RNA–Protein interactions for RNA: ENST00000388882.5

TNFAIP8-202, Transcript of TNF alpha induced protein 8, humanhuman

TSL 4

Gene TNFAIP8, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-202ENST00000388882 TNS2Q63HR2 1409 aa13.77□□□□□ -0.21
TNFAIP8-202ENST00000388882 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
TNFAIP8-202ENST00000388882 KAT6BQ8WYB5 2073 aa13.76□□□□□ -0.21
TNFAIP8-202ENST00000388882 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
TNFAIP8-202ENST00000388882 OVOS2A0A0G2JMS6 1433 aa13.76□□□□□ -0.21
TNFAIP8-202ENST00000388882 HMOX1P09601 288 aa13.76□□□□□ -0.21
TNFAIP8-202ENST00000388882 FAM182BQ5T319 152 aa13.76□□□□□ -0.21
TNFAIP8-202ENST00000388882 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
TNFAIP8-202ENST00000388882 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
TNFAIP8-202ENST00000388882 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
TNFAIP8-202ENST00000388882 DDX54Q8TDD1 881 aaKnown RBP13.75□□□□□ -0.21
TNFAIP8-202ENST00000388882 SPG7Q9UQ90 795 aa13.75□□□□□ -0.21
TNFAIP8-202ENST00000388882 FAM196AQ6ZSG2 479 aa13.74□□□□□ -0.21
TNFAIP8-202ENST00000388882 MARCH10Q8NA82 808 aaPredicted RBP13.74□□□□□ -0.21
TNFAIP8-202ENST00000388882 PCDH11XQ9BZA7 1347 aa13.73□□□□□ -0.21
TNFAIP8-202ENST00000388882 PCDH11YQ9BZA8 1340 aa13.73□□□□□ -0.21
TNFAIP8-202ENST00000388882 PLEKHO1Q53GL0 409 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP8-202ENST00000388882 KDRP35968 1356 aa13.72□□□□□ -0.21
TNFAIP8-202ENST00000388882 AMOTQ4VCS5 1084 aa13.72□□□□□ -0.21
TNFAIP8-202ENST00000388882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
TNFAIP8-202ENST00000388882 PKD1L3Q7Z443 1732 aa13.72□□□□□ -0.21
TNFAIP8-202ENST00000388882 PLEKHG2Q9H7P9 1386 aa13.71□□□□□ -0.21
TNFAIP8-202ENST00000388882 SHANK3Q9BYB0 1731 aa13.71□□□□□ -0.21
TNFAIP8-202ENST00000388882 SOCS7O14512 581 aa13.71□□□□□ -0.21
TNFAIP8-202ENST00000388882 SF3B2Q13435 895 aaKnown RBP13.71□□□□□ -0.21
TNFAIP8-202ENST00000388882 WDR43Q15061 677 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNFAIP8-202ENST00000388882 NEFMP07197 916 aa13.7□□□□□ -0.22
TNFAIP8-202ENST00000388882 FCHSD2O94868 740 aa13.69□□□□□ -0.22
TNFAIP8-202ENST00000388882 PRKAR2BP31323 418 aa13.69□□□□□ -0.22
TNFAIP8-202ENST00000388882 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
TNFAIP8-202ENST00000388882 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
TNFAIP8-202ENST00000388882 IFNL2Q8IZJ0 200 aa13.69□□□□□ -0.22
TNFAIP8-202ENST00000388882 UPF1Q92900 1129 aaKnown RBP eCLIP13.69□□□□□ -0.22
TNFAIP8-202ENST00000388882 PNNQ9H307 717 aaKnown RBP13.69□□□□□ -0.22
TNFAIP8-202ENST00000388882 SBF2Q86WG5 1849 aa13.69□□□□□ -0.22
TNFAIP8-202ENST00000388882 CYP27B1O15528 508 aa13.68□□□□□ -0.22
TNFAIP8-202ENST00000388882 TRIM37O94972 964 aa13.68□□□□□ -0.22
TNFAIP8-202ENST00000388882 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
TNFAIP8-202ENST00000388882 CCDC125Q86Z20 511 aa13.68□□□□□ -0.22
TNFAIP8-202ENST00000388882 ACSBG1Q96GR2 724 aa13.68□□□□□ -0.22
TNFAIP8-202ENST00000388882 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
TNFAIP8-202ENST00000388882 BCL9O00512 1426 aa13.67□□□□□ -0.22
TNFAIP8-202ENST00000388882 PHKG2P15735 406 aa13.67□□□□□ -0.22
TNFAIP8-202ENST00000388882 POTEDQ86YR6 584 aa13.67□□□□□ -0.22
TNFAIP8-202ENST00000388882 MRS2Q9HD23 443 aa13.67□□□□□ -0.22
TNFAIP8-202ENST00000388882 HSP90AB1P08238 724 aaKnown RBP13.66□□□□□ -0.22
TNFAIP8-202ENST00000388882 GAS2L2Q8NHY3 880 aa13.66□□□□□ -0.22
TNFAIP8-202ENST00000388882 SYTL4Q96C24 671 aaPredicted RBP13.66□□□□□ -0.22
TNFAIP8-202ENST00000388882 MAPK8IP3Q9UPT6 1336 aa13.65□□□□□ -0.22
TNFAIP8-202ENST00000388882 DOT1LQ8TEK3 1739 aa13.65□□□□□ -0.22
TNFAIP8-202ENST00000388882 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
TNFAIP8-202ENST00000388882 AKAP4Q5JQC9 854 aa13.65□□□□□ -0.22
TNFAIP8-202ENST00000388882 BCL11BQ9C0K0 894 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP8-202ENST00000388882 NHSQ6T4R5 1651 aa13.64□□□□□ -0.23
TNFAIP8-202ENST00000388882 APBA3O96018 575 aa13.64□□□□□ -0.23
TNFAIP8-202ENST00000388882 NKX1-1Q15270 411 aaPredicted RBP13.64□□□□□ -0.23
TNFAIP8-202ENST00000388882 CCDC184Q52MB2 194 aa13.64□□□□□ -0.23
TNFAIP8-202ENST00000388882 KCNQ2O43526 872 aa13.63□□□□□ -0.23
TNFAIP8-202ENST00000388882 BAG6P46379 1132 aa13.63□□□□□ -0.23
TNFAIP8-202ENST00000388882 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
TNFAIP8-202ENST00000388882 DCAF5Q96JK2 942 aa13.63□□□□□ -0.23
TNFAIP8-202ENST00000388882 PHACTR3Q96KR7 559 aa13.63□□□□□ -0.23
TNFAIP8-202ENST00000388882 ADAMTS8Q9UP79 889 aa13.63□□□□□ -0.23
TNFAIP8-202ENST00000388882 TNS1Q9HBL0 1735 aaKnown RBP13.62□□□□□ -0.23
TNFAIP8-202ENST00000388882 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
TNFAIP8-202ENST00000388882 ITGB4P16144 1822 aa13.62□□□□□ -0.23
TNFAIP8-202ENST00000388882 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
TNFAIP8-202ENST00000388882 GNAT3A8MTJ3 354 aa13.61□□□□□ -0.23
TNFAIP8-202ENST00000388882 CCDC146Q8IYE0 955 aa13.61□□□□□ -0.23
TNFAIP8-202ENST00000388882 PLEKHF1Q96S99 279 aa13.61□□□□□ -0.23
TNFAIP8-202ENST00000388882 BTAF1O14981 1849 aa13.61□□□□□ -0.23
TNFAIP8-202ENST00000388882 MAP3K5Q99683 1374 aa13.6□□□□□ -0.23
TNFAIP8-202ENST00000388882 ERVV-2B6SEH9 535 aa13.6□□□□□ -0.23
TNFAIP8-202ENST00000388882 CABP4P57796 275 aa13.6□□□□□ -0.23
TNFAIP8-202ENST00000388882 PTF1AQ7RTS3 328 aa13.6□□□□□ -0.23
TNFAIP8-202ENST00000388882 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
TNFAIP8-202ENST00000388882 TMOD3Q9NYL9 352 aa13.6□□□□□ -0.23
TNFAIP8-202ENST00000388882 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
TNFAIP8-202ENST00000388882 SCN11AQ9UI33 1791 aa13.6□□□□□ -0.23
TNFAIP8-202ENST00000388882 EN1Q05925 392 aaPredicted RBP13.59□□□□□ -0.23
TNFAIP8-202ENST00000388882 DEFB132Q7Z7B7 95 aa13.59□□□□□ -0.23
TNFAIP8-202ENST00000388882 PNISRQ8TF01 805 aaKnown RBP13.59□□□□□ -0.23
TNFAIP8-202ENST00000388882 RUNDC1Q96C34 613 aa13.59□□□□□ -0.23
TNFAIP8-202ENST00000388882 KDM6AO15550 1401 aaPredicted RBP13.58□□□□□ -0.24
TNFAIP8-202ENST00000388882 CCER2I3L3R5 266 aa13.58□□□□□ -0.24
TNFAIP8-202ENST00000388882 RNMTO43148 476 aaKnown RBP13.58□□□□□ -0.24
TNFAIP8-202ENST00000388882 NFE2L2Q16236 605 aa13.58□□□□□ -0.24
TNFAIP8-202ENST00000388882 DLG5Q8TDM6 1919 aa13.58□□□□□ -0.24
TNFAIP8-202ENST00000388882 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
TNFAIP8-202ENST00000388882 FAM9BQ8IZU0 186 aa13.57□□□□□ -0.24
TNFAIP8-202ENST00000388882 LGR6Q9HBX8 967 aa13.57□□□□□ -0.24
TNFAIP8-202ENST00000388882 PLSCR1O15162 318 aa13.56□□□□□ -0.24
TNFAIP8-202ENST00000388882 HTATSF1O43719 755 aaKnown RBP13.56□□□□□ -0.24
TNFAIP8-202ENST00000388882 TEFQ10587 303 aa13.56□□□□□ -0.24
TNFAIP8-202ENST00000388882 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
TNFAIP8-202ENST00000388882 EZH2Q15910 746 aaKnown RBP13.56□□□□□ -0.24
TNFAIP8-202ENST00000388882 MIER1Q8N108 512 aa13.56□□□□□ -0.24
TNFAIP8-202ENST00000388882 PIGBQ92521 554 aa13.56□□□□□ -0.24
TNFAIP8-202ENST00000388882 RIPK4P57078 832 aa13.55□□□□□ -0.24
TNFAIP8-202ENST00000388882 NFATC2IPQ8NCF5 419 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms