■■□□□ 1.08
AP1S3-202ENST00000396653 ZNF530Q6P9A1 599 aaPredicted RBP21.8■■□□□ 1.08
AP1S3-202ENST00000396653 NKX1-1Q15270 411 aaPredicted RBP21.79■■□□□ 1.08
AP1S3-202ENST00000396653 MAPK8IP3Q9UPT6 1336 aa21.79■■□□□ 1.08
AP1S3-202ENST00000396653 ITGB4P16144 1822 aa21.78■■□□□ 1.08
AP1S3-202ENST00000396653 HSP90AB1P08238 724 aaKnown RBP21.78■■□□□ 1.08
AP1S3-202ENST00000396653 MTHFSDQ2M296 383 aaKnown RBP21.78■■□□□ 1.08
AP1S3-202ENST00000396653 C1orf141Q5JVX7 400 aa21.78■■□□□ 1.08
AP1S3-202ENST00000396653 PHACTR3Q96KR7 559 aa21.78■■□□□ 1.08
AP1S3-202ENST00000396653 TNS1Q9HBL0 1735 aaKnown RBP21.77■■□□□ 1.08
AP1S3-202ENST00000396653 AKAP4Q5JQC9 854 aa21.77■■□□□ 1.08
AP1S3-202ENST00000396653 RUNDC1Q96C34 613 aa21.77■■□□□ 1.08
AP1S3-202ENST00000396653 KAT6BQ8WYB5 2073 aa21.76■■□□□ 1.07
AP1S3-202ENST00000396653 MAP3K5Q99683 1374 aa21.75■■□□□ 1.07
AP1S3-202ENST00000396653 FAM182BQ5T319 152 aa21.75■■□□□ 1.07
AP1S3-202ENST00000396653 KDM6AO15550 1401 aaPredicted RBP21.74■■□□□ 1.07
AP1S3-202ENST00000396653 MRC1P22897 1456 aa21.73■■□□□ 1.07
AP1S3-202ENST00000396653 DCAF5Q96JK2 942 aa21.73■■□□□ 1.07
AP1S3-202ENST00000396653 BTAF1O14981 1849 aa21.73■■□□□ 1.07
AP1S3-202ENST00000396653 NFE2L2Q16236 605 aa21.72■■□□□ 1.07
AP1S3-202ENST00000396653 RGPD3A6NKT7 1758 aaPredicted RBP21.71■■□□□ 1.07
AP1S3-202ENST00000396653 SIPA1L3O60292 1781 aaPredicted RBP21.71■■□□□ 1.07
AP1S3-202ENST00000396653 RGPD4Q7Z3J3 1758 aa21.71■■□□□ 1.07
AP1S3-202ENST00000396653 GNAT3A8MTJ3 354 aa21.71■■□□□ 1.07
AP1S3-202ENST00000396653 CCDC146Q8IYE0 955 aa21.71■■□□□ 1.07
AP1S3-202ENST00000396653 HTATSF1O43719 755 aaKnown RBP21.7■■□□□ 1.06
AP1S3-202ENST00000396653 FAM9BQ8IZU0 186 aa21.69■■□□□ 1.06
AP1S3-202ENST00000396653 ERVV-2B6SEH9 535 aa21.68■■□□□ 1.06
AP1S3-202ENST00000396653 TMPOP42166 694 aaKnown RBP21.68■■□□□ 1.06
AP1S3-202ENST00000396653 CCDC125Q86Z20 511 aa21.68■■□□□ 1.06
AP1S3-202ENST00000396653 BCL11BQ9C0K0 894 aaPredicted RBP21.68■■□□□ 1.06
AP1S3-202ENST00000396653 CEMIPQ8WUJ3 1361 aa21.67■■□□□ 1.06
AP1S3-202ENST00000396653 RNMTO43148 476 aaKnown RBP21.67■■□□□ 1.06
AP1S3-202ENST00000396653 MPRIPQ6WCQ1 1025 aa21.67■■□□□ 1.06
AP1S3-202ENST00000396653 EP400Q96L91 3159 aa21.67■■□□□ 1.06
AP1S3-202ENST00000396653 TRIM37O94972 964 aa21.66■■□□□ 1.06
AP1S3-202ENST00000396653 ACSBG1Q96GR2 724 aa21.66■■□□□ 1.06
AP1S3-202ENST00000396653 PAPPAQ13219 1627 aa21.66■■□□□ 1.06
AP1S3-202ENST00000396653 LMOD3Q0VAK6 560 aa21.65■■□□□ 1.06
AP1S3-202ENST00000396653 RTF1Q92541 710 aaKnown RBP21.65■■□□□ 1.06
AP1S3-202ENST00000396653 PRIM1P49642 420 aaKnown RBP21.64■■□□□ 1.05
AP1S3-202ENST00000396653 NCBP3Q53F19 620 aaKnown RBP21.64■■□□□ 1.05
AP1S3-202ENST00000396653 UPF1Q92900 1129 aaKnown RBP eCLIP21.64■■□□□ 1.05
AP1S3-202ENST00000396653 LY75O60449 1722 aa21.63■■□□□ 1.05
AP1S3-202ENST00000396653 APAF1O14727 1248 aa21.63■■□□□ 1.05
AP1S3-202ENST00000396653 KCNQ2O43526 872 aa21.63■■□□□ 1.05
AP1S3-202ENST00000396653 RIPK4P57078 832 aa21.63■■□□□ 1.05
AP1S3-202ENST00000396653 IL17REQ8NFR9 667 aa21.63■■□□□ 1.05
AP1S3-202ENST00000396653 TMOD3Q9NYL9 352 aa21.63■■□□□ 1.05
AP1S3-202ENST00000396653 SF3B2Q13435 895 aaKnown RBP21.62■■□□□ 1.05
AP1S3-202ENST00000396653 SYTL4Q96C24 671 aaPredicted RBP21.62■■□□□ 1.05
AP1S3-202ENST00000396653 SLC52A2Q9HAB3 445 aa21.62■■□□□ 1.05
AP1S3-202ENST00000396653 LGR6Q9HBX8 967 aa21.62■■□□□ 1.05
AP1S3-202ENST00000396653 CABP4P57796 275 aa21.61■■□□□ 1.05
AP1S3-202ENST00000396653 NGEFQ8N5V2 710 aa21.6■■□□□ 1.05
AP1S3-202ENST00000396653 RRP7AQ9Y3A4 280 aaKnown RBP21.6■■□□□ 1.05
AP1S3-202ENST00000396653 RREB1Q92766 1687 aa21.6■■□□□ 1.05
AP1S3-202ENST00000396653 UBR2Q8IWV8 1755 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms