RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 CD163L1Q9NR16 1453 aa13.68□□□□□ -0.22
TRAV13-2-201ENST00000390439 A0A1W2PP64 1363 aa13.68□□□□□ -0.22
TRAV13-2-201ENST00000390439 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
TRAV13-2-201ENST00000390439 HOXC9P31274 260 aa13.67□□□□□ -0.22
TRAV13-2-201ENST00000390439 KCNQ4P56696 695 aa13.67□□□□□ -0.22
TRAV13-2-201ENST00000390439 CGNL1Q0VF96 1302 aa13.66□□□□□ -0.22
TRAV13-2-201ENST00000390439 MAP3K19Q56UN5 1328 aa13.66□□□□□ -0.22
TRAV13-2-201ENST00000390439 RAPGEF4Q8WZA2 1011 aa13.66□□□□□ -0.22
TRAV13-2-201ENST00000390439 USP47Q96K76 1375 aa13.66□□□□□ -0.22
TRAV13-2-201ENST00000390439 USP54Q70EL1 1684 aa13.66□□□□□ -0.22
TRAV13-2-201ENST00000390439 LTN1O94822 1766 aa13.66□□□□□ -0.22
TRAV13-2-201ENST00000390439 FLAD1Q8NFF5 587 aa13.65□□□□□ -0.22
TRAV13-2-201ENST00000390439 NLGN2Q8NFZ4 835 aa13.65□□□□□ -0.22
TRAV13-2-201ENST00000390439 TONSLQ96HA7 1378 aa13.64□□□□□ -0.23
TRAV13-2-201ENST00000390439 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
TRAV13-2-201ENST00000390439 COL23A1Q86Y22 540 aaPredicted RBP13.63□□□□□ -0.23
TRAV13-2-201ENST00000390439 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
TRAV13-2-201ENST00000390439 SMG6Q86US8 1419 aaKnown RBP13.62□□□□□ -0.23
TRAV13-2-201ENST00000390439 RTL1A6NKG5 1358 aa13.61□□□□□ -0.23
TRAV13-2-201ENST00000390439 FAM208AQ9UK61 1670 aaKnown RBP13.61□□□□□ -0.23
TRAV13-2-201ENST00000390439 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
TRAV13-2-201ENST00000390439 FBLN1P23142 703 aa13.61□□□□□ -0.23
TRAV13-2-201ENST00000390439 NBPF6Q5VWK0 638 aa13.61□□□□□ -0.23
TRAV13-2-201ENST00000390439 NBPF4Q96M43 638 aa13.61□□□□□ -0.23
TRAV13-2-201ENST00000390439 NSD2O96028 1365 aa13.6□□□□□ -0.23
TRAV13-2-201ENST00000390439 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAV13-2-201ENST00000390439 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
TRAV13-2-201ENST00000390439 QSER1Q2KHR3 1735 aa13.6□□□□□ -0.23
TRAV13-2-201ENST00000390439 MSL1Q68DK7 614 aa13.6□□□□□ -0.23
TRAV13-2-201ENST00000390439 SMARCC1Q92922 1105 aaPredicted RBP13.6□□□□□ -0.23
TRAV13-2-201ENST00000390439 TESK2Q96S53 571 aa13.59□□□□□ -0.23
TRAV13-2-201ENST00000390439 PCDH11XQ9BZA7 1347 aa13.59□□□□□ -0.23
TRAV13-2-201ENST00000390439 PCDH11YQ9BZA8 1340 aa13.59□□□□□ -0.23
TRAV13-2-201ENST00000390439 FYB1O15117 783 aa13.58□□□□□ -0.24
TRAV13-2-201ENST00000390439 TMF1P82094 1093 aa13.58□□□□□ -0.24
TRAV13-2-201ENST00000390439 MPRIPQ6WCQ1 1025 aa13.58□□□□□ -0.24
TRAV13-2-201ENST00000390439 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.24
TRAV13-2-201ENST00000390439 AK7Q96M32 723 aa13.58□□□□□ -0.24
TRAV13-2-201ENST00000390439 GPBP1L1Q9HC44 474 aaPredicted RBP13.58□□□□□ -0.24
TRAV13-2-201ENST00000390439 MEGF6O75095 1541 aa13.58□□□□□ -0.24
TRAV13-2-201ENST00000390439 CDCA8Q53HL2 280 aa13.57□□□□□ -0.24
TRAV13-2-201ENST00000390439 GGNBP2Q9H3C7 697 aa13.57□□□□□ -0.24
TRAV13-2-201ENST00000390439 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
TRAV13-2-201ENST00000390439 PALLDQ8WX93 1383 aa13.56□□□□□ -0.24
TRAV13-2-201ENST00000390439 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
TRAV13-2-201ENST00000390439 COL24A1Q17RW2 1714 aa13.55□□□□□ -0.24
TRAV13-2-201ENST00000390439 DOT1LQ8TEK3 1739 aa13.55□□□□□ -0.24
TRAV13-2-201ENST00000390439 INSRP06213 1382 aa13.55□□□□□ -0.24
TRAV13-2-201ENST00000390439 LY75O60449 1722 aa13.54□□□□□ -0.24
TRAV13-2-201ENST00000390439 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
TRAV13-2-201ENST00000390439 FLT4P35916 1363 aa13.54□□□□□ -0.24
TRAV13-2-201ENST00000390439 KIF24Q5T7B8 1368 aa13.54□□□□□ -0.24
TRAV13-2-201ENST00000390439 NSD3Q9BZ95 1437 aa13.54□□□□□ -0.24
TRAV13-2-201ENST00000390439 ATP10DQ9P241 1426 aa13.54□□□□□ -0.24
TRAV13-2-201ENST00000390439 CYP27B1O15528 508 aa13.53□□□□□ -0.24
TRAV13-2-201ENST00000390439 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
TRAV13-2-201ENST00000390439 GOLGB1Q14789 3259 aaKnown RBP13.52□□□□□ -0.24
TRAV13-2-201ENST00000390439 PHF14O94880 888 aa13.52□□□□□ -0.25
TRAV13-2-201ENST00000390439 SSFA2P28290 1259 aa13.52□□□□□ -0.25
TRAV13-2-201ENST00000390439 TUBGCP6Q96RT7 1819 aa13.51□□□□□ -0.25
TRAV13-2-201ENST00000390439 SHANK3Q9BYB0 1731 aa13.51□□□□□ -0.25
TRAV13-2-201ENST00000390439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
TRAV13-2-201ENST00000390439 HSPA6P17066 643 aa13.51□□□□□ -0.25
TRAV13-2-201ENST00000390439 ZNF526Q8TF50 670 aaPredicted RBP13.51□□□□□ -0.25
TRAV13-2-201ENST00000390439 PIGBQ92521 554 aa13.51□□□□□ -0.25
TRAV13-2-201ENST00000390439 IGSF1Q8N6C5 1336 aa13.5□□□□□ -0.25
TRAV13-2-201ENST00000390439 PPM1GO15355 546 aaPredicted RBP13.5□□□□□ -0.25
TRAV13-2-201ENST00000390439 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
TRAV13-2-201ENST00000390439 TMOD3Q9NYL9 352 aa13.5□□□□□ -0.25
TRAV13-2-201ENST00000390439 LOC102724428A0A0B4J2F2 783 aa13.49□□□□□ -0.25
TRAV13-2-201ENST00000390439 SIK1P57059 783 aa13.49□□□□□ -0.25
TRAV13-2-201ENST00000390439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAV13-2-201ENST00000390439 RGPD2P0DJD1 1756 aa13.48□□□□□ -0.25
TRAV13-2-201ENST00000390439 GNPATO15228 680 aa13.47□□□□□ -0.25
TRAV13-2-201ENST00000390439 ATP6V1AP38606 617 aa13.47□□□□□ -0.25
TRAV13-2-201ENST00000390439 IFNL2Q8IZJ0 200 aa13.47□□□□□ -0.25
TRAV13-2-201ENST00000390439 EMILIN1Q9Y6C2 1016 aa13.47□□□□□ -0.25
TRAV13-2-201ENST00000390439 C5P01031 1676 aa13.47□□□□□ -0.25
TRAV13-2-201ENST00000390439 ADCY9O60503 1353 aa13.46□□□□□ -0.25
TRAV13-2-201ENST00000390439 WWC3Q9ULE0 1092 aa13.46□□□□□ -0.25
TRAV13-2-201ENST00000390439 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
TRAV13-2-201ENST00000390439 CEP350Q5VT06 3117 aa13.45□□□□□ -0.26
TRAV13-2-201ENST00000390439 TGFB2P61812 414 aa13.45□□□□□ -0.26
TRAV13-2-201ENST00000390439 TRAPPC3LQ5T215 181 aa13.45□□□□□ -0.26
TRAV13-2-201ENST00000390439 NLGN1Q8N2Q7 840 aa13.45□□□□□ -0.26
TRAV13-2-201ENST00000390439 LINC00116Q8NCU8 138 aa13.45□□□□□ -0.26
TRAV13-2-201ENST00000390439 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
TRAV13-2-201ENST00000390439 MMP10P09238 476 aa13.44□□□□□ -0.26
TRAV13-2-201ENST00000390439 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
TRAV13-2-201ENST00000390439 AMIGO3Q86WK7 504 aa13.44□□□□□ -0.26
TRAV13-2-201ENST00000390439 CARD14Q9BXL6 1004 aa13.44□□□□□ -0.26
TRAV13-2-201ENST00000390439 RTCBQ9Y3I0 505 aaKnown RBP13.44□□□□□ -0.26
TRAV13-2-201ENST00000390439 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
TRAV13-2-201ENST00000390439 EYA1Q99502 592 aa13.43□□□□□ -0.26
TRAV13-2-201ENST00000390439 HSP90AB1P08238 724 aaKnown RBP13.42□□□□□ -0.26
TRAV13-2-201ENST00000390439 PHKG2P15735 406 aa13.42□□□□□ -0.26
TRAV13-2-201ENST00000390439 APLP1P51693 650 aa13.42□□□□□ -0.26
TRAV13-2-201ENST00000390439 ITPK1Q13572 414 aa13.42□□□□□ -0.26
TRAV13-2-201ENST00000390439 ATG3Q9NT62 314 aa13.42□□□□□ -0.26
TRAV13-2-201ENST00000390439 BCS1LQ9Y276 419 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms