RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 IQSEC2Q5JU85 1478 aa18.62■□□□□ 0.57
UBA1-202ENST00000377269 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
UBA1-202ENST00000377269 RRP9O43818 475 aaKnown RBP18.62■□□□□ 0.57
UBA1-202ENST00000377269 VSIG10Q8N0Z9 540 aa18.62■□□□□ 0.57
UBA1-202ENST00000377269 CRYBG1Q9Y4K1 1723 aa18.62■□□□□ 0.57
UBA1-202ENST00000377269 C20orf194Q5TEA3 1177 aa18.61■□□□□ 0.57
UBA1-202ENST00000377269 WWC1Q8IX03 1113 aa18.61■□□□□ 0.57
UBA1-202ENST00000377269 SPINK5Q9NQ38 1064 aaPredicted RBP18.61■□□□□ 0.57
UBA1-202ENST00000377269 CPDO75976 1380 aa18.61■□□□□ 0.57
UBA1-202ENST00000377269 ERBB3P21860 1342 aa18.6■□□□□ 0.57
UBA1-202ENST00000377269 FAM83GA6ND36 823 aa18.6■□□□□ 0.57
UBA1-202ENST00000377269 RIPK4P57078 832 aa18.59■□□□□ 0.57
UBA1-202ENST00000377269 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
UBA1-202ENST00000377269 RGPD1P0DJD0 1748 aa18.59■□□□□ 0.57
UBA1-202ENST00000377269 CLCN1P35523 988 aa18.59■□□□□ 0.57
UBA1-202ENST00000377269 COL16A1Q07092 1604 aaPredicted RBP18.58■□□□□ 0.57
UBA1-202ENST00000377269 KDRP35968 1356 aa18.58■□□□□ 0.57
UBA1-202ENST00000377269 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.57
UBA1-202ENST00000377269 PHLPP1O60346 1717 aa18.58■□□□□ 0.56
UBA1-202ENST00000377269 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
UBA1-202ENST00000377269 HSP90AA2PQ14568 343 aaPredicted RBP18.57■□□□□ 0.56
UBA1-202ENST00000377269 NUTM2BA6NNL0 878 aaPredicted RBP18.57■□□□□ 0.56
UBA1-202ENST00000377269 NUTM2EB1AL46 878 aaPredicted RBP18.57■□□□□ 0.56
UBA1-202ENST00000377269 NUTM2AQ8IVF1 878 aaPredicted RBP18.57■□□□□ 0.56
UBA1-202ENST00000377269 ADAMTS2O95450 1211 aa18.56■□□□□ 0.56
UBA1-202ENST00000377269 CSB-PGBD3P0DP91 1061 aa18.56■□□□□ 0.56
UBA1-202ENST00000377269 NFE2L2Q16236 605 aa18.56■□□□□ 0.56
UBA1-202ENST00000377269 NLRP2Q9NX02 1062 aa18.56■□□□□ 0.56
UBA1-202ENST00000377269 GOLGA2Q08379 1002 aa18.56■□□□□ 0.56
UBA1-202ENST00000377269 THUMPD2Q9BTF0 503 aaKnown RBP18.55■□□□□ 0.56
UBA1-202ENST00000377269 COL18A1P39060 1754 aa18.55■□□□□ 0.56
UBA1-202ENST00000377269 RGPD5Q99666 1765 aa18.55■□□□□ 0.56
UBA1-202ENST00000377269 MTHFSDQ2M296 383 aaKnown RBP18.55■□□□□ 0.56
UBA1-202ENST00000377269 HSP90AA1P07900 732 aaKnown RBP18.54■□□□□ 0.56
UBA1-202ENST00000377269 CAMTA1Q9Y6Y1 1673 aa18.54■□□□□ 0.56
UBA1-202ENST00000377269 ABCA3Q99758 1704 aa18.54■□□□□ 0.56
UBA1-202ENST00000377269 NAP1L5Q96NT1 182 aaPredicted RBP18.54■□□□□ 0.56
UBA1-202ENST00000377269 DCTN1Q14203 1278 aa18.53■□□□□ 0.56
UBA1-202ENST00000377269 CCDC27Q2M243 656 aa18.53■□□□□ 0.56
UBA1-202ENST00000377269 STRN4Q9NRL3 753 aa18.53■□□□□ 0.56
UBA1-202ENST00000377269 HSPA1LP34931 641 aa18.52■□□□□ 0.56
UBA1-202ENST00000377269 RGPD2P0DJD1 1756 aa18.52■□□□□ 0.56
UBA1-202ENST00000377269 FSD2A1L4K1 749 aa18.52■□□□□ 0.56
UBA1-202ENST00000377269 NGEFQ8N5V2 710 aa18.52■□□□□ 0.56
UBA1-202ENST00000377269 XRCC6P12956 609 aaKnown RBP eCLIP18.51■□□□□ 0.55
UBA1-202ENST00000377269 SLFN5Q08AF3 891 aa18.51■□□□□ 0.55
UBA1-202ENST00000377269 BTG4Q9NY30 223 aa18.51■□□□□ 0.55
UBA1-202ENST00000377269 BECN1Q14457 450 aa18.51■□□□□ 0.55
UBA1-202ENST00000377269 DUSP27Q5VZP5 1158 aa18.51■□□□□ 0.55
UBA1-202ENST00000377269 ANTXR1Q9H6X2 564 aa18.5■□□□□ 0.55
UBA1-202ENST00000377269 RGS3P49796 1198 aa18.5■□□□□ 0.55
UBA1-202ENST00000377269 LARP1Q6PKG0 1096 aaKnown RBP18.5■□□□□ 0.55
UBA1-202ENST00000377269 COL5A2P05997 1499 aaPredicted RBP18.49■□□□□ 0.55
UBA1-202ENST00000377269 TOM1L2Q6ZVM7 507 aa18.49■□□□□ 0.55
UBA1-202ENST00000377269 COL22A1Q8NFW1 1626 aaPredicted RBP18.48■□□□□ 0.55
UBA1-202ENST00000377269 EVA1CP58658 441 aa18.48■□□□□ 0.55
UBA1-202ENST00000377269 MCM10Q7L590 875 aa18.48■□□□□ 0.55
UBA1-202ENST00000377269 WDR63Q8IWG1 891 aa18.48■□□□□ 0.55
UBA1-202ENST00000377269 WDR17Q8IZU2 1322 aa18.48■□□□□ 0.55
UBA1-202ENST00000377269 TRMT2AQ8IZ69 625 aaKnown RBP18.47■□□□□ 0.55
UBA1-202ENST00000377269 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.47■□□□□ 0.55
UBA1-202ENST00000377269 LMO7Q8WWI1 1683 aa18.47■□□□□ 0.55
UBA1-202ENST00000377269 NCAPD2Q15021 1401 aa18.47■□□□□ 0.55
UBA1-202ENST00000377269 GOLGA6L3A6NEY3 463 aa18.47■□□□□ 0.55
UBA1-202ENST00000377269 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
UBA1-202ENST00000377269 E9PSI1 815 aa18.46■□□□□ 0.55
UBA1-202ENST00000377269 TSR2Q969E8 191 aaKnown RBP18.46■□□□□ 0.55
UBA1-202ENST00000377269 JCADQ9P266 1359 aa18.46■□□□□ 0.55
UBA1-202ENST00000377269 ABCC6O95255 1503 aa18.45■□□□□ 0.54
UBA1-202ENST00000377269 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
UBA1-202ENST00000377269 RAPGEF4Q8WZA2 1011 aa18.44■□□□□ 0.54
UBA1-202ENST00000377269 SLKQ9H2G2 1235 aaPredicted RBP18.43■□□□□ 0.54
UBA1-202ENST00000377269 VIRMAQ69YN4 1812 aaKnown RBP18.43■□□□□ 0.54
UBA1-202ENST00000377269 MEGF6O75095 1541 aa18.43■□□□□ 0.54
UBA1-202ENST00000377269 ZNF530Q6P9A1 599 aaPredicted RBP18.42■□□□□ 0.54
UBA1-202ENST00000377269 GNAT3A8MTJ3 354 aa18.41■□□□□ 0.54
UBA1-202ENST00000377269 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
UBA1-202ENST00000377269 PLEKHO1Q53GL0 409 aaPredicted RBP18.41■□□□□ 0.54
UBA1-202ENST00000377269 C8orf37Q96NL8 207 aa18.41■□□□□ 0.54
UBA1-202ENST00000377269 CARD10Q9BWT7 1032 aa18.41■□□□□ 0.54
UBA1-202ENST00000377269 IL17REQ8NFR9 667 aa18.41■□□□□ 0.54
UBA1-202ENST00000377269 FAM208AQ9UK61 1670 aaKnown RBP18.4■□□□□ 0.54
UBA1-202ENST00000377269 TATP17735 454 aaPredicted RBP18.4■□□□□ 0.54
UBA1-202ENST00000377269 RTF1Q92541 710 aaKnown RBP18.4■□□□□ 0.54
UBA1-202ENST00000377269 PANK2Q9BZ23 570 aa18.4■□□□□ 0.54
UBA1-202ENST00000377269 DLG5Q8TDM6 1919 aa18.4■□□□□ 0.54
UBA1-202ENST00000377269 SEC24BO95487 1268 aa18.4■□□□□ 0.54
UBA1-202ENST00000377269 MIS18AQ9NYP9 233 aa18.4■□□□□ 0.54
UBA1-202ENST00000377269 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
UBA1-202ENST00000377269 AMOTQ4VCS5 1084 aa18.39■□□□□ 0.53
UBA1-202ENST00000377269 MPRIPQ6WCQ1 1025 aa18.39■□□□□ 0.53
UBA1-202ENST00000377269 MYH16Q9H6N6 1097 aa18.39■□□□□ 0.53
UBA1-202ENST00000377269 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
UBA1-202ENST00000377269 IL16Q14005 1332 aa18.38■□□□□ 0.53
UBA1-202ENST00000377269 LRP6O75581 1613 aa18.38■□□□□ 0.53
UBA1-202ENST00000377269 MRE11P49959 708 aa18.38■□□□□ 0.53
UBA1-202ENST00000377269 NGLY1Q96IV0 654 aa18.38■□□□□ 0.53
UBA1-202ENST00000377269 CRB1P82279 1406 aa18.37■□□□□ 0.53
UBA1-202ENST00000377269 COL14A1Q05707 1796 aaKnown RBP18.37■□□□□ 0.53
UBA1-202ENST00000377269 MBIPQ9NS73 344 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms