RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 TOM1L2Q6ZVM7 507 aa12.68□□□□□ -0.38
HMGN1-202ENST00000380747 CCDC7Q96M83 1385 aa12.68□□□□□ -0.38
HMGN1-202ENST00000380747 MAP3K19Q56UN5 1328 aa12.67□□□□□ -0.38
HMGN1-202ENST00000380747 WDR17Q8IZU2 1322 aa12.67□□□□□ -0.38
HMGN1-202ENST00000380747 RGPD3A6NKT7 1758 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-202ENST00000380747 COL18A1P39060 1754 aa12.67□□□□□ -0.38
HMGN1-202ENST00000380747 RGPD4Q7Z3J3 1758 aa12.67□□□□□ -0.38
HMGN1-202ENST00000380747 PRR29P0C7W0 189 aa12.67□□□□□ -0.38
HMGN1-202ENST00000380747 AMPHP49418 695 aa12.67□□□□□ -0.38
HMGN1-202ENST00000380747 CRB1P82279 1406 aa12.67□□□□□ -0.38
HMGN1-202ENST00000380747 KIF20BQ96Q89 1820 aa12.67□□□□□ -0.38
HMGN1-202ENST00000380747 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
HMGN1-202ENST00000380747 PARP4Q9UKK3 1724 aaKnown RBP12.66□□□□□ -0.38
HMGN1-202ENST00000380747 PLSCR1O15162 318 aa12.66□□□□□ -0.38
HMGN1-202ENST00000380747 RRS1Q15050 365 aaKnown RBP12.66□□□□□ -0.38
HMGN1-202ENST00000380747 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-202ENST00000380747 PPP1R1BQ9UD71 204 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-202ENST00000380747 KNSTRNQ9Y448 316 aa12.66□□□□□ -0.38
HMGN1-202ENST00000380747 OVOS2A0A0G2JMS6 1433 aa12.65□□□□□ -0.38
HMGN1-202ENST00000380747 ANKRD24Q8TF21 1146 aa12.65□□□□□ -0.38
HMGN1-202ENST00000380747 IP6K1Q92551 441 aa12.65□□□□□ -0.38
HMGN1-202ENST00000380747 ABCC6O95255 1503 aa12.65□□□□□ -0.38
HMGN1-202ENST00000380747 LTN1O94822 1766 aa12.64□□□□□ -0.39
HMGN1-202ENST00000380747 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-202ENST00000380747 NLRP2Q9NX02 1062 aa12.64□□□□□ -0.39
HMGN1-202ENST00000380747 PEAK1Q9H792 1746 aa12.64□□□□□ -0.39
HMGN1-202ENST00000380747 ERBB3P21860 1342 aa12.63□□□□□ -0.39
HMGN1-202ENST00000380747 BCL9O00512 1426 aa12.63□□□□□ -0.39
HMGN1-202ENST00000380747 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-202ENST00000380747 HOXC9P31274 260 aa12.63□□□□□ -0.39
HMGN1-202ENST00000380747 ZEB1P37275 1124 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-202ENST00000380747 CARD10Q9BWT7 1032 aa12.63□□□□□ -0.39
HMGN1-202ENST00000380747 RGPD5Q99666 1765 aa12.62□□□□□ -0.39
HMGN1-202ENST00000380747 PITPNM1O00562 1244 aa12.62□□□□□ -0.39
HMGN1-202ENST00000380747 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-202ENST00000380747 RTL1A6NKG5 1358 aa12.61□□□□□ -0.39
HMGN1-202ENST00000380747 NSD2O96028 1365 aa12.61□□□□□ -0.39
HMGN1-202ENST00000380747 CNGB1Q14028 1251 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-202ENST00000380747 MORC1Q86VD1 984 aa12.61□□□□□ -0.39
HMGN1-202ENST00000380747 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-202ENST00000380747 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
HMGN1-202ENST00000380747 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
HMGN1-202ENST00000380747 CASZ1Q86V15 1759 aa12.61□□□□□ -0.39
HMGN1-202ENST00000380747 ANO8Q9HCE9 1232 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-202ENST00000380747 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-202ENST00000380747 FLT4P35916 1363 aa12.59□□□□□ -0.39
HMGN1-202ENST00000380747 HSP90AB2PQ58FF8 381 aa12.59□□□□□ -0.39
HMGN1-202ENST00000380747 CDCA7Q9BWT1 371 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-202ENST00000380747 SMG6Q86US8 1419 aaKnown RBP12.59□□□□□ -0.39
HMGN1-202ENST00000380747 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
HMGN1-202ENST00000380747 GOLGB1Q14789 3259 aaKnown RBP12.58□□□□□ -0.4
HMGN1-202ENST00000380747 DDB1Q16531 1140 aa12.58□□□□□ -0.4
HMGN1-202ENST00000380747 CC2D1BQ5T0F9 858 aaKnown RBP12.58□□□□□ -0.4
HMGN1-202ENST00000380747 POLKQ9UBT6 870 aa12.58□□□□□ -0.4
HMGN1-202ENST00000380747 ANKRD26Q9UPS8 1709 aa12.58□□□□□ -0.4
HMGN1-202ENST00000380747 INSRP06213 1382 aa12.57□□□□□ -0.4
HMGN1-202ENST00000380747 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
HMGN1-202ENST00000380747 PER1O15534 1290 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-202ENST00000380747 PTGER2P43116 358 aa12.57□□□□□ -0.4
HMGN1-202ENST00000380747 SBF2Q86WG5 1849 aa12.57□□□□□ -0.4
HMGN1-202ENST00000380747 CEP350Q5VT06 3117 aa12.57□□□□□ -0.4
HMGN1-202ENST00000380747 IL2RBP14784 551 aa12.56□□□□□ -0.4
HMGN1-202ENST00000380747 ZNF784Q8NCA9 323 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-202ENST00000380747 EXOC5O00471 708 aa12.55□□□□□ -0.4
HMGN1-202ENST00000380747 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
HMGN1-202ENST00000380747 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
HMGN1-202ENST00000380747 MARCH10Q8NA82 808 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-202ENST00000380747 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
HMGN1-202ENST00000380747 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
HMGN1-202ENST00000380747 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
HMGN1-202ENST00000380747 ZBTB7AO95365 584 aa12.53□□□□□ -0.4
HMGN1-202ENST00000380747 PTF1AQ7RTS3 328 aa12.53□□□□□ -0.4
HMGN1-202ENST00000380747 SGIP1Q9BQI5 828 aa12.53□□□□□ -0.4
HMGN1-202ENST00000380747 PDGFDQ9GZP0 370 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-202ENST00000380747 MAP3K5Q99683 1374 aa12.53□□□□□ -0.4
HMGN1-202ENST00000380747 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-202ENST00000380747 NUBP1P53384 320 aa12.52□□□□□ -0.41
HMGN1-202ENST00000380747 SLC15A2Q16348 729 aa12.52□□□□□ -0.41
HMGN1-202ENST00000380747 TXNRD1Q16881 649 aa12.52□□□□□ -0.41
HMGN1-202ENST00000380747 SYT17Q9BSW7 474 aa12.52□□□□□ -0.41
HMGN1-202ENST00000380747 MTFR1LQ9H019 292 aa12.52□□□□□ -0.41
HMGN1-202ENST00000380747 STK32BQ9NY57 414 aa12.52□□□□□ -0.41
HMGN1-202ENST00000380747 MAP2P11137 1827 aaKnown RBP12.52□□□□□ -0.41
HMGN1-202ENST00000380747 NPC1L1Q9UHC9 1359 aa12.52□□□□□ -0.41
HMGN1-202ENST00000380747 TNS2Q63HR2 1409 aa12.52□□□□□ -0.41
HMGN1-202ENST00000380747 RGL2O15211 777 aa12.51□□□□□ -0.41
HMGN1-202ENST00000380747 EIF4A2Q14240 407 aaKnown RBP12.51□□□□□ -0.41
HMGN1-202ENST00000380747 RAPGEF4Q8WZA2 1011 aa12.51□□□□□ -0.41
HMGN1-202ENST00000380747 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-202ENST00000380747 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-202ENST00000380747 MTHFSP49914 203 aa12.5□□□□□ -0.41
HMGN1-202ENST00000380747 POTEHQ6S545 545 aa12.5□□□□□ -0.41
HMGN1-202ENST00000380747 DDX54Q8TDD1 881 aaKnown RBP12.5□□□□□ -0.41
HMGN1-202ENST00000380747 EYA1Q99502 592 aa12.5□□□□□ -0.41
HMGN1-202ENST00000380747 RGPD2P0DJD1 1756 aa12.5□□□□□ -0.41
HMGN1-202ENST00000380747 MEGF6O75095 1541 aa12.49□□□□□ -0.41
HMGN1-202ENST00000380747 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
HMGN1-202ENST00000380747 ZCRB1Q8TBF4 217 aaKnown RBP12.49□□□□□ -0.41
HMGN1-202ENST00000380747 C1QTNF8P60827 252 aa12.47□□□□□ -0.41
HMGN1-202ENST00000380747 CHD4Q14839 1912 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms