RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 BCL2L12Q9HB09 334 aa15.57■□□□□ 0.08
RTN1-203ENST00000395090 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.55■□□□□ 0.08
RTN1-203ENST00000395090 CCER2I3L3R5 266 aa15.55■□□□□ 0.08
RTN1-203ENST00000395090 CARD14Q9BXL6 1004 aa15.55■□□□□ 0.08
RTN1-203ENST00000395090 RBM27Q9P2N5 1060 aaKnown RBP15.55■□□□□ 0.08
RTN1-203ENST00000395090 ADGRB2O60241 1585 aa15.55■□□□□ 0.08
RTN1-203ENST00000395090 PADI6Q6TGC4 694 aa15.54■□□□□ 0.08
RTN1-203ENST00000395090 KTN1Q86UP2 1357 aaKnown RBP15.54■□□□□ 0.08
RTN1-203ENST00000395090 TMC1Q8TDI8 760 aa15.54■□□□□ 0.08
RTN1-203ENST00000395090 KNSTRNQ9Y448 316 aa15.54■□□□□ 0.08
RTN1-203ENST00000395090 STRCQ7RTU9 1775 aa15.53■□□□□ 0.08
RTN1-203ENST00000395090 NPC1L1Q9UHC9 1359 aa15.53■□□□□ 0.08
RTN1-203ENST00000395090 NWD1Q149M9 1564 aa15.52■□□□□ 0.08
RTN1-203ENST00000395090 PARP9Q8IXQ6 854 aa15.52■□□□□ 0.08
RTN1-203ENST00000395090 ANKRD36BQ8N2N9 1353 aa15.52■□□□□ 0.07
RTN1-203ENST00000395090 PTPREP23469 700 aa15.51■□□□□ 0.07
RTN1-203ENST00000395090 PRSS12P56730 875 aa15.51■□□□□ 0.07
RTN1-203ENST00000395090 TTLL12Q14166 644 aaPredicted RBP15.51■□□□□ 0.07
RTN1-203ENST00000395090 RALBP1Q15311 655 aa15.51■□□□□ 0.07
RTN1-203ENST00000395090 NUDT16Q96DE0 195 aaKnown RBP15.51■□□□□ 0.07
RTN1-203ENST00000395090 CABP1Q9NZU7 370 aa15.51■□□□□ 0.07
RTN1-203ENST00000395090 DAXXQ9UER7 740 aaPredicted RBP15.51■□□□□ 0.07
RTN1-203ENST00000395090 CDCA7LQ96GN5 454 aa15.5■□□□□ 0.07
RTN1-203ENST00000395090 TERF2IPQ9NYB0 399 aa15.5■□□□□ 0.07
RTN1-203ENST00000395090 PARD3Q8TEW0 1356 aa15.49■□□□□ 0.07
RTN1-203ENST00000395090 COL9A1P20849 921 aa15.49■□□□□ 0.07
RTN1-203ENST00000395090 TTC13Q8NBP0 860 aa15.49■□□□□ 0.07
RTN1-203ENST00000395090 PRR36Q9H6K5 1346 aa15.49■□□□□ 0.07
RTN1-203ENST00000395090 NKTRP30414 1462 aaKnown RBP15.48■□□□□ 0.07
RTN1-203ENST00000395090 CD163L1Q9NR16 1453 aa15.48■□□□□ 0.07
RTN1-203ENST00000395090 OATP04181 439 aa15.48■□□□□ 0.07
RTN1-203ENST00000395090 PPP1R3GB7ZBB8 358 aa15.47■□□□□ 0.07
RTN1-203ENST00000395090 FAM161AQ3B820 660 aa15.47■□□□□ 0.07
RTN1-203ENST00000395090 PROSER2Q86WR7 435 aaPredicted RBP15.47■□□□□ 0.07
RTN1-203ENST00000395090 PLEKHG3A1L390 1219 aa15.46■□□□□ 0.07
RTN1-203ENST00000395090 ADGRG1Q9Y653 693 aa15.46■□□□□ 0.07
RTN1-203ENST00000395090 ATP7BP35670 1465 aa15.46■□□□□ 0.07
RTN1-203ENST00000395090 A0A1W2PP64 1363 aa15.46■□□□□ 0.07
RTN1-203ENST00000395090 CPSF1Q10570 1443 aaKnown RBP15.46■□□□□ 0.07
RTN1-203ENST00000395090 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
RTN1-203ENST00000395090 METTL3Q86U44 580 aaKnown RBP15.46■□□□□ 0.06
RTN1-203ENST00000395090 IL27Q8NEV9 243 aa15.46■□□□□ 0.06
RTN1-203ENST00000395090 GTF3C3Q9Y5Q9 886 aa15.46■□□□□ 0.06
RTN1-203ENST00000395090 PPIP5K1Q6PFW1 1433 aa15.45■□□□□ 0.06
RTN1-203ENST00000395090 ADGRL3Q9HAR2 1447 aa15.45■□□□□ 0.06
RTN1-203ENST00000395090 CC2D1BQ5T0F9 858 aaKnown RBP15.45■□□□□ 0.06
RTN1-203ENST00000395090 HDGFL2Q7Z4V5 671 aaPredicted RBP15.45■□□□□ 0.06
RTN1-203ENST00000395090 NSD3Q9BZ95 1437 aa15.44■□□□□ 0.06
RTN1-203ENST00000395090 PHOX2BQ99453 314 aa15.44■□□□□ 0.06
RTN1-203ENST00000395090 ANKARQ7Z5J8 1434 aa15.44■□□□□ 0.06
RTN1-203ENST00000395090 CGNL1Q0VF96 1302 aa15.43■□□□□ 0.06
RTN1-203ENST00000395090 MYBBP1AQ9BQG0 1328 aaKnown RBP15.43■□□□□ 0.06
RTN1-203ENST00000395090 C19orf44Q9H6X5 657 aa15.43■□□□□ 0.06
RTN1-203ENST00000395090 CDC42BPGQ6DT37 1551 aa15.42■□□□□ 0.06
RTN1-203ENST00000395090 USP32Q8NFA0 1604 aa15.42■□□□□ 0.06
RTN1-203ENST00000395090 STRCP1A6NGW2 1772 aa15.42■□□□□ 0.06
RTN1-203ENST00000395090 ST18O60284 1047 aa15.42■□□□□ 0.06
RTN1-203ENST00000395090 CLCN1P35523 988 aa15.42■□□□□ 0.06
RTN1-203ENST00000395090 CCDC184Q52MB2 194 aa15.42■□□□□ 0.06
RTN1-203ENST00000395090 GIGYF2Q6Y7W6 1299 aaKnown RBP15.42■□□□□ 0.06
RTN1-203ENST00000395090 PXYLP1Q8TE99 480 aa15.42■□□□□ 0.06
RTN1-203ENST00000395090 ERBB3P21860 1342 aa15.42■□□□□ 0.06
RTN1-203ENST00000395090 CNGB1Q14028 1251 aaPredicted RBP15.41■□□□□ 0.06
RTN1-203ENST00000395090 KCNK17Q96T54 332 aa15.41■□□□□ 0.06
RTN1-203ENST00000395090 FAM117AQ9C073 453 aa15.41■□□□□ 0.06
RTN1-203ENST00000395090 NALCNQ8IZF0 1738 aa15.41■□□□□ 0.06
RTN1-203ENST00000395090 NSD2O96028 1365 aa15.4■□□□□ 0.06
RTN1-203ENST00000395090 TMEM94Q12767 1356 aa15.4■□□□□ 0.06
RTN1-203ENST00000395090 MDM2Q00987 491 aaPredicted RBP15.4■□□□□ 0.06
RTN1-203ENST00000395090 DDRGK1Q96HY6 314 aa15.4■□□□□ 0.06
RTN1-203ENST00000395090 FMN2Q9NZ56 1722 aa15.4■□□□□ 0.06
RTN1-203ENST00000395090 TOPAZ1Q8N9V7 1692 aa15.4■□□□□ 0.06
RTN1-203ENST00000395090 FYB1O15117 783 aa15.39■□□□□ 0.05
RTN1-203ENST00000395090 NLRP13Q86W25 1043 aa15.39■□□□□ 0.05
RTN1-203ENST00000395090 RBM46Q8TBY0 533 aaKnown RBP15.39■□□□□ 0.05
RTN1-203ENST00000395090 GPCPD1Q9NPB8 672 aa15.39■□□□□ 0.05
RTN1-203ENST00000395090 POLR3AO14802 1390 aaPredicted RBP15.39■□□□□ 0.05
RTN1-203ENST00000395090 BRD4O60885 1362 aaPredicted RBP15.39■□□□□ 0.05
RTN1-203ENST00000395090 ACEP12821 1306 aa15.39■□□□□ 0.05
RTN1-203ENST00000395090 REPIN1Q9BWE0 567 aaKnown RBP15.39■□□□□ 0.05
RTN1-203ENST00000395090 FAM198AQ9UFP1 575 aa15.39■□□□□ 0.05
RTN1-203ENST00000395090 VARS2Q5ST30 1063 aaKnown RBP15.38■□□□□ 0.05
RTN1-203ENST00000395090 C14orf37Q86TY3 774 aa15.38■□□□□ 0.05
RTN1-203ENST00000395090 TMUB1Q9BVT8 246 aa15.38■□□□□ 0.05
RTN1-203ENST00000395090 MRS2Q9HD23 443 aa15.38■□□□□ 0.05
RTN1-203ENST00000395090 TSKSQ9UJT2 592 aa15.38■□□□□ 0.05
RTN1-203ENST00000395090 EDC4Q6P2E9 1401 aaKnown RBP15.37■□□□□ 0.05
RTN1-203ENST00000395090 ZNF335Q9H4Z2 1342 aaPredicted RBP15.37■□□□□ 0.05
RTN1-203ENST00000395090 PPP2R1AP30153 589 aa15.37■□□□□ 0.05
RTN1-203ENST00000395090 EMP3P54852 163 aa15.37■□□□□ 0.05
RTN1-203ENST00000395090 DCCP43146 1447 aa15.36■□□□□ 0.05
RTN1-203ENST00000395090 TRIM6-TRIM34B2RNG4 842 aa15.35■□□□□ 0.05
RTN1-203ENST00000395090 MORC1Q86VD1 984 aa15.35■□□□□ 0.05
RTN1-203ENST00000395090 SSH2Q76I76 1423 aa15.35■□□□□ 0.05
RTN1-203ENST00000395090 PNISRQ8TF01 805 aaKnown RBP15.35■□□□□ 0.05
RTN1-203ENST00000395090 AKAP12Q02952 1782 aa15.35■□□□□ 0.05
RTN1-203ENST00000395090 ITSN1Q15811 1721 aa15.35■□□□□ 0.05
RTN1-203ENST00000395090 LRRC7Q96NW7 1537 aa15.34■□□□□ 0.05
RTN1-203ENST00000395090 RGPD8O14715 1765 aaPredicted RBP15.34■□□□□ 0.05
RTN1-203ENST00000395090 USP6P35125 1406 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms