RNA–Protein interactions for RNA: ENST00000384018.1

RNU6-643P-201, Transcript of RNA, U6 small nuclear 643, pseudogene, humanhuman

BASIC

Gene RNU6-643P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-643P-201ENST00000384018 PRICKLE2Q7Z3G6 844 aa4.5□□□□□ -1.69
RNU6-643P-201ENST00000384018 TRIM22Q8IYM9 498 aa4.5□□□□□ -1.69
RNU6-643P-201ENST00000384018 RSPH6AQ9H0K4 717 aa4.5□□□□□ -1.69
RNU6-643P-201ENST00000384018 ESPNB1AK53 854 aa4.49□□□□□ -1.69
RNU6-643P-201ENST00000384018 PODNQ7Z5L7 613 aa4.49□□□□□ -1.69
RNU6-643P-201ENST00000384018 EPS8L1Q8TE68 723 aa4.49□□□□□ -1.69
RNU6-643P-201ENST00000384018 BCRP11274 1271 aa4.48□□□□□ -1.69
RNU6-643P-201ENST00000384018 RNF144AP50876 292 aaPredicted RBP4.48□□□□□ -1.69
RNU6-643P-201ENST00000384018 DBN1Q16643 649 aa4.48□□□□□ -1.69
RNU6-643P-201ENST00000384018 DZIP3Q86Y13 1208 aaKnown RBP4.48□□□□□ -1.69
RNU6-643P-201ENST00000384018 GALNT6Q8NCL4 622 aa4.48□□□□□ -1.69
RNU6-643P-201ENST00000384018 NEDD1Q8NHV4 660 aa4.48□□□□□ -1.69
RNU6-643P-201ENST00000384018 ACDQ96AP0 544 aa4.48□□□□□ -1.69
RNU6-643P-201ENST00000384018 GMCL1Q96IK5 515 aa4.48□□□□□ -1.69
RNU6-643P-201ENST00000384018 CYLDQ9NQC7 956 aa4.48□□□□□ -1.69
RNU6-643P-201ENST00000384018 RIPOR1Q6ZS17 1223 aa4.47□□□□□ -1.69
RNU6-643P-201ENST00000384018 BEND7Q8N7W2 519 aaPredicted RBP4.47□□□□□ -1.69
RNU6-643P-201ENST00000384018 GTPBP3Q969Y2 492 aaKnown RBP4.47□□□□□ -1.69
RNU6-643P-201ENST00000384018 SLC24A3Q9HC58 644 aa4.47□□□□□ -1.69
RNU6-643P-201ENST00000384018 HMX1Q9NP08 348 aaPredicted RBP4.47□□□□□ -1.69
RNU6-643P-201ENST00000384018 ATP5J2-PTCD1G3V325 749 aa4.46□□□□□ -1.7
RNU6-643P-201ENST00000384018 AP1G2O75843 785 aa4.46□□□□□ -1.7
RNU6-643P-201ENST00000384018 GPC1P35052 558 aa4.46□□□□□ -1.7
RNU6-643P-201ENST00000384018 PPP2R2DQ66LE6 453 aa4.46□□□□□ -1.7
RNU6-643P-201ENST00000384018 FOXR1Q6PIV2 292 aa4.46□□□□□ -1.7
RNU6-643P-201ENST00000384018 SEPT12Q8IYM1 358 aa4.46□□□□□ -1.7
RNU6-643P-201ENST00000384018 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.46□□□□□ -1.7
RNU6-643P-201ENST00000384018 DYRK1BQ9Y463 629 aa4.46□□□□□ -1.7
RNU6-643P-201ENST00000384018 H7C1W4 665 aa4.45□□□□□ -1.7
RNU6-643P-201ENST00000384018 K7ELQ4 463 aaPredicted RBP4.45□□□□□ -1.7
RNU6-643P-201ENST00000384018 MEN1O00255 615 aa4.45□□□□□ -1.7
RNU6-643P-201ENST00000384018 SKIV2LQ15477 1246 aaKnown RBP4.45□□□□□ -1.7
RNU6-643P-201ENST00000384018 SH3D19Q5HYK7 790 aa4.45□□□□□ -1.7
RNU6-643P-201ENST00000384018 PROCA1Q8NCQ7 364 aaPredicted RBP4.45□□□□□ -1.7
RNU6-643P-201ENST00000384018 TRERF1Q96PN7 1200 aa4.45□□□□□ -1.7
RNU6-643P-201ENST00000384018 LRRC4BQ9NT99 713 aa4.45□□□□□ -1.7
RNU6-643P-201ENST00000384018 OIP5O43482 229 aa4.44□□□□□ -1.7
RNU6-643P-201ENST00000384018 USP17L8P0C7I0 530 aa4.44□□□□□ -1.7
RNU6-643P-201ENST00000384018 MX2P20592 715 aa4.44□□□□□ -1.7
RNU6-643P-201ENST00000384018 SNRPNP63162 240 aaKnown RBP4.44□□□□□ -1.7
RNU6-643P-201ENST00000384018 PNMA1Q8ND90 353 aa4.44□□□□□ -1.7
RNU6-643P-201ENST00000384018 GAS2L1Q99501 681 aaPredicted RBP4.44□□□□□ -1.7
RNU6-643P-201ENST00000384018 KRTAP4-8Q9BYQ9 185 aa4.44□□□□□ -1.7
RNU6-643P-201ENST00000384018 A0A1W2PRU2 124 aa4.43□□□□□ -1.7
RNU6-643P-201ENST00000384018 KRBA1A5PL33 1030 aa4.43□□□□□ -1.7
RNU6-643P-201ENST00000384018 BAG6P46379 1132 aa4.43□□□□□ -1.7
RNU6-643P-201ENST00000384018 POU4F2Q12837 409 aa4.43□□□□□ -1.7
RNU6-643P-201ENST00000384018 NBPF10Q6P3W6 841 aaKnown RBP4.43□□□□□ -1.7
RNU6-643P-201ENST00000384018 NBPF15Q8N660 670 aa4.43□□□□□ -1.7
RNU6-643P-201ENST00000384018 NSFL1CQ9UNZ2 370 aaKnown RBP4.43□□□□□ -1.7
RNU6-643P-201ENST00000384018 SHISA8B8ZZ34 492 aa4.42□□□□□ -1.7
RNU6-643P-201ENST00000384018 THBS1P07996 1170 aa4.42□□□□□ -1.7
RNU6-643P-201ENST00000384018 ERVK-9P63128 1117 aa4.42□□□□□ -1.7
RNU6-643P-201ENST00000384018 SLC27A3Q5K4L6 730 aa4.42□□□□□ -1.7
RNU6-643P-201ENST00000384018 Q8N3U1 123 aa4.42□□□□□ -1.7
RNU6-643P-201ENST00000384018 OXCT2Q9BYC2 517 aaPredicted RBP4.42□□□□□ -1.7
RNU6-643P-201ENST00000384018 GRIP2Q9C0E4 1043 aa4.42□□□□□ -1.7
RNU6-643P-201ENST00000384018 NUCKS1Q9H1E3 243 aaKnown RBP4.42□□□□□ -1.7
RNU6-643P-201ENST00000384018 SPATA31C2B4DYI2 1134 aa4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 WASLO00401 505 aaPredicted RBP4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 GIGYF1O75420 1035 aaPredicted RBP4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 COL8A1P27658 744 aa4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 MAP2K3P46734 347 aa4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 CLN3Q13286 438 aa4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 CC2D2BQ6DHV5 1058 aa4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 C1orf229Q6ZS94 237 aaPredicted RBP4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 TRIM52Q96A61 297 aa4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 NLRP3Q96P20 1036 aa4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 TRIM34Q9BYJ4 488 aa4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 MKL2Q9ULH7 1088 aa4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 PCDHB9Q9Y5E1 797 aa4.41□□□□□ -1.7
RNU6-643P-201ENST00000384018 FURINP09958 794 aa4.4□□□□□ -1.71
RNU6-643P-201ENST00000384018 SCTRP47872 440 aa4.4□□□□□ -1.71
RNU6-643P-201ENST00000384018 TAS1R3Q7RTX0 852 aa4.4□□□□□ -1.71
RNU6-643P-201ENST00000384018 CYP2U1Q7Z449 544 aa4.4□□□□□ -1.71
RNU6-643P-201ENST00000384018 TIMMDC1Q9NPL8 285 aa4.4□□□□□ -1.71
RNU6-643P-201ENST00000384018 ATP1B4Q9UN42 357 aaPredicted RBP4.4□□□□□ -1.71
RNU6-643P-201ENST00000384018 ZBBXA8MT70 800 aa4.39□□□□□ -1.71
RNU6-643P-201ENST00000384018 F11P03951 625 aa4.39□□□□□ -1.71
RNU6-643P-201ENST00000384018 FBXO45P0C2W1 286 aa4.39□□□□□ -1.71
RNU6-643P-201ENST00000384018 WDR44Q5JSH3 913 aa4.39□□□□□ -1.71
RNU6-643P-201ENST00000384018 ALYREFQ86V81 257 aaKnown RBP4.39□□□□□ -1.71
RNU6-643P-201ENST00000384018 CFHR5Q9BXR6 569 aa4.39□□□□□ -1.71
RNU6-643P-201ENST00000384018 FAM117AQ9C073 453 aa4.39□□□□□ -1.71
RNU6-643P-201ENST00000384018 GPBP1L1Q9HC44 474 aaPredicted RBP4.39□□□□□ -1.71
RNU6-643P-201ENST00000384018 ARHGEF10LQ9HCE6 1279 aa4.39□□□□□ -1.71
RNU6-643P-201ENST00000384018 GPAMQ9HCL2 828 aa4.39□□□□□ -1.71
RNU6-643P-201ENST00000384018 TRAK2O60296 914 aa4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 HOXB4P17483 251 aaPredicted RBP4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 RFC5P40937 340 aa4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 GRIN2CQ14957 1233 aa4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 KLRG1Q96E93 195 aa4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 DDRGK1Q96HY6 314 aa4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 KDM4CQ9H3R0 1056 aa4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 OSBPL3Q9H4L5 887 aa4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 RRAGCQ9HB90 399 aa4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 RAB6BQ9NRW1 208 aa4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 GDF2Q9UK05 429 aaPredicted RBP4.38□□□□□ -1.71
RNU6-643P-201ENST00000384018 UBAP2LQ14157 1087 aaKnown RBP4.37□□□□□ -1.71
RNU6-643P-201ENST00000384018 CCDC125Q86Z20 511 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms