RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 EIF3JO75822 258 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 CCDC83Q8IWF9 413 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 THUMPD2Q9BTF0 503 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 TRMT1Q9NXH9 659 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 PIK3C2GO75747 1445 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 CCDC186Q7Z3E2 898 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 FAM177A1Q8N128 213 aaPredicted RBP10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 IL16Q14005 1332 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 SDSP20132 328 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 ME1P48163 572 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 LMBRD1Q9NUN5 540 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 ZMYM3Q14202 1370 aa10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 GRIN2BQ13224 1484 aa10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 TCOF1Q13428 1488 aaKnown RBP10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 HIP1O00291 1037 aa10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 ERLIN1O75477 346 aa10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 CASTP20810 708 aaKnown RBP10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 SFPQP23246 707 aaKnown RBP eCLIP10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 ASXL1Q8IXJ9 1541 aa10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 SERPINC1P01008 464 aa10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 ZNF165P49910 485 aa10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 CCDC30Q5VVM6 783 aa10.71□□□□□ -0.69
CRNKL1-201ENST00000377327 PRAG1Q86YV5 1406 aa10.71□□□□□ -0.7
CRNKL1-201ENST00000377327 CFAP43Q8NDM7 1665 aa10.71□□□□□ -0.7
CRNKL1-201ENST00000377327 MAP4K4O95819 1239 aaPredicted RBP10.71□□□□□ -0.7
CRNKL1-201ENST00000377327 ARHGAP45Q92619 1136 aa10.71□□□□□ -0.7
CRNKL1-201ENST00000377327 FSD1Q9BTV5 496 aa10.71□□□□□ -0.7
CRNKL1-201ENST00000377327 DDX19AQ9NUU7 478 aaKnown RBP10.71□□□□□ -0.7
CRNKL1-201ENST00000377327 KDM4AO75164 1064 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 STK3Q13188 491 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 BLOC1S2Q6QNY1 142 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 CWC27Q6UX04 472 aaKnown RBP10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 ANKRD20A12PQ8NF67 263 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 LTV1Q96GA3 475 aaPredicted RBP10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 TRIM29Q14134 588 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 FAM200AQ8TCP9 573 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 RUFY1Q96T51 708 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 IL1RAPL2Q9NP60 686 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 SH2B1Q9NRF2 756 aaPredicted RBP10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 CCDC9Q9Y3X0 531 aaKnown RBP10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 SCAF11Q99590 1463 aaKnown RBP10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 STK38Q15208 465 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 AFAP1Q8N556 730 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 UHRF1BP1Q6BDS2 1440 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 SKIDA1Q1XH10 827 aa10.7□□□□□ -0.7
CRNKL1-201ENST00000377327 POLR3AO14802 1390 aaPredicted RBP10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 URI1O94763 535 aaPredicted RBP10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 CAVIN2O95810 425 aa10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 ZSCAN22P10073 491 aaPredicted RBP10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 U2AF2P26368 475 aaKnown RBP eCLIP10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 SMTNL1A8MU46 457 aa10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 RDXP35241 583 aaKnown RBP10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 DMRT2Q9Y5R5 561 aa10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 CCDC171Q6TFL3 1326 aa10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 NUTM2FA1L443 756 aa10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 RASSF8Q8NHQ8 419 aa10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 USP26Q9BXU7 913 aa10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 ANO10Q9NW15 660 aa10.69□□□□□ -0.7
CRNKL1-201ENST00000377327 ERBB4Q15303 1308 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 RIOK3O14730 519 aaKnown RBP10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 GABPB1Q06547 395 aaPredicted RBP10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 DMTNQ08495 405 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 TEFQ10587 303 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 UTP14CQ5TAP6 766 aaKnown RBP10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 NGDNQ8NEJ9 315 aaKnown RBP10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 TSC1Q92574 1164 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 CNPY2Q9Y2B0 182 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 ZNF397Q8NF99 534 aaPredicted RBP10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 NESP48681 1621 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 CBFA2T2O43439 604 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 USP8P40818 1118 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 GSDMDP57764 484 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 ANAPC15P60006 121 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 LRRFIP1Q32MZ4 808 aaKnown RBP10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 CCDC141Q6ZP82 1450 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 USP19O94966 1318 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 NEXNQ0ZGT2 675 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 INTS4Q96HW7 963 aaKnown RBP10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 TMEM63CQ9P1W3 806 aa10.68□□□□□ -0.7
CRNKL1-201ENST00000377327 THOC2Q8NI27 1593 aaKnown RBP10.67□□□□□ -0.7
CRNKL1-201ENST00000377327 ARHGAP5Q13017 1502 aa10.67□□□□□ -0.7
CRNKL1-201ENST00000377327 CUL7Q14999 1698 aa10.67□□□□□ -0.7
CRNKL1-201ENST00000377327 SNW1Q13573 536 aaKnown RBP10.67□□□□□ -0.7
CRNKL1-201ENST00000377327 AXDND1Q5T1B0 1012 aaPredicted RBP10.67□□□□□ -0.7
CRNKL1-201ENST00000377327 TTLL5Q6EMB2 1281 aa10.67□□□□□ -0.7
CRNKL1-201ENST00000377327 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
CRNKL1-201ENST00000377327 ARHGEF12Q9NZN5 1544 aa10.67□□□□□ -0.7
CRNKL1-201ENST00000377327 C17orf53Q8N3J3 647 aaPredicted RBP10.67□□□□□ -0.7
CRNKL1-201ENST00000377327 LARP6Q9BRS8 491 aaKnown RBP10.67□□□□□ -0.7
CRNKL1-201ENST00000377327 CTAGE5O15320 804 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 PTGS1P23219 599 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 TXLNBQ8N3L3 684 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 CCDC102AQ96A19 550 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 ZSCAN12O43309 604 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 SKILP12757 684 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 GJB2P29033 226 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 SULT6B1Q6IMI4 303 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 TOMM22Q9NS69 142 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 TFIP11Q9UBB9 837 aaKnown RBP10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 SLU7O95391 586 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms