RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 BRWD3Q6RI45 1802 aa25.03■■□□□ 1.6
SMN2-202ENST00000380742 RXRBP28702 533 aa25.03■■□□□ 1.6
SMN2-202ENST00000380742 OVOS2A0A0G2JMS6 1433 aa25.02■■□□□ 1.6
SMN2-202ENST00000380742 TATP17735 454 aaPredicted RBP25.02■■□□□ 1.6
SMN2-202ENST00000380742 PRKAR2BP31323 418 aa25.02■■□□□ 1.6
SMN2-202ENST00000380742 FAM9BQ8IZU0 186 aa25.01■■□□□ 1.59
SMN2-202ENST00000380742 CDCA7Q9BWT1 371 aaPredicted RBP25.01■■□□□ 1.59
SMN2-202ENST00000380742 PLEKHF1Q96S99 279 aa25■■□□□ 1.59
SMN2-202ENST00000380742 PHACTR3Q96KR7 559 aa24.98■■□□□ 1.59
SMN2-202ENST00000380742 CCDC146Q8IYE0 955 aa24.97■■□□□ 1.59
SMN2-202ENST00000380742 SEPT12Q8IYM1 358 aa24.97■■□□□ 1.59
SMN2-202ENST00000380742 DLG5Q8TDM6 1919 aa24.97■■□□□ 1.59
SMN2-202ENST00000380742 A0A0G2JS52 829 aa24.96■■□□□ 1.59
SMN2-202ENST00000380742 MYT1Q01538 1121 aa24.96■■□□□ 1.59
SMN2-202ENST00000380742 PLEKHG2Q9H7P9 1386 aa24.96■■□□□ 1.59
SMN2-202ENST00000380742 TNS2Q63HR2 1409 aa24.96■■□□□ 1.59
SMN2-202ENST00000380742 PNNQ9H307 717 aaKnown RBP24.95■■□□□ 1.59
SMN2-202ENST00000380742 RGS12O14924 1447 aa24.95■■□□□ 1.58
SMN2-202ENST00000380742 EXOC5O00471 708 aa24.94■■□□□ 1.58
SMN2-202ENST00000380742 DDB1Q16531 1140 aa24.94■■□□□ 1.58
SMN2-202ENST00000380742 ZCRB1Q8TBF4 217 aaKnown RBP24.94■■□□□ 1.58
SMN2-202ENST00000380742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.94■■□□□ 1.58
SMN2-202ENST00000380742 VIRMAQ69YN4 1812 aaKnown RBP24.94■■□□□ 1.58
SMN2-202ENST00000380742 PLEKHO1Q53GL0 409 aaPredicted RBP24.93■■□□□ 1.58
SMN2-202ENST00000380742 RUNDC1Q96C34 613 aa24.93■■□□□ 1.58
SMN2-202ENST00000380742 MTHFSDQ2M296 383 aaKnown RBP24.93■■□□□ 1.58
SMN2-202ENST00000380742 AMOTQ4VCS5 1084 aa24.93■■□□□ 1.58
SMN2-202ENST00000380742 SPG7Q9UQ90 795 aa24.93■■□□□ 1.58
SMN2-202ENST00000380742 MAPK8IP3Q9UPT6 1336 aa24.9■■□□□ 1.58
SMN2-202ENST00000380742 CYP27B1O15528 508 aa24.89■■□□□ 1.57
SMN2-202ENST00000380742 NEFMP07197 916 aa24.89■■□□□ 1.57
SMN2-202ENST00000380742 ZNF530Q6P9A1 599 aaPredicted RBP24.89■■□□□ 1.57
SMN2-202ENST00000380742 DDX54Q8TDD1 881 aaKnown RBP24.89■■□□□ 1.57
SMN2-202ENST00000380742 PCDH11XQ9BZA7 1347 aa24.89■■□□□ 1.57
SMN2-202ENST00000380742 PCDH11YQ9BZA8 1340 aa24.89■■□□□ 1.57
SMN2-202ENST00000380742 PDE3BQ13370 1112 aa24.87■■□□□ 1.57
SMN2-202ENST00000380742 MARCH10Q8NA82 808 aaPredicted RBP24.87■■□□□ 1.57
SMN2-202ENST00000380742 GAS2L2Q8NHY3 880 aa24.87■■□□□ 1.57
SMN2-202ENST00000380742 PHKG2P15735 406 aa24.86■■□□□ 1.57
SMN2-202ENST00000380742 SCN11AQ9UI33 1791 aa24.85■■□□□ 1.57
SMN2-202ENST00000380742 APAF1O14727 1248 aa24.85■■□□□ 1.57
SMN2-202ENST00000380742 NFE2L2Q16236 605 aa24.85■■□□□ 1.57
SMN2-202ENST00000380742 IFNL2Q8IZJ0 200 aa24.85■■□□□ 1.57
SMN2-202ENST00000380742 TMPOP42166 694 aaKnown RBP24.84■■□□□ 1.57
SMN2-202ENST00000380742 KRT27Q7Z3Y8 459 aa24.84■■□□□ 1.57
SMN2-202ENST00000380742 SENP3-EIF4A1A0A087X0R7 540 aa24.83■■□□□ 1.57
SMN2-202ENST00000380742 AKAP4Q5JQC9 854 aa24.83■■□□□ 1.57
SMN2-202ENST00000380742 FAM182BQ5T319 152 aa24.83■■□□□ 1.57
SMN2-202ENST00000380742 RRP7AQ9Y3A4 280 aaKnown RBP24.83■■□□□ 1.57
SMN2-202ENST00000380742 TOGARAM1Q9Y4F4 1720 aa24.83■■□□□ 1.57
SMN2-202ENST00000380742 SBF2Q86WG5 1849 aa24.83■■□□□ 1.57
SMN2-202ENST00000380742 ADAMTS7Q9UKP4 1686 aa24.82■■□□□ 1.56
SMN2-202ENST00000380742 C1orf141Q5JVX7 400 aa24.82■■□□□ 1.56
SMN2-202ENST00000380742 DOT1LQ8TEK3 1739 aa24.82■■□□□ 1.56
SMN2-202ENST00000380742 KAT6BQ8WYB5 2073 aa24.81■■□□□ 1.56
SMN2-202ENST00000380742 MAP3K5Q99683 1374 aa24.81■■□□□ 1.56
SMN2-202ENST00000380742 NKX1-1Q15270 411 aaPredicted RBP24.8■■□□□ 1.56
SMN2-202ENST00000380742 NEUROD2Q15784 382 aa24.8■■□□□ 1.56
SMN2-202ENST00000380742 ITGB4P16144 1822 aa24.8■■□□□ 1.56
SMN2-202ENST00000380742 GNAT3A8MTJ3 354 aa24.8■■□□□ 1.56
SMN2-202ENST00000380742 RIPK4P57078 832 aa24.8■■□□□ 1.56
SMN2-202ENST00000380742 KDM6AO15550 1401 aaPredicted RBP24.79■■□□□ 1.56
SMN2-202ENST00000380742 MPRIPQ6WCQ1 1025 aa24.79■■□□□ 1.56
SMN2-202ENST00000380742 EP400Q96L91 3159 aa24.77■■□□□ 1.56
SMN2-202ENST00000380742 HSP90AB1P08238 724 aaKnown RBP24.77■■□□□ 1.56
SMN2-202ENST00000380742 LGR6Q9HBX8 967 aa24.77■■□□□ 1.56
SMN2-202ENST00000380742 TRIM35Q9UPQ4 493 aa24.76■■□□□ 1.55
SMN2-202ENST00000380742 BCL9O00512 1426 aa24.75■■□□□ 1.55
SMN2-202ENST00000380742 IL17REQ8NFR9 667 aa24.75■■□□□ 1.55
SMN2-202ENST00000380742 DCAF5Q96JK2 942 aa24.75■■□□□ 1.55
SMN2-202ENST00000380742 SIPA1L3O60292 1781 aaPredicted RBP24.74■■□□□ 1.55
SMN2-202ENST00000380742 RNMTO43148 476 aaKnown RBP24.74■■□□□ 1.55
SMN2-202ENST00000380742 HTATSF1O43719 755 aaKnown RBP24.74■■□□□ 1.55
SMN2-202ENST00000380742 DCTN1Q14203 1278 aa24.74■■□□□ 1.55
SMN2-202ENST00000380742 NHSQ6T4R5 1651 aa24.73■■□□□ 1.55
SMN2-202ENST00000380742 MCM10Q7L590 875 aa24.73■■□□□ 1.55
SMN2-202ENST00000380742 SALL2Q9Y467 1007 aaPredicted RBP24.73■■□□□ 1.55
SMN2-202ENST00000380742 FAM196AQ6ZSG2 479 aa24.72■■□□□ 1.55
SMN2-202ENST00000380742 RTF1Q92541 710 aaKnown RBP24.72■■□□□ 1.55
SMN2-202ENST00000380742 ACSBG1Q96GR2 724 aa24.71■■□□□ 1.55
SMN2-202ENST00000380742 CEMIPQ8WUJ3 1361 aa24.71■■□□□ 1.55
SMN2-202ENST00000380742 LMOD3Q0VAK6 560 aa24.7■■□□□ 1.55
SMN2-202ENST00000380742 NCBP3Q53F19 620 aaKnown RBP24.7■■□□□ 1.55
SMN2-202ENST00000380742 THUMPD2Q9BTF0 503 aaKnown RBP24.7■■□□□ 1.55
SMN2-202ENST00000380742 MRC1P22897 1456 aa24.7■■□□□ 1.54
SMN2-202ENST00000380742 ERVV-2B6SEH9 535 aa24.68■■□□□ 1.54
SMN2-202ENST00000380742 CCDC27Q2M243 656 aa24.68■■□□□ 1.54
SMN2-202ENST00000380742 BTAF1O14981 1849 aa24.68■■□□□ 1.54
SMN2-202ENST00000380742 KCNQ2O43526 872 aa24.67■■□□□ 1.54
SMN2-202ENST00000380742 PRIM1P49642 420 aaKnown RBP24.67■■□□□ 1.54
SMN2-202ENST00000380742 HNRNPUQ00839 825 aaKnown RBP eCLIP24.67■■□□□ 1.54
SMN2-202ENST00000380742 ILDR2Q71H61 639 aa24.67■■□□□ 1.54
SMN2-202ENST00000380742 WWC1Q8IX03 1113 aa24.67■■□□□ 1.54
SMN2-202ENST00000380742 NGEFQ8N5V2 710 aa24.67■■□□□ 1.54
SMN2-202ENST00000380742 PTF1AQ7RTS3 328 aa24.66■■□□□ 1.54
SMN2-202ENST00000380742 SLC52A2Q9HAB3 445 aa24.66■■□□□ 1.54
SMN2-202ENST00000380742 CABP4P57796 275 aa24.65■■□□□ 1.54
SMN2-202ENST00000380742 NFATC2IPQ8NCF5 419 aa24.65■■□□□ 1.54
SMN2-202ENST00000380742 SYTL4Q96C24 671 aaPredicted RBP24.65■■□□□ 1.54
SMN2-202ENST00000380742 TNS1Q9HBL0 1735 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms