RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 KCNQ2O43526 872 aa15.93■□□□□ 0.14
APOBEC3F-202ENST00000381565 SPON1Q9HCB6 807 aa15.93■□□□□ 0.14
APOBEC3F-202ENST00000381565 WASHC2AQ641Q2 1341 aa15.93■□□□□ 0.14
APOBEC3F-202ENST00000381565 UTRNP46939 3433 aa15.92■□□□□ 0.14
APOBEC3F-202ENST00000381565 NSD2O96028 1365 aa15.92■□□□□ 0.14
APOBEC3F-202ENST00000381565 FLT4P35916 1363 aa15.92■□□□□ 0.14
APOBEC3F-202ENST00000381565 KIF24Q5T7B8 1368 aa15.92■□□□□ 0.14
APOBEC3F-202ENST00000381565 PKD1L3Q7Z443 1732 aa15.92■□□□□ 0.14
APOBEC3F-202ENST00000381565 YY1P25490 414 aa15.92■□□□□ 0.14
APOBEC3F-202ENST00000381565 PDGFDQ9GZP0 370 aaPredicted RBP15.92■□□□□ 0.14
APOBEC3F-202ENST00000381565 SMG6Q86US8 1419 aaKnown RBP15.92■□□□□ 0.14
APOBEC3F-202ENST00000381565 INSRP06213 1382 aa15.91■□□□□ 0.14
APOBEC3F-202ENST00000381565 PLSCR1O15162 318 aa15.91■□□□□ 0.14
APOBEC3F-202ENST00000381565 PROM2Q8N271 834 aa15.91■□□□□ 0.14
APOBEC3F-202ENST00000381565 SPINK5Q9NQ38 1064 aaPredicted RBP15.91■□□□□ 0.14
APOBEC3F-202ENST00000381565 EMILIN1Q9Y6C2 1016 aa15.91■□□□□ 0.14
APOBEC3F-202ENST00000381565 BCL9O00512 1426 aa15.91■□□□□ 0.14
APOBEC3F-202ENST00000381565 DOT1LQ8TEK3 1739 aa15.91■□□□□ 0.14
APOBEC3F-202ENST00000381565 MEGF6O75095 1541 aa15.9■□□□□ 0.14
APOBEC3F-202ENST00000381565 AMPHP49418 695 aa15.9■□□□□ 0.14
APOBEC3F-202ENST00000381565 MARCH10Q8NA82 808 aaPredicted RBP15.9■□□□□ 0.14
APOBEC3F-202ENST00000381565 LTV1Q96GA3 475 aaPredicted RBP15.9■□□□□ 0.14
APOBEC3F-202ENST00000381565 NLRP2Q9NX02 1062 aa15.9■□□□□ 0.14
APOBEC3F-202ENST00000381565 NCAPD2Q15021 1401 aa15.89■□□□□ 0.13
APOBEC3F-202ENST00000381565 DDB1Q16531 1140 aa15.89■□□□□ 0.13
APOBEC3F-202ENST00000381565 CDCA7Q9BWT1 371 aaPredicted RBP15.89■□□□□ 0.13
APOBEC3F-202ENST00000381565 BCL11BQ9C0K0 894 aaPredicted RBP15.89■□□□□ 0.13
APOBEC3F-202ENST00000381565 BTAF1O14981 1849 aa15.89■□□□□ 0.13
APOBEC3F-202ENST00000381565 KAT6BQ8WYB5 2073 aa15.88■□□□□ 0.13
APOBEC3F-202ENST00000381565 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
APOBEC3F-202ENST00000381565 PPP1R1BQ9UD71 204 aaPredicted RBP15.88■□□□□ 0.13
APOBEC3F-202ENST00000381565 PER1O15534 1290 aaPredicted RBP15.86■□□□□ 0.13
APOBEC3F-202ENST00000381565 PTGER2P43116 358 aa15.86■□□□□ 0.13
APOBEC3F-202ENST00000381565 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
APOBEC3F-202ENST00000381565 POLKQ9UBT6 870 aa15.86■□□□□ 0.13
APOBEC3F-202ENST00000381565 TOGARAM1Q9Y4F4 1720 aa15.85■□□□□ 0.13
APOBEC3F-202ENST00000381565 IL2RBP14784 551 aa15.85■□□□□ 0.13
APOBEC3F-202ENST00000381565 TNNT2P45379 298 aaPredicted RBP15.84■□□□□ 0.13
APOBEC3F-202ENST00000381565 NBPF6Q5VWK0 638 aa15.84■□□□□ 0.13
APOBEC3F-202ENST00000381565 NBPF4Q96M43 638 aa15.84■□□□□ 0.13
APOBEC3F-202ENST00000381565 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
APOBEC3F-202ENST00000381565 ITGB4P16144 1822 aa15.83■□□□□ 0.12
APOBEC3F-202ENST00000381565 ZBTB7AO95365 584 aa15.83■□□□□ 0.12
APOBEC3F-202ENST00000381565 USHBP1Q8N6Y0 703 aa15.83■□□□□ 0.12
APOBEC3F-202ENST00000381565 PAPPAQ13219 1627 aa15.82■□□□□ 0.12
APOBEC3F-202ENST00000381565 VIRMAQ69YN4 1812 aaKnown RBP15.82■□□□□ 0.12
APOBEC3F-202ENST00000381565 EXOC5O00471 708 aa15.81■□□□□ 0.12
APOBEC3F-202ENST00000381565 TXNRD1Q16881 649 aa15.81■□□□□ 0.12
APOBEC3F-202ENST00000381565 NPC1L1Q9UHC9 1359 aa15.8■□□□□ 0.12
APOBEC3F-202ENST00000381565 PPM1GO15355 546 aaPredicted RBP15.8■□□□□ 0.12
APOBEC3F-202ENST00000381565 SGIP1Q9BQI5 828 aa15.8■□□□□ 0.12
APOBEC3F-202ENST00000381565 LY75O60449 1722 aa15.8■□□□□ 0.12
APOBEC3F-202ENST00000381565 MORC1Q86VD1 984 aa15.79■□□□□ 0.12
APOBEC3F-202ENST00000381565 SLC15A2Q16348 729 aa15.78■□□□□ 0.12
APOBEC3F-202ENST00000381565 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.12
APOBEC3F-202ENST00000381565 STK32BQ9NY57 414 aa15.77■□□□□ 0.12
APOBEC3F-202ENST00000381565 COL3A1P02461 1466 aaPredicted RBP15.77■□□□□ 0.11
APOBEC3F-202ENST00000381565 CC2D1BQ5T0F9 858 aaKnown RBP15.76■□□□□ 0.11
APOBEC3F-202ENST00000381565 EYA1Q99502 592 aa15.76■□□□□ 0.11
APOBEC3F-202ENST00000381565 FHDC1Q9C0D6 1143 aaPredicted RBP15.76■□□□□ 0.11
APOBEC3F-202ENST00000381565 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
APOBEC3F-202ENST00000381565 TUBGCP6Q96RT7 1819 aa15.75■□□□□ 0.11
APOBEC3F-202ENST00000381565 IGSF1Q8N6C5 1336 aa15.74■□□□□ 0.11
APOBEC3F-202ENST00000381565 ZNF784Q8NCA9 323 aaPredicted RBP15.74■□□□□ 0.11
APOBEC3F-202ENST00000381565 SYT17Q9BSW7 474 aa15.74■□□□□ 0.11
APOBEC3F-202ENST00000381565 MTFR1LQ9H019 292 aa15.74■□□□□ 0.11
APOBEC3F-202ENST00000381565 CAPN15O75808 1086 aa15.73■□□□□ 0.11
APOBEC3F-202ENST00000381565 ZCRB1Q8TBF4 217 aaKnown RBP15.73■□□□□ 0.11
APOBEC3F-202ENST00000381565 RAPGEF4Q8WZA2 1011 aa15.73■□□□□ 0.11
APOBEC3F-202ENST00000381565 ACSBG1Q96GR2 724 aa15.73■□□□□ 0.11
APOBEC3F-202ENST00000381565 TAF1LQ8IZX4 1826 aa15.73■□□□□ 0.11
APOBEC3F-202ENST00000381565 GOLGB1Q14789 3259 aaKnown RBP15.72■□□□□ 0.11
APOBEC3F-202ENST00000381565 TATP17735 454 aaPredicted RBP15.72■□□□□ 0.11
APOBEC3F-202ENST00000381565 ZNF827Q17R98 1081 aa15.72■□□□□ 0.11
APOBEC3F-202ENST00000381565 DDX54Q8TDD1 881 aaKnown RBP15.72■□□□□ 0.11
APOBEC3F-202ENST00000381565 SCN11AQ9UI33 1791 aa15.71■□□□□ 0.11
APOBEC3F-202ENST00000381565 MAP3K5Q99683 1374 aa15.71■□□□□ 0.11
APOBEC3F-202ENST00000381565 PLEKHG2Q9H7P9 1386 aa15.71■□□□□ 0.11
APOBEC3F-202ENST00000381565 QSER1Q2KHR3 1735 aa15.71■□□□□ 0.1
APOBEC3F-202ENST00000381565 PCDH11XQ9BZA7 1347 aa15.7■□□□□ 0.1
APOBEC3F-202ENST00000381565 PCDH11YQ9BZA8 1340 aa15.7■□□□□ 0.1
APOBEC3F-202ENST00000381565 LRRC4BQ9NT99 713 aa15.7■□□□□ 0.1
APOBEC3F-202ENST00000381565 KDRP35968 1356 aa15.7■□□□□ 0.1
APOBEC3F-202ENST00000381565 CYP27B1O15528 508 aa15.69■□□□□ 0.1
APOBEC3F-202ENST00000381565 IL13P35225 146 aa15.69■□□□□ 0.1
APOBEC3F-202ENST00000381565 MTHFSP49914 203 aa15.69■□□□□ 0.1
APOBEC3F-202ENST00000381565 C5P01031 1676 aa15.69■□□□□ 0.1
APOBEC3F-202ENST00000381565 CACNB1Q02641 598 aaPredicted RBP15.68■□□□□ 0.1
APOBEC3F-202ENST00000381565 CNGB1Q14028 1251 aaPredicted RBP15.68■□□□□ 0.1
APOBEC3F-202ENST00000381565 AEBP1Q8IUX7 1158 aa15.68■□□□□ 0.1
APOBEC3F-202ENST00000381565 COL24A1Q17RW2 1714 aa15.68■□□□□ 0.1
APOBEC3F-202ENST00000381565 ADAMTS7Q9UKP4 1686 aa15.67■□□□□ 0.1
APOBEC3F-202ENST00000381565 ARXQ96QS3 562 aa15.67■□□□□ 0.1
APOBEC3F-202ENST00000381565 AKT1S1Q96B36 256 aa15.66■□□□□ 0.1
APOBEC3F-202ENST00000381565 CHD4Q14839 1912 aa15.65■□□□□ 0.1
APOBEC3F-202ENST00000381565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.65■□□□□ 0.1
APOBEC3F-202ENST00000381565 PRIM1P49642 420 aaKnown RBP15.64■□□□□ 0.09
APOBEC3F-202ENST00000381565 KDM6AO15550 1401 aaPredicted RBP15.63■□□□□ 0.09
APOBEC3F-202ENST00000381565 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
APOBEC3F-202ENST00000381565 PNPLA7Q6ZV29 1317 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms