RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 LRRC37A3O60309 1634 aa15.98■□□□□ 0.15
PCNA-201ENST00000379143 EXOC5O00471 708 aa15.98■□□□□ 0.15
PCNA-201ENST00000379143 TATP17735 454 aaPredicted RBP15.98■□□□□ 0.15
PCNA-201ENST00000379143 PDE3BQ13370 1112 aa15.98■□□□□ 0.15
PCNA-201ENST00000379143 KRT27Q7Z3Y8 459 aa15.98■□□□□ 0.15
PCNA-201ENST00000379143 DEFB132Q7Z7B7 95 aa15.97■□□□□ 0.15
PCNA-201ENST00000379143 OVOS2A0A0G2JMS6 1433 aa15.97■□□□□ 0.15
PCNA-201ENST00000379143 TNS2Q63HR2 1409 aa15.97■□□□□ 0.15
PCNA-201ENST00000379143 KDRP35968 1356 aa15.96■□□□□ 0.15
PCNA-201ENST00000379143 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
PCNA-201ENST00000379143 SULT6B1Q6IMI4 303 aa15.95■□□□□ 0.14
PCNA-201ENST00000379143 MEGF6O75095 1541 aa15.95■□□□□ 0.14
PCNA-201ENST00000379143 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
PCNA-201ENST00000379143 CNKSR2Q8WXI2 1034 aa15.94■□□□□ 0.14
PCNA-201ENST00000379143 ZCRB1Q8TBF4 217 aaKnown RBP15.94■□□□□ 0.14
PCNA-201ENST00000379143 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.145e-8■□□□□ 9.8
PCNA-201ENST00000379143 SPG7Q9UQ90 795 aa15.93■□□□□ 0.14
PCNA-201ENST00000379143 PKD1L3Q7Z443 1732 aa15.92■□□□□ 0.14
PCNA-201ENST00000379143 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
PCNA-201ENST00000379143 KCNA4P22459 653 aa15.92■□□□□ 0.14
PCNA-201ENST00000379143 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCNA-201ENST00000379143 AMOTQ4VCS5 1084 aa15.92■□□□□ 0.14
PCNA-201ENST00000379143 FAM196AQ6ZSG2 479 aa15.92■□□□□ 0.14
PCNA-201ENST00000379143 PCDH11XQ9BZA7 1347 aa15.91■□□□□ 0.14
PCNA-201ENST00000379143 PCDH11YQ9BZA8 1340 aa15.91■□□□□ 0.14
PCNA-201ENST00000379143 HMOX1P09601 288 aa15.91■□□□□ 0.14
PCNA-201ENST00000379143 SF3B2Q13435 895 aaKnown RBP15.91■□□□□ 0.14
PCNA-201ENST00000379143 AEBP1Q8IUX7 1158 aa15.91■□□□□ 0.14
PCNA-201ENST00000379143 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
PCNA-201ENST00000379143 MARCH10Q8NA82 808 aaPredicted RBP15.9■□□□□ 0.14
PCNA-201ENST00000379143 DDX54Q8TDD1 881 aaKnown RBP15.9■□□□□ 0.14
PCNA-201ENST00000379143 BCL9O00512 1426 aa15.89■□□□□ 0.13
PCNA-201ENST00000379143 SHANK3Q9BYB0 1731 aa15.89■□□□□ 0.13
PCNA-201ENST00000379143 FCHSD2O94868 740 aa15.89■□□□□ 0.13
PCNA-201ENST00000379143 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
PCNA-201ENST00000379143 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
PCNA-201ENST00000379143 PNNQ9H307 717 aaKnown RBP15.89■□□□□ 0.13
PCNA-201ENST00000379143 WDR43Q15061 677 aaKnown RBP eCLIP15.87■□□□□ 0.13
PCNA-201ENST00000379143 FAM182BQ5T319 152 aa15.87■□□□□ 0.13
PCNA-201ENST00000379143 RSPH6AQ9H0K4 717 aa15.87■□□□□ 0.13
PCNA-201ENST00000379143 NEFMP07197 916 aa15.86■□□□□ 0.13
PCNA-201ENST00000379143 IFNL2Q8IZJ0 200 aa15.86■□□□□ 0.13
PCNA-201ENST00000379143 PSDA5PKW4 1024 aaPredicted RBP15.85■□□□□ 0.13
PCNA-201ENST00000379143 CYP27B1O15528 508 aa15.85■□□□□ 0.13
PCNA-201ENST00000379143 PRKAR2BP31323 418 aa15.85■□□□□ 0.13
PCNA-201ENST00000379143 TNS1Q9HBL0 1735 aaKnown RBP15.85■□□□□ 0.13
PCNA-201ENST00000379143 HSP90AB1P08238 724 aaKnown RBP15.84■□□□□ 0.13
PCNA-201ENST00000379143 PHKG2P15735 406 aa15.84■□□□□ 0.13
PCNA-201ENST00000379143 C1orf141Q5JVX7 400 aa15.84■□□□□ 0.13
PCNA-201ENST00000379143 ZNF530Q6P9A1 599 aaPredicted RBP15.84■□□□□ 0.13
PCNA-201ENST00000379143 MRS2Q9HD23 443 aa15.84■□□□□ 0.13
PCNA-201ENST00000379143 BAG6P46379 1132 aa15.83■□□□□ 0.12
PCNA-201ENST00000379143 NKX1-1Q15270 411 aaPredicted RBP15.83■□□□□ 0.12
PCNA-201ENST00000379143 GAS2L2Q8NHY3 880 aa15.83■□□□□ 0.12
PCNA-201ENST00000379143 SBF2Q86WG5 1849 aa15.83■□□□□ 0.12
PCNA-201ENST00000379143 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
PCNA-201ENST00000379143 MTHFSDQ2M296 383 aaKnown RBP15.81■□□□□ 0.12
PCNA-201ENST00000379143 NHSQ6T4R5 1651 aa15.81■□□□□ 0.12
PCNA-201ENST00000379143 MAPK8IP3Q9UPT6 1336 aa15.81■□□□□ 0.12
PCNA-201ENST00000379143 DOT1LQ8TEK3 1739 aa15.8■□□□□ 0.12
PCNA-201ENST00000379143 TRIM37O94972 964 aa15.8■□□□□ 0.12
PCNA-201ENST00000379143 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
PCNA-201ENST00000379143 PLEKHF1Q96S99 279 aa15.8■□□□□ 0.12
PCNA-201ENST00000379143 BCL11BQ9C0K0 894 aaPredicted RBP15.8■□□□□ 0.12
PCNA-201ENST00000379143 CCDC184Q52MB2 194 aa15.79■□□□□ 0.12
PCNA-201ENST00000379143 PHACTR3Q96KR7 559 aa15.79■□□□□ 0.12
PCNA-201ENST00000379143 ADAMTS8Q9UP79 889 aa15.79■□□□□ 0.12
PCNA-201ENST00000379143 CCER2I3L3R5 266 aa15.78■□□□□ 0.12
PCNA-201ENST00000379143 PNISRQ8TF01 805 aaKnown RBP15.78■□□□□ 0.12
PCNA-201ENST00000379143 ACSBG1Q96GR2 724 aa15.78■□□□□ 0.12
PCNA-201ENST00000379143 GNAT3A8MTJ3 354 aa15.77■□□□□ 0.12
PCNA-201ENST00000379143 EN1Q05925 392 aaPredicted RBP15.77■□□□□ 0.12
PCNA-201ENST00000379143 RUNDC1Q96C34 613 aa15.77■□□□□ 0.12
PCNA-201ENST00000379143 MAP3K5Q99683 1374 aa15.77■□□□□ 0.11
PCNA-201ENST00000379143 ERVV-2B6SEH9 535 aa15.76■□□□□ 0.11
PCNA-201ENST00000379143 PRIM1P49642 420 aaKnown RBP15.76■□□□□ 0.11
PCNA-201ENST00000379143 SYTL4Q96C24 671 aaPredicted RBP15.76■□□□□ 0.11
PCNA-201ENST00000379143 TOGARAM1Q9Y4F4 1720 aa15.76■□□□□ 0.11
PCNA-201ENST00000379143 KCNQ2O43526 872 aa15.75■□□□□ 0.11
PCNA-201ENST00000379143 APBA3O96018 575 aa15.75■□□□□ 0.11
PCNA-201ENST00000379143 MPRIPQ6WCQ1 1025 aa15.75■□□□□ 0.11
PCNA-201ENST00000379143 SCN11AQ9UI33 1791 aa15.75■□□□□ 0.11
PCNA-201ENST00000379143 HTATSF1O43719 755 aaKnown RBP15.74■□□□□ 0.11
PCNA-201ENST00000379143 R3HDM1Q15032 1099 aaKnown RBP15.74■□□□□ 0.11
PCNA-201ENST00000379143 NFE2L2Q16236 605 aa15.74■□□□□ 0.11
PCNA-201ENST00000379143 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
PCNA-201ENST00000379143 RREB1Q92766 1687 aa15.74■□□□□ 0.11
PCNA-201ENST00000379143 ADAMTS7Q9UKP4 1686 aa15.74■□□□□ 0.11
PCNA-201ENST00000379143 RGPD3A6NKT7 1758 aaPredicted RBP15.74■□□□□ 0.11
PCNA-201ENST00000379143 RGPD4Q7Z3J3 1758 aa15.74■□□□□ 0.11
PCNA-201ENST00000379143 KDM6AO15550 1401 aaPredicted RBP15.74■□□□□ 0.11
PCNA-201ENST00000379143 ITGB4P16144 1822 aa15.74■□□□□ 0.11
PCNA-201ENST00000379143 KAT6BQ8WYB5 2073 aa15.73■□□□□ 0.11
PCNA-201ENST00000379143 PLSCR1O15162 318 aa15.73■□□□□ 0.11
PCNA-201ENST00000379143 TMOD3Q9NYL9 352 aa15.73■□□□□ 0.11
PCNA-201ENST00000379143 BTAF1O14981 1849 aa15.73■□□□□ 0.11
PCNA-201ENST00000379143 RNMTO43148 476 aaKnown RBP15.72■□□□□ 0.11
PCNA-201ENST00000379143 CABP4P57796 275 aa15.72■□□□□ 0.11
PCNA-201ENST00000379143 CCDC146Q8IYE0 955 aa15.72■□□□□ 0.11
PCNA-201ENST00000379143 VIRMAQ69YN4 1812 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms