RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 CFAP74Q9C0B2 1584 aa7.75□□□□□ -1.17
ERCC4-202ENST00000389138 TMEM134Q9H6X4 195 aa7.75□□□□□ -1.17
ERCC4-202ENST00000389138 ZFRQ96KR1 1074 aaKnown RBP7.75□□□□□ -1.17
ERCC4-202ENST00000389138 TMUB1Q9BVT8 246 aa7.75□□□□□ -1.17
ERCC4-202ENST00000389138 LNPKQ9C0E8 428 aa7.75□□□□□ -1.17
ERCC4-202ENST00000389138 EFCAB5A4FU69 1503 aa7.75□□□□□ -1.17
ERCC4-202ENST00000389138 ZFYVE16Q7Z3T8 1539 aa7.74□□□□□ -1.17
ERCC4-202ENST00000389138 VAMP1P23763 118 aa7.74□□□□□ -1.17
ERCC4-202ENST00000389138 EGFLAMQ63HQ2 1017 aa7.74□□□□□ -1.17
ERCC4-202ENST00000389138 ANKK1Q8NFD2 765 aa7.74□□□□□ -1.17
ERCC4-202ENST00000389138 PTPRTO14522 1441 aa7.74□□□□□ -1.17
ERCC4-202ENST00000389138 ARHGEF12Q9NZN5 1544 aa7.74□□□□□ -1.17
ERCC4-202ENST00000389138 SETD1BQ9UPS6 1966 aaKnown RBP7.74□□□□□ -1.17
ERCC4-202ENST00000389138 PSME1Q06323 249 aa7.73□□□□□ -1.17
ERCC4-202ENST00000389138 PHOX2BQ99453 314 aa7.73□□□□□ -1.17
ERCC4-202ENST00000389138 GPCPD1Q9NPB8 672 aa7.73□□□□□ -1.17
ERCC4-202ENST00000389138 AKNAQ7Z591 1439 aa7.73□□□□□ -1.17
ERCC4-202ENST00000389138 GOLGA3Q08378 1498 aa7.72□□□□□ -1.17
ERCC4-202ENST00000389138 PALM3A6NDB9 673 aaPredicted RBP7.72□□□□□ -1.17
ERCC4-202ENST00000389138 SLF2Q8IX21 1173 aa7.72□□□□□ -1.17
ERCC4-202ENST00000389138 SPACA7Q96KW9 195 aa7.72□□□□□ -1.17
ERCC4-202ENST00000389138 TERF2IPQ9NYB0 399 aa7.72□□□□□ -1.17
ERCC4-202ENST00000389138 MYSM1Q5VVJ2 828 aa7.72□□□□□ -1.17
ERCC4-202ENST00000389138 NOP9Q86U38 636 aaKnown RBP7.72□□□□□ -1.17
ERCC4-202ENST00000389138 SULF1Q8IWU6 871 aa7.72□□□□□ -1.17
ERCC4-202ENST00000389138 NME8Q8N427 588 aa7.72□□□□□ -1.17
ERCC4-202ENST00000389138 WNT2BQ93097 391 aa7.72□□□□□ -1.17
ERCC4-202ENST00000389138 LRCH3Q96II8 777 aa7.72□□□□□ -1.17
ERCC4-202ENST00000389138 DENND4BO75064 1496 aaPredicted RBP7.71□□□□□ -1.17
ERCC4-202ENST00000389138 TLDC2A0PJX2 215 aa7.71□□□□□ -1.18
ERCC4-202ENST00000389138 LMOD1P29536 600 aaPredicted RBP7.71□□□□□ -1.18
ERCC4-202ENST00000389138 MCCD1P59942 119 aaPredicted RBP7.71□□□□□ -1.18
ERCC4-202ENST00000389138 MDM2Q00987 491 aaPredicted RBP7.71□□□□□ -1.18
ERCC4-202ENST00000389138 RALBP1Q15311 655 aa7.71□□□□□ -1.18
ERCC4-202ENST00000389138 SWT1Q5T5J6 900 aaKnown RBP7.71□□□□□ -1.18
ERCC4-202ENST00000389138 GPATCH11Q8N954 259 aa7.71□□□□□ -1.18
ERCC4-202ENST00000389138 BEGAINQ9BUH8 593 aa7.71□□□□□ -1.18
ERCC4-202ENST00000389138 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.71□□□□□ -1.18
ERCC4-202ENST00000389138 FHOD3Q2V2M9 1422 aa7.71□□□□□ -1.18
ERCC4-202ENST00000389138 RAPGEF2Q9Y4G8 1499 aa7.71□□□□□ -1.18
ERCC4-202ENST00000389138 C3P01024 1663 aa7.7□□□□□ -1.18
ERCC4-202ENST00000389138 ATG7O95352 703 aa7.7□□□□□ -1.18
ERCC4-202ENST00000389138 SAMD7Q7Z3H4 446 aa7.7□□□□□ -1.18
ERCC4-202ENST00000389138 SPNS2Q8IVW8 549 aa7.7□□□□□ -1.18
ERCC4-202ENST00000389138 NLGN1Q8N2Q7 840 aa7.7□□□□□ -1.18
ERCC4-202ENST00000389138 ATP10BO94823 1461 aa7.7□□□□□ -1.18
ERCC4-202ENST00000389138 UHRF1BP1Q6BDS2 1440 aa7.7□□□□□ -1.18
ERCC4-202ENST00000389138 ANKRD33BA6NCL7 494 aa7.7□□□□□ -1.18
ERCC4-202ENST00000389138 HECW1Q76N89 1606 aa7.69□□□□□ -1.18
ERCC4-202ENST00000389138 SOWAHBA6NEL2 793 aa7.69□□□□□ -1.18
ERCC4-202ENST00000389138 PPFIA4O75335 1185 aa7.69□□□□□ -1.18
ERCC4-202ENST00000389138 CCER1Q8TC90 406 aaPredicted RBP7.69□□□□□ -1.18
ERCC4-202ENST00000389138 MORC4Q8TE76 937 aa7.69□□□□□ -1.18
ERCC4-202ENST00000389138 MAGI2Q86UL8 1455 aa7.69□□□□□ -1.18
ERCC4-202ENST00000389138 CCDC194A0A1B0GVG4 234 aa7.69□□□□□ -1.18
ERCC4-202ENST00000389138 SSTR3P32745 418 aaPredicted RBP7.69□□□□□ -1.18
ERCC4-202ENST00000389138 FAM43BQ6ZT52 329 aaPredicted RBP7.69□□□□□ -1.18
ERCC4-202ENST00000389138 PMM1Q92871 262 aa7.69□□□□□ -1.18
ERCC4-202ENST00000389138 METTL14Q9HCE5 456 aaKnown RBP7.69□□□□□ -1.18
ERCC4-202ENST00000389138 FAN1Q9Y2M0 1017 aa7.69□□□□□ -1.18
ERCC4-202ENST00000389138 TMA7Q9Y2S6 64 aaKnown RBP7.69□□□□□ -1.18
ERCC4-202ENST00000389138 C9orf131Q5VYM1 1079 aa7.68□□□□□ -1.18
ERCC4-202ENST00000389138 UCN2Q96RP3 112 aa7.68□□□□□ -1.18
ERCC4-202ENST00000389138 ERCC5P28715 1186 aaPredicted RBP7.67□□□□□ -1.18
ERCC4-202ENST00000389138 MMRN1Q13201 1228 aa7.67□□□□□ -1.18
ERCC4-202ENST00000389138 AAMPQ13685 434 aa7.67□□□□□ -1.18
ERCC4-202ENST00000389138 PTPROQ16827 1216 aa7.67□□□□□ -1.18
ERCC4-202ENST00000389138 WWC1Q8IX03 1113 aa7.67□□□□□ -1.18
ERCC4-202ENST00000389138 FAM9BQ8IZU0 186 aa7.67□□□□□ -1.18
ERCC4-202ENST00000389138 FAM217BQ9NTX9 383 aaPredicted RBP7.67□□□□□ -1.18
ERCC4-202ENST00000389138 RAPGEF6Q8TEU7 1601 aa7.67□□□□□ -1.18
ERCC4-202ENST00000389138 MARSP56192 900 aaKnown RBP7.67□□□□□ -1.18
ERCC4-202ENST00000389138 TSNAXIP1Q2TAA8 658 aa7.67□□□□□ -1.18
ERCC4-202ENST00000389138 SMC5Q8IY18 1101 aa7.67□□□□□ -1.18
ERCC4-202ENST00000389138 KCNB2Q92953 911 aa7.67□□□□□ -1.18
ERCC4-202ENST00000389138 TSR3Q9UJK0 312 aaKnown RBP7.67□□□□□ -1.18
ERCC4-202ENST00000389138 TBX22Q9Y458 520 aa7.67□□□□□ -1.18
ERCC4-202ENST00000389138 PTMSP20962 102 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 CCDC144BQ3MJ40 725 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 CCDC181Q5TID7 509 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 THSD4Q6ZMP0 1018 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 KCTD12Q96CX2 325 aaKnown RBP7.66□□□□□ -1.18
ERCC4-202ENST00000389138 PIF1Q9H611 641 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 TFIP11Q9UBB9 837 aaKnown RBP7.66□□□□□ -1.18
ERCC4-202ENST00000389138 SUPT6HQ7KZ85 1726 aaKnown RBP7.66□□□□□ -1.18
ERCC4-202ENST00000389138 CLK2P49760 499 aaKnown RBP7.66□□□□□ -1.18
ERCC4-202ENST00000389138 MLECQ14165 292 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 SDE2Q6IQ49 451 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 NLRP7Q8WX94 980 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 PRR14Q9BWN1 585 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 GABBR1Q9UBS5 961 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 NCOA1Q15788 1441 aa7.66□□□□□ -1.18
ERCC4-202ENST00000389138 hCG_2014768A0A024R1R8 64 aa7.65□□□□□ -1.18
ERCC4-202ENST00000389138 DDX11L8A8MPP1 907 aa7.65□□□□□ -1.18
ERCC4-202ENST00000389138 PPP4CP60510 307 aa7.65□□□□□ -1.18
ERCC4-202ENST00000389138 IGBP1P78318 339 aa7.65□□□□□ -1.18
ERCC4-202ENST00000389138 NYAP1Q6ZVC0 841 aa7.65□□□□□ -1.18
ERCC4-202ENST00000389138 FBXO33Q7Z6M2 555 aa7.65□□□□□ -1.18
ERCC4-202ENST00000389138 PIK3R5Q8WYR1 880 aa7.65□□□□□ -1.18
ERCC4-202ENST00000389138 DHX38Q92620 1227 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms