RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 NKTRP30414 1462 aaKnown RBP15.47■□□□□ 0.07
LCA5-202ENST00000392959 CDKL5O76039 1030 aa15.47■□□□□ 0.07
LCA5-202ENST00000392959 FKBP4Q02790 459 aaKnown RBP eCLIP15.47■□□□□ 0.07
LCA5-202ENST00000392959 STK11IPQ8N1F8 1099 aa15.47■□□□□ 0.07
LCA5-202ENST00000392959 GNL3LQ9NVN8 582 aaKnown RBP15.47■□□□□ 0.07
LCA5-202ENST00000392959 MYL6BP14649 208 aa15.46■□□□□ 0.07
LCA5-202ENST00000392959 NUTM1Q86Y26 1132 aa15.46■□□□□ 0.07
LCA5-202ENST00000392959 KIF1BPQ96EK5 621 aa15.46■□□□□ 0.07
LCA5-202ENST00000392959 LUC7LQ9NQ29 371 aaKnown RBP15.46■□□□□ 0.07
LCA5-202ENST00000392959 CCDC69A6NI79 296 aa15.46■□□□□ 0.07
LCA5-202ENST00000392959 GLRX3O76003 335 aaKnown RBP15.46■□□□□ 0.07
LCA5-202ENST00000392959 CCDC57Q2TAC2 916 aa15.46■□□□□ 0.07
LCA5-202ENST00000392959 ZSCAN25Q6NSZ9 544 aa15.46■□□□□ 0.07
LCA5-202ENST00000392959 LRPPRCP42704 1394 aaKnown RBP15.46■□□□□ 0.07
LCA5-202ENST00000392959 ABCC11Q96J66 1382 aa15.46■□□□□ 0.07
LCA5-202ENST00000392959 SKIDA1Q1XH10 827 aa15.46■□□□□ 0.06
LCA5-202ENST00000392959 EIF3JO75822 258 aaKnown RBP15.45■□□□□ 0.06
LCA5-202ENST00000392959 KRT18P05783 430 aaKnown RBP15.45■□□□□ 0.06
LCA5-202ENST00000392959 RDXP35241 583 aaKnown RBP15.45■□□□□ 0.06
LCA5-202ENST00000392959 CABP4P57796 275 aa15.45■□□□□ 0.06
LCA5-202ENST00000392959 PDCL2Q8N4E4 241 aa15.45■□□□□ 0.06
LCA5-202ENST00000392959 DDX11Q96FC9 970 aa15.45■□□□□ 0.06
LCA5-202ENST00000392959 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
LCA5-202ENST00000392959 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
LCA5-202ENST00000392959 CCDC83Q8IWF9 413 aa15.45■□□□□ 0.06
LCA5-202ENST00000392959 NUP133Q8WUM0 1156 aa15.45■□□□□ 0.06
LCA5-202ENST00000392959 DEF6Q9H4E7 631 aa15.45■□□□□ 0.06
LCA5-202ENST00000392959 SMTNL1A8MU46 457 aa15.45■□□□□ 0.06
LCA5-202ENST00000392959 UBXN4Q92575 508 aa15.44■□□□□ 0.06
LCA5-202ENST00000392959 TNPO1Q92973 898 aaKnown RBP15.44■□□□□ 0.06
LCA5-202ENST00000392959 NOL7Q9UMY1 257 aaKnown RBP15.44■□□□□ 0.06
LCA5-202ENST00000392959 SMARCA5O60264 1052 aaPredicted RBP15.44■□□□□ 0.06
LCA5-202ENST00000392959 SSFA2P28290 1259 aa15.44■□□□□ 0.06
LCA5-202ENST00000392959 SCAND2PQ9GZW5 306 aaPredicted RBP15.44■□□□□ 0.06
LCA5-202ENST00000392959 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
LCA5-202ENST00000392959 CCDC181Q5TID7 509 aa15.43■□□□□ 0.06
LCA5-202ENST00000392959 HECW1Q76N89 1606 aa15.43■□□□□ 0.06
LCA5-202ENST00000392959 CCDC183Q5T5S1 534 aa15.43■□□□□ 0.06
LCA5-202ENST00000392959 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
LCA5-202ENST00000392959 BTBD11A6QL63 1104 aa15.43■□□□□ 0.06
LCA5-202ENST00000392959 CAMK4Q16566 473 aa15.43■□□□□ 0.06
LCA5-202ENST00000392959 CFAP100Q494V2 611 aa15.42■□□□□ 0.06
LCA5-202ENST00000392959 PROSER2Q86WR7 435 aaPredicted RBP15.42■□□□□ 0.06
LCA5-202ENST00000392959 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
LCA5-202ENST00000392959 KIF2AO00139 706 aaPredicted RBP15.42■□□□□ 0.06
LCA5-202ENST00000392959 SPG7Q9UQ90 795 aa15.42■□□□□ 0.06
LCA5-202ENST00000392959 GOLGA6L10A6NI86 522 aa15.42■□□□□ 0.06
LCA5-202ENST00000392959 RAB11FIP3O75154 756 aa15.42■□□□□ 0.06
LCA5-202ENST00000392959 PRPF40BQ6NWY9 871 aaKnown RBP15.42■□□□□ 0.06
LCA5-202ENST00000392959 MIS18AQ9NYP9 233 aa15.42■□□□□ 0.06
LCA5-202ENST00000392959 SFPQP23246 707 aaKnown RBP eCLIP15.42■□□□□ 0.06
LCA5-202ENST00000392959 MCM10Q7L590 875 aa15.42■□□□□ 0.06
LCA5-202ENST00000392959 MPHOSPH8Q99549 860 aa15.42■□□□□ 0.06
LCA5-202ENST00000392959 NCOA1Q15788 1441 aa15.42■□□□□ 0.06
LCA5-202ENST00000392959 ERLIN2O94905 339 aa15.41■□□□□ 0.06
LCA5-202ENST00000392959 TXLNBQ8N3L3 684 aa15.41■□□□□ 0.06
LCA5-202ENST00000392959 GNAT3A8MTJ3 354 aa15.41■□□□□ 0.06
LCA5-202ENST00000392959 TRIM27P14373 513 aa15.41■□□□□ 0.06
LCA5-202ENST00000392959 SYCP1Q15431 976 aa15.41■□□□□ 0.06
LCA5-202ENST00000392959 SH2B1Q9NRF2 756 aaPredicted RBP15.41■□□□□ 0.06
LCA5-202ENST00000392959 UBAC1Q9BSL1 405 aa15.41■□□□□ 0.06
LCA5-202ENST00000392959 PTPN14Q15678 1187 aa15.41■□□□□ 0.06
LCA5-202ENST00000392959 THEMISQ8N1K5 641 aaPredicted RBP15.41■□□□□ 0.06
LCA5-202ENST00000392959 NUDT16Q96DE0 195 aaKnown RBP15.4■□□□□ 0.06
LCA5-202ENST00000392959 ARHGAP29Q52LW3 1261 aa15.4■□□□□ 0.06
LCA5-202ENST00000392959 SLC26A8Q96RN1 970 aa15.4■□□□□ 0.06
LCA5-202ENST00000392959 TANGO6Q9C0B7 1094 aa15.4■□□□□ 0.06
LCA5-202ENST00000392959 STRN4Q9NRL3 753 aa15.4■□□□□ 0.06
LCA5-202ENST00000392959 KIAA0754O94854 1291 aa15.39■□□□□ 0.05
LCA5-202ENST00000392959 TDO2P48775 406 aa15.39■□□□□ 0.05
LCA5-202ENST00000392959 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
LCA5-202ENST00000392959 IMMTQ16891 758 aaKnown RBP15.39■□□□□ 0.05
LCA5-202ENST00000392959 U3KPZ7 1027 aaPredicted RBP15.39■□□□□ 0.05
LCA5-202ENST00000392959 EPRSP07814 1512 aaKnown RBP15.39■□□□□ 0.05
LCA5-202ENST00000392959 EPB41L2O43491 1005 aaKnown RBP15.39■□□□□ 0.05
LCA5-202ENST00000392959 WASF1Q92558 559 aa15.39■□□□□ 0.05
LCA5-202ENST00000392959 ANO10Q9NW15 660 aa15.39■□□□□ 0.05
LCA5-202ENST00000392959 BMP2KLQ5H9B9 411 aa15.39■□□□□ 0.05
LCA5-202ENST00000392959 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
LCA5-202ENST00000392959 DDX54Q8TDD1 881 aaKnown RBP15.39■□□□□ 0.05
LCA5-202ENST00000392959 ZHX3Q9H4I2 956 aa15.39■□□□□ 0.05
LCA5-202ENST00000392959 USP25Q9UHP3 1055 aa15.38■□□□□ 0.05
LCA5-202ENST00000392959 LIMCH1Q9UPQ0 1083 aa15.38■□□□□ 0.05
LCA5-202ENST00000392959 PLEKHH1Q9ULM0 1364 aa15.38■□□□□ 0.05
LCA5-202ENST00000392959 TMCO3Q6UWJ1 677 aa15.38■□□□□ 0.05
LCA5-202ENST00000392959 TOM1L2Q6ZVM7 507 aa15.38■□□□□ 0.05
LCA5-202ENST00000392959 KIF18AQ8NI77 898 aa15.38■□□□□ 0.05
LCA5-202ENST00000392959 TBC1D32Q96NH3 1257 aa15.37■□□□□ 0.05
LCA5-202ENST00000392959 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
LCA5-202ENST00000392959 IDH1O75874 414 aaKnown RBP15.37■□□□□ 0.05
LCA5-202ENST00000392959 BOLA2Q9H3K6 86 aa15.37■□□□□ 0.05
LCA5-202ENST00000392959 LRRFIP2Q9Y608 721 aaKnown RBP15.37■□□□□ 0.05
LCA5-202ENST00000392959 IQCEQ6IPM2 695 aa15.37■□□□□ 0.05
LCA5-202ENST00000392959 CCDC102AQ96A19 550 aa15.36■□□□□ 0.05
LCA5-202ENST00000392959 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
LCA5-202ENST00000392959 F6X3S4 739 aa15.36■□□□□ 0.05
LCA5-202ENST00000392959 ATP2B2Q01814 1243 aa15.36■□□□□ 0.05
LCA5-202ENST00000392959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■■■■ 149.1
LCA5-202ENST00000392959 CDK13Q14004 1512 aaKnown RBP15.36■□□□□ 0.05
LCA5-202ENST00000392959 RAPGEF3O95398 923 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms