RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 AXIN2Q9Y2T1 843 aa16.57■□□□□ 0.24
TRIM40-206ENST00000376724 TCERG1O14776 1098 aaKnown RBP16.57■□□□□ 0.24
TRIM40-206ENST00000376724 ALDH1L2Q3SY69 923 aa16.57■□□□□ 0.24
TRIM40-206ENST00000376724 DZIP1LQ8IYY4 767 aaKnown RBP16.57■□□□□ 0.24
TRIM40-206ENST00000376724 ANKRD24Q8TF21 1146 aa16.57■□□□□ 0.24
TRIM40-206ENST00000376724 MIS18AQ9NYP9 233 aa16.57■□□□□ 0.24
TRIM40-206ENST00000376724 MED1Q15648 1581 aaPredicted RBP16.56■□□□□ 0.24
TRIM40-206ENST00000376724 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
TRIM40-206ENST00000376724 CHL1O00533 1208 aa16.55■□□□□ 0.24
TRIM40-206ENST00000376724 TRIM27P14373 513 aa16.55■□□□□ 0.24
TRIM40-206ENST00000376724 KRT24Q2M2I5 525 aa16.55■□□□□ 0.24
TRIM40-206ENST00000376724 ATF7IPQ6VMQ6 1270 aa16.55■□□□□ 0.24
TRIM40-206ENST00000376724 TNS3Q68CZ2 1445 aa16.55■□□□□ 0.24
TRIM40-206ENST00000376724 PHRF1Q9P1Y6 1649 aaKnown RBP16.54■□□□□ 0.24
TRIM40-206ENST00000376724 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
TRIM40-206ENST00000376724 SPATA31A3Q5VYP0 1347 aa16.54■□□□□ 0.24
TRIM40-206ENST00000376724 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
TRIM40-206ENST00000376724 CRB1P82279 1406 aa16.54■□□□□ 0.24
TRIM40-206ENST00000376724 PXDNQ92626 1479 aa16.54■□□□□ 0.24
TRIM40-206ENST00000376724 RGPD2P0DJD1 1756 aa16.54■□□□□ 0.24
TRIM40-206ENST00000376724 MS4A1P11836 297 aa16.53■□□□□ 0.24
TRIM40-206ENST00000376724 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
TRIM40-206ENST00000376724 IPO8O15397 1037 aaKnown RBP16.53■□□□□ 0.24
TRIM40-206ENST00000376724 MVPQ14764 893 aaKnown RBP16.53■□□□□ 0.24
TRIM40-206ENST00000376724 CENPQQ7L2Z9 268 aaPredicted RBP16.53■□□□□ 0.24
TRIM40-206ENST00000376724 TSPYL4Q9UJ04 414 aa16.53■□□□□ 0.24
TRIM40-206ENST00000376724 SKAP1Q86WV1 359 aa16.52■□□□□ 0.24
TRIM40-206ENST00000376724 MAP3K5Q99683 1374 aa16.52■□□□□ 0.23
TRIM40-206ENST00000376724 HTATSF1O43719 755 aaKnown RBP16.52■□□□□ 0.23
TRIM40-206ENST00000376724 ITPRIPQ8IWB1 547 aa16.52■□□□□ 0.23
TRIM40-206ENST00000376724 MRPL50Q8N5N7 158 aaKnown RBP16.52■□□□□ 0.23
TRIM40-206ENST00000376724 RBM19Q9Y4C8 960 aaKnown RBP16.52■□□□□ 0.23
TRIM40-206ENST00000376724 CHRNA2Q15822 529 aa16.51■□□□□ 0.23
TRIM40-206ENST00000376724 IL17REQ8NFR9 667 aa16.5■□□□□ 0.23
TRIM40-206ENST00000376724 RGPD5Q99666 1765 aa16.49■□□□□ 0.23
TRIM40-206ENST00000376724 IGHDP01880 384 aa16.49■□□□□ 0.23
TRIM40-206ENST00000376724 TMEM57Q8N5G2 664 aa16.49■□□□□ 0.23
TRIM40-206ENST00000376724 ERBB3P21860 1342 aa16.49■□□□□ 0.23
TRIM40-206ENST00000376724 BRPF1P55201 1214 aaPredicted RBP16.48■□□□□ 0.23
TRIM40-206ENST00000376724 PLEKHO1Q53GL0 409 aaPredicted RBP16.48■□□□□ 0.23
TRIM40-206ENST00000376724 NLRP2Q9NX02 1062 aa16.48■□□□□ 0.23
TRIM40-206ENST00000376724 CSB-PGBD3P0DP91 1061 aa16.47■□□□□ 0.23
TRIM40-206ENST00000376724 ZNF530Q6P9A1 599 aaPredicted RBP16.47■□□□□ 0.23
TRIM40-206ENST00000376724 AAMPQ13685 434 aa16.46■□□□□ 0.23
TRIM40-206ENST00000376724 DDX19BQ9UMR2 479 aa16.46■□□□□ 0.23
TRIM40-206ENST00000376724 PCDHB15Q9Y5E8 787 aa16.46■□□□□ 0.23
TRIM40-206ENST00000376724 KIAA0232Q92628 1395 aa16.46■□□□□ 0.23
TRIM40-206ENST00000376724 SOS2Q07890 1332 aaPredicted RBP16.46■□□□□ 0.23
TRIM40-206ENST00000376724 HAP1P54257 671 aaPredicted RBP16.46■□□□□ 0.23
TRIM40-206ENST00000376724 LGR6Q9HBX8 967 aa16.46■□□□□ 0.23
TRIM40-206ENST00000376724 TAF7Q15545 349 aaPredicted RBP16.45■□□□□ 0.22
TRIM40-206ENST00000376724 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
TRIM40-206ENST00000376724 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
TRIM40-206ENST00000376724 AKAP4Q5JQC9 854 aa16.44■□□□□ 0.22
TRIM40-206ENST00000376724 C1orf141Q5JVX7 400 aa16.44■□□□□ 0.22
TRIM40-206ENST00000376724 MPRIPQ6WCQ1 1025 aa16.44■□□□□ 0.22
TRIM40-206ENST00000376724 LRRC37A3O60309 1634 aa16.44■□□□□ 0.22
TRIM40-206ENST00000376724 NCAPD2Q15021 1401 aa16.43■□□□□ 0.22
TRIM40-206ENST00000376724 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
TRIM40-206ENST00000376724 PRDM11Q9NQV5 511 aa16.42■□□□□ 0.22
TRIM40-206ENST00000376724 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
TRIM40-206ENST00000376724 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
TRIM40-206ENST00000376724 COL18A1P39060 1754 aa16.41■□□□□ 0.22
TRIM40-206ENST00000376724 RGS3P49796 1198 aa16.41■□□□□ 0.22
TRIM40-206ENST00000376724 TEFQ10587 303 aa16.41■□□□□ 0.22
TRIM40-206ENST00000376724 API5Q9BZZ5 524 aaKnown RBP16.41■□□□□ 0.22
TRIM40-206ENST00000376724 CPDO75976 1380 aa16.41■□□□□ 0.22
TRIM40-206ENST00000376724 CEMIPQ8WUJ3 1361 aa16.41■□□□□ 0.22
TRIM40-206ENST00000376724 CAMTA1Q9Y6Y1 1673 aa16.41■□□□□ 0.22
TRIM40-206ENST00000376724 NECTIN2Q92692 538 aa16.4■□□□□ 0.22
TRIM40-206ENST00000376724 RWDD1Q9H446 243 aaPredicted RBP16.4■□□□□ 0.22
TRIM40-206ENST00000376724 ZBTB40Q9NUA8 1239 aa16.4■□□□□ 0.22
TRIM40-206ENST00000376724 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
TRIM40-206ENST00000376724 TATP17735 454 aaPredicted RBP16.39■□□□□ 0.21
TRIM40-206ENST00000376724 BABAM1Q9NWV8 329 aa16.39■□□□□ 0.21
TRIM40-206ENST00000376724 ABCC4O15439 1325 aa16.39■□□□□ 0.21
TRIM40-206ENST00000376724 LMO7Q8WWI1 1683 aa16.38■□□□□ 0.21
TRIM40-206ENST00000376724 BTBD11A6QL63 1104 aa16.37■□□□□ 0.21
TRIM40-206ENST00000376724 STK31Q9BXU1 1019 aa16.37■□□□□ 0.21
TRIM40-206ENST00000376724 ZBTB7BO15156 539 aaPredicted RBP16.36■□□□□ 0.21
TRIM40-206ENST00000376724 KCNQ3O43525 872 aa16.36■□□□□ 0.21
TRIM40-206ENST00000376724 G2E3Q7L622 706 aa16.36■□□□□ 0.21
TRIM40-206ENST00000376724 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
TRIM40-206ENST00000376724 C1orf115Q9H7X2 142 aa16.36■□□□□ 0.21
TRIM40-206ENST00000376724 MEGF6O75095 1541 aa16.36■□□□□ 0.21
TRIM40-206ENST00000376724 NHSL1Q5SYE7 1610 aa16.35■□□□□ 0.21
TRIM40-206ENST00000376724 TOM1L2Q6ZVM7 507 aa16.35■□□□□ 0.21
TRIM40-206ENST00000376724 SPG7Q9UQ90 795 aa16.35■□□□□ 0.21
TRIM40-206ENST00000376724 FAM208AQ9UK61 1670 aaKnown RBP16.35■□□□□ 0.21
TRIM40-206ENST00000376724 PTPRCP08575 1304 aa16.35■□□□□ 0.21
TRIM40-206ENST00000376724 PDE4AP27815 886 aa16.35■□□□□ 0.21
TRIM40-206ENST00000376724 ABCC6O95255 1503 aa16.35■□□□□ 0.21
TRIM40-206ENST00000376724 EIF4A1P60842 406 aaKnown RBP16.34■□□□□ 0.21
TRIM40-206ENST00000376724 CHMP4BQ9H444 224 aaKnown RBP16.34■□□□□ 0.21
TRIM40-206ENST00000376724 STRN4Q9NRL3 753 aa16.34■□□□□ 0.21
TRIM40-206ENST00000376724 EIF2S2P20042 333 aaKnown RBP16.33■□□□□ 0.21
TRIM40-206ENST00000376724 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
TRIM40-206ENST00000376724 PDZRN3Q9UPQ7 1066 aa16.33■□□□□ 0.2
TRIM40-206ENST00000376724 RGS12O14924 1447 aa16.33■□□□□ 0.2
TRIM40-206ENST00000376724 WDR17Q8IZU2 1322 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms