RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 SHANK3Q9BYB0 1731 aa30.36■■■□□ 2.45
CNEP1R1-201ENST00000389134 GRIN3BO60391 1043 aa30.36■■■□□ 2.45
CNEP1R1-201ENST00000389134 NEUROD1Q13562 356 aa30.36■■■□□ 2.45
CNEP1R1-201ENST00000389134 KCNQ4P56696 695 aa30.35■■■□□ 2.45
CNEP1R1-201ENST00000389134 LTV1Q96GA3 475 aaPredicted RBP30.35■■■□□ 2.45
CNEP1R1-201ENST00000389134 RGPD2P0DJD1 1756 aa30.33■■■□□ 2.45
CNEP1R1-201ENST00000389134 A0A1W2PP64 1363 aa30.31■■■□□ 2.44
CNEP1R1-201ENST00000389134 IFFO2Q5TF58 517 aa30.31■■■□□ 2.44
CNEP1R1-201ENST00000389134 CARD11Q9BXL7 1154 aa30.31■■■□□ 2.44
CNEP1R1-201ENST00000389134 ZCRB1Q8TBF4 217 aaKnown RBP30.3■■■□□ 2.44
CNEP1R1-201ENST00000389134 PUS7Q96PZ0 661 aaKnown RBP30.3■■■□□ 2.44
CNEP1R1-201ENST00000389134 CCNL1Q9UK58 526 aaPredicted RBP30.3■■■□□ 2.44
CNEP1R1-201ENST00000389134 NSD2O96028 1365 aa30.29■■■□□ 2.44
CNEP1R1-201ENST00000389134 YBX3P16989 372 aaKnown RBP eCLIP30.28■■■□□ 2.44
CNEP1R1-201ENST00000389134 MSH5O43196 834 aa30.27■■■□□ 2.44
CNEP1R1-201ENST00000389134 HOXC9P31274 260 aa30.25■■■□□ 2.43
CNEP1R1-201ENST00000389134 AMPHP49418 695 aa30.25■■■□□ 2.43
CNEP1R1-201ENST00000389134 COL23A1Q86Y22 540 aaPredicted RBP30.25■■■□□ 2.43
CNEP1R1-201ENST00000389134 COG3Q96JB2 828 aa30.25■■■□□ 2.43
CNEP1R1-201ENST00000389134 MAP3K19Q56UN5 1328 aa30.24■■■□□ 2.43
CNEP1R1-201ENST00000389134 USP47Q96K76 1375 aa30.24■■■□□ 2.43
CNEP1R1-201ENST00000389134 HMGB2P26583 209 aaKnown RBP30.23■■■□□ 2.43
CNEP1R1-201ENST00000389134 MEGF6O75095 1541 aa30.21■■■□□ 2.43
CNEP1R1-201ENST00000389134 TAF1LQ8IZX4 1826 aa30.2■■■□□ 2.43
CNEP1R1-201ENST00000389134 C5P01031 1676 aa30.2■■■□□ 2.42
CNEP1R1-201ENST00000389134 CGNL1Q0VF96 1302 aa30.2■■■□□ 2.42
CNEP1R1-201ENST00000389134 CD2APQ9Y5K6 639 aa30.19■■■□□ 2.42
CNEP1R1-201ENST00000389134 ATP10DQ9P241 1426 aa30.17■■■□□ 2.42
CNEP1R1-201ENST00000389134 MSL1Q68DK7 614 aa30.17■■■□□ 2.42
CNEP1R1-201ENST00000389134 FLAD1Q8NFF5 587 aa30.17■■■□□ 2.42
CNEP1R1-201ENST00000389134 FBLN1P23142 703 aa30.15■■■□□ 2.42
CNEP1R1-201ENST00000389134 RTL1A6NKG5 1358 aa30.15■■■□□ 2.42
CNEP1R1-201ENST00000389134 NBPF6Q5VWK0 638 aa30.13■■■□□ 2.41
CNEP1R1-201ENST00000389134 RAPGEF4Q8WZA2 1011 aa30.13■■■□□ 2.41
CNEP1R1-201ENST00000389134 NBPF4Q96M43 638 aa30.13■■■□□ 2.41
CNEP1R1-201ENST00000389134 GPBP1L1Q9HC44 474 aaPredicted RBP30.13■■■□□ 2.41
CNEP1R1-201ENST00000389134 SLC24A1O60721 1099 aa30.1■■■□□ 2.41
CNEP1R1-201ENST00000389134 ITGB4P16144 1822 aa30.09■■■□□ 2.41
CNEP1R1-201ENST00000389134 SMG6Q86US8 1419 aaKnown RBP30.09■■■□□ 2.41
CNEP1R1-201ENST00000389134 TATP17735 454 aaPredicted RBP30.08■■■□□ 2.41
CNEP1R1-201ENST00000389134 PCDH11XQ9BZA7 1347 aa30.07■■■□□ 2.4
CNEP1R1-201ENST00000389134 PCDH11YQ9BZA8 1340 aa30.07■■■□□ 2.4
CNEP1R1-201ENST00000389134 USHBP1Q8N6Y0 703 aa30.07■■■□□ 2.4
CNEP1R1-201ENST00000389134 ADCY9O60503 1353 aa30.06■■■□□ 2.4
CNEP1R1-201ENST00000389134 PALLDQ8WX93 1383 aa30.06■■■□□ 2.4
CNEP1R1-201ENST00000389134 RRS1Q15050 365 aaKnown RBP30.06■■■□□ 2.4
CNEP1R1-201ENST00000389134 TESK2Q96S53 571 aa30.06■■■□□ 2.4
CNEP1R1-201ENST00000389134 HSPA6P17066 643 aa30.05■■■□□ 2.4
CNEP1R1-201ENST00000389134 UBR3Q6ZT12 1888 aa30.05■■■□□ 2.4
CNEP1R1-201ENST00000389134 C4BP0C0L5 1744 aa30.05■■■□□ 2.4
CNEP1R1-201ENST00000389134 MPRIPQ6WCQ1 1025 aa30.03■■■□□ 2.4
CNEP1R1-201ENST00000389134 SMARCC1Q92922 1105 aaPredicted RBP30.03■■■□□ 2.4
CNEP1R1-201ENST00000389134 AK7Q96M32 723 aa30.02■■■□□ 2.4
CNEP1R1-201ENST00000389134 ST20-MTHFSA0A0A6YYL1 179 aa30.01■■■□□ 2.39
CNEP1R1-201ENST00000389134 FYB1O15117 783 aa30■■■□□ 2.39
CNEP1R1-201ENST00000389134 ZNF526Q8TF50 670 aaPredicted RBP30■■■□□ 2.39
CNEP1R1-201ENST00000389134 NSD3Q9BZ95 1437 aa29.99■■■□□ 2.39
CNEP1R1-201ENST00000389134 INSRP06213 1382 aa29.99■■■□□ 2.39
CNEP1R1-201ENST00000389134 TONSLQ96HA7 1378 aa29.99■■■□□ 2.39
CNEP1R1-201ENST00000389134 TOGARAM1Q9Y4F4 1720 aa29.99■■■□□ 2.39
CNEP1R1-201ENST00000389134 IGSF1Q8N6C5 1336 aa29.98■■■□□ 2.39
CNEP1R1-201ENST00000389134 GGNBP2Q9H3C7 697 aa29.98■■■□□ 2.39
CNEP1R1-201ENST00000389134 CYP27B1O15528 508 aa29.97■■■□□ 2.39
CNEP1R1-201ENST00000389134 HSP90AB2PQ58FF8 381 aa29.97■■■□□ 2.39
CNEP1R1-201ENST00000389134 KIF24Q5T7B8 1368 aa29.95■■■□□ 2.39
CNEP1R1-201ENST00000389134 KIF20BQ96Q89 1820 aa29.95■■■□□ 2.39
CNEP1R1-201ENST00000389134 MAP2P11137 1827 aaKnown RBP29.94■■■□□ 2.38
CNEP1R1-201ENST00000389134 PKD1L3Q7Z443 1732 aa29.94■■■□□ 2.38
CNEP1R1-201ENST00000389134 FLT4P35916 1363 aa29.94■■■□□ 2.38
CNEP1R1-201ENST00000389134 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.93■■■□□ 2.38
CNEP1R1-201ENST00000389134 PHF14O94880 888 aa29.93■■■□□ 2.38
CNEP1R1-201ENST00000389134 SSFA2P28290 1259 aa29.93■■■□□ 2.38
CNEP1R1-201ENST00000389134 AMIGO3Q86WK7 504 aa29.93■■■□□ 2.38
CNEP1R1-201ENST00000389134 PIGBQ92521 554 aa29.91■■■□□ 2.38
CNEP1R1-201ENST00000389134 NKX1-1Q15270 411 aaPredicted RBP29.89■■■□□ 2.38
CNEP1R1-201ENST00000389134 WWC3Q9ULE0 1092 aa29.89■■■□□ 2.38
CNEP1R1-201ENST00000389134 LOC102724428A0A0B4J2F2 783 aa29.87■■■□□ 2.37
CNEP1R1-201ENST00000389134 KIF3CO14782 793 aa29.87■■■□□ 2.37
CNEP1R1-201ENST00000389134 SIK1P57059 783 aa29.87■■■□□ 2.37
CNEP1R1-201ENST00000389134 TMF1P82094 1093 aa29.87■■■□□ 2.37
CNEP1R1-201ENST00000389134 SMIM5Q71RC9 77 aa29.87■■■□□ 2.37
CNEP1R1-201ENST00000389134 KIF13BQ9NQT8 1826 aa29.85■■■□□ 2.37
CNEP1R1-201ENST00000389134 SPG7Q9UQ90 795 aa29.85■■■□□ 2.37
CNEP1R1-201ENST00000389134 CICQ96RK0 1608 aaPredicted RBP29.85■■■□□ 2.37
CNEP1R1-201ENST00000389134 LINC00116Q8NCU8 138 aa29.84■■■□□ 2.37
CNEP1R1-201ENST00000389134 NCAPD2Q15021 1401 aa29.82■■■□□ 2.36
CNEP1R1-201ENST00000389134 TMOD3Q9NYL9 352 aa29.81■■■□□ 2.36
CNEP1R1-201ENST00000389134 N4BP2Q86UW6 1770 aaPredicted RBP29.8■■■□□ 2.36
CNEP1R1-201ENST00000389134 GNPATO15228 680 aa29.8■■■□□ 2.36
CNEP1R1-201ENST00000389134 APLP1P51693 650 aa29.8■■■□□ 2.36
CNEP1R1-201ENST00000389134 CDCA8Q53HL2 280 aa29.79■■■□□ 2.36
CNEP1R1-201ENST00000389134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.79■■■□□ 2.367e-6■■□□□ 12.8
CNEP1R1-201ENST00000389134 EMILIN1Q9Y6C2 1016 aa29.79■■■□□ 2.36
CNEP1R1-201ENST00000389134 MMP10P09238 476 aa29.78■■■□□ 2.36
CNEP1R1-201ENST00000389134 ATP6V1AP38606 617 aa29.78■■■□□ 2.36
CNEP1R1-201ENST00000389134 ASAP1Q9ULH1 1129 aa29.78■■■□□ 2.36
CNEP1R1-201ENST00000389134 TGFB2P61812 414 aa29.77■■■□□ 2.36
CNEP1R1-201ENST00000389134 ITPK1Q13572 414 aa29.77■■■□□ 2.36
CNEP1R1-201ENST00000389134 KIAA1551Q9HCM1 1747 aa29.76■■■□□ 2.35
CNEP1R1-201ENST00000389134 ANKRD26Q9UPS8 1709 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms