RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 CABP4P57796 275 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 DRC1Q96MC2 740 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 SF3B2Q13435 895 aaKnown RBP14.36□□□□□ -0.11
SIN3A-202ENST00000394947 CCDC96Q2M329 555 aa14.36□□□□□ -0.11
SIN3A-202ENST00000394947 MTERF4Q7Z6M4 381 aaKnown RBP14.36□□□□□ -0.11
SIN3A-202ENST00000394947 FAM107BQ9H098 131 aa14.36□□□□□ -0.11
SIN3A-202ENST00000394947 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
SIN3A-202ENST00000394947 DESP17661 470 aa14.36□□□□□ -0.11
SIN3A-202ENST00000394947 PIP4K2AP48426 406 aaPredicted RBP14.36□□□□□ -0.11
SIN3A-202ENST00000394947 ARHGAP29Q52LW3 1261 aa14.36□□□□□ -0.11
SIN3A-202ENST00000394947 FERMT3Q86UX7 667 aa14.36□□□□□ -0.11
SIN3A-202ENST00000394947 CCDC148Q8NFR7 591 aa14.36□□□□□ -0.11
SIN3A-202ENST00000394947 DDX23Q9BUQ8 820 aaKnown RBP14.36□□□□□ -0.11
SIN3A-202ENST00000394947 PDRG1Q9NUG6 133 aa14.36□□□□□ -0.11
SIN3A-202ENST00000394947 ADAMTS8Q9UP79 889 aa14.36□□□□□ -0.11
SIN3A-202ENST00000394947 TMEM87AQ8NBN3 555 aa14.36□□□□□ -0.11
SIN3A-202ENST00000394947 XPCQ01831 940 aaPredicted RBP14.35□□□□□ -0.11
SIN3A-202ENST00000394947 NUTM1Q86Y26 1132 aa14.35□□□□□ -0.11
SIN3A-202ENST00000394947 IDH1O75874 414 aaKnown RBP14.35□□□□□ -0.11
SIN3A-202ENST00000394947 ABCF2Q9UG63 623 aa14.35□□□□□ -0.11
SIN3A-202ENST00000394947 NOL7Q9UMY1 257 aaKnown RBP14.35□□□□□ -0.11
SIN3A-202ENST00000394947 GNAI2P04899 355 aa14.35□□□□□ -0.11
SIN3A-202ENST00000394947 MBD3O95983 291 aa14.35□□□□□ -0.11
SIN3A-202ENST00000394947 UBAC1Q9BSL1 405 aa14.35□□□□□ -0.11
SIN3A-202ENST00000394947 MINDY4BA8MYZ0 360 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 CBFA2T2O43439 604 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 STAMBPO95630 424 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 LRP2BPQ9P2M1 347 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 KIF7Q2M1P5 1343 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 MTHFSP49914 203 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 PRPF4BQ13523 1007 aaKnown RBP14.34□□□□□ -0.11
SIN3A-202ENST00000394947 TMCO4Q5TGY1 634 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 CRACR2AQ9BSW2 395 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 JMYQ8N9B5 988 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 RAD54L2Q9Y4B4 1467 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 TTLL12Q14166 644 aaPredicted RBP14.34□□□□□ -0.11
SIN3A-202ENST00000394947 PRKAR2BP31323 418 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 NACAP1Q9BZK3 213 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 CCDC57Q2TAC2 916 aa14.34□□□□□ -0.11
SIN3A-202ENST00000394947 BMP2KQ9NSY1 1161 aaPredicted RBP14.34□□□□□ -0.11
SIN3A-202ENST00000394947 PDCL2Q8N4E4 241 aa14.33□□□□□ -0.11
SIN3A-202ENST00000394947 SHTN1A0MZ66 631 aa14.33□□□□□ -0.12
SIN3A-202ENST00000394947 ARL1P40616 181 aaPredicted RBP14.33□□□□□ -0.12
SIN3A-202ENST00000394947 USP8P40818 1118 aa14.33□□□□□ -0.12
SIN3A-202ENST00000394947 KRT85P78386 507 aa14.33□□□□□ -0.12
SIN3A-202ENST00000394947 TWISTNBQ3B726 338 aaPredicted RBP14.33□□□□□ -0.12
SIN3A-202ENST00000394947 NUP62CLQ9H1M0 184 aa14.33□□□□□ -0.12
SIN3A-202ENST00000394947 URI1O94763 535 aaPredicted RBP14.33□□□□□ -0.12
SIN3A-202ENST00000394947 CASTP20810 708 aaKnown RBP14.33□□□□□ -0.12
SIN3A-202ENST00000394947 LARP1Q6PKG0 1096 aaKnown RBP14.33□□□□□ -0.12
SIN3A-202ENST00000394947 CCDC144CPQ8IYA2 1237 aa14.33□□□□□ -0.12
SIN3A-202ENST00000394947 PDCP20941 246 aa14.33□□□□□ -0.12
SIN3A-202ENST00000394947 MIS18AQ9NYP9 233 aa14.33□□□□□ -0.12
SIN3A-202ENST00000394947 PUF60Q9UHX1 559 aaKnown RBP14.33□□□□□ -0.12
SIN3A-202ENST00000394947 IQCEQ6IPM2 695 aa14.32□□□□□ -0.12
SIN3A-202ENST00000394947 CTNNA2P26232 953 aa14.32□□□□□ -0.12
SIN3A-202ENST00000394947 TOM1L2Q6ZVM7 507 aa14.32□□□□□ -0.12
SIN3A-202ENST00000394947 CACNA2D4Q7Z3S7 1137 aa14.32□□□□□ -0.12
SIN3A-202ENST00000394947 LUZP1Q86V48 1076 aa14.32□□□□□ -0.12
SIN3A-202ENST00000394947 ZNF397Q8NF99 534 aaPredicted RBP14.32□□□□□ -0.12
SIN3A-202ENST00000394947 ZHX1Q9UKY1 873 aaPredicted RBP14.32□□□□□ -0.12
SIN3A-202ENST00000394947 ZNF354CQ86Y25 554 aa14.32□□□□□ -0.12
SIN3A-202ENST00000394947 PAIP2Q9BPZ3 127 aaKnown RBP14.31□□□□□ -0.12
SIN3A-202ENST00000394947 K7ELQ4 463 aaPredicted RBP14.31□□□□□ -0.12
SIN3A-202ENST00000394947 SMARCA5O60264 1052 aaPredicted RBP14.31□□□□□ -0.12
SIN3A-202ENST00000394947 GRM1Q13255 1194 aa14.31□□□□□ -0.12
SIN3A-202ENST00000394947 SPA17Q15506 151 aa14.31□□□□□ -0.12
SIN3A-202ENST00000394947 GRIPAP1Q4V328 841 aa14.31□□□□□ -0.12
SIN3A-202ENST00000394947 CCDC83Q8IWF9 413 aa14.31□□□□□ -0.12
SIN3A-202ENST00000394947 ZSWIM4Q9H7M6 989 aa14.31□□□□□ -0.12
SIN3A-202ENST00000394947 UBXN4Q92575 508 aa14.31□□□□□ -0.12
SIN3A-202ENST00000394947 HIP1O00291 1037 aa14.31□□□□□ -0.12
SIN3A-202ENST00000394947 GTF2F1P35269 517 aaKnown RBP eCLIP14.3□□□□□ -0.121e-7■■■■■ 32.5
SIN3A-202ENST00000394947 HDGFL1Q5TGJ6 251 aa14.3□□□□□ -0.12
SIN3A-202ENST00000394947 RAB11FIP4Q86YS3 637 aa14.3□□□□□ -0.12
SIN3A-202ENST00000394947 CGNQ9P2M7 1197 aaKnown RBP14.3□□□□□ -0.12
SIN3A-202ENST00000394947 SKAP1Q86WV1 359 aa14.3□□□□□ -0.12
SIN3A-202ENST00000394947 TDRD12Q587J7 1177 aaKnown RBP14.3□□□□□ -0.12
SIN3A-202ENST00000394947 GNAI3P08754 354 aa14.29□□□□□ -0.12
SIN3A-202ENST00000394947 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
SIN3A-202ENST00000394947 MRPS9P82933 396 aaKnown RBP14.29□□□□□ -0.12
SIN3A-202ENST00000394947 HLTFQ14527 1009 aaKnown RBP eCLIP14.29□□□□□ -0.12
SIN3A-202ENST00000394947 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
SIN3A-202ENST00000394947 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
SIN3A-202ENST00000394947 KIF4BQ2VIQ3 1234 aa14.29□□□□□ -0.12
SIN3A-202ENST00000394947 BLOC1S2Q6QNY1 142 aa14.29□□□□□ -0.12
SIN3A-202ENST00000394947 RGS22Q8NE09 1264 aa14.29□□□□□ -0.12
SIN3A-202ENST00000394947 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
SIN3A-202ENST00000394947 CCDC160A6NGH7 325 aa14.29□□□□□ -0.12
SIN3A-202ENST00000394947 POLR3DP05423 398 aaPredicted RBP14.29□□□□□ -0.12
SIN3A-202ENST00000394947 FERMT2Q96AC1 680 aa14.29□□□□□ -0.12
SIN3A-202ENST00000394947 TCP11L2Q8N4U5 519 aa14.28□□□□□ -0.12
SIN3A-202ENST00000394947 WDR33Q9C0J8 1336 aaKnown RBP14.28□□□□□ -0.12
SIN3A-202ENST00000394947 BIN1O00499 593 aa14.28□□□□□ -0.12
SIN3A-202ENST00000394947 SPECC1Q5M775 1068 aa14.28□□□□□ -0.12
SIN3A-202ENST00000394947 PANK2Q9BZ23 570 aa14.28□□□□□ -0.12
SIN3A-202ENST00000394947 UACAQ9BZF9 1416 aa14.28□□□□□ -0.12
SIN3A-202ENST00000394947 CRACR2BQ8N4Y2 399 aaPredicted RBP14.27□□□□□ -0.12
SIN3A-202ENST00000394947 LMAN1P49257 510 aa14.27□□□□□ -0.12
SIN3A-202ENST00000394947 MAATS1Q7Z4T9 603 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms