RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 TNS2Q63HR2 1409 aa29.12■■■□□ 2.25
XPA-201ENST00000375128 U2AF1L5P0DN76 240 aaPredicted RBP29.11■■■□□ 2.25
XPA-201ENST00000375128 U2AF1Q01081 240 aaKnown RBP eCLIP29.11■■■□□ 2.25
XPA-201ENST00000375128 DIEXFQ68CQ4 756 aaKnown RBP29.11■■■□□ 2.25
XPA-201ENST00000375128 ZCRB1Q8TBF4 217 aaKnown RBP29.11■■■□□ 2.25
XPA-201ENST00000375128 KDRP35968 1356 aa29.1■■■□□ 2.25
XPA-201ENST00000375128 DDX54Q8TDD1 881 aaKnown RBP29.09■■■□□ 2.25
XPA-201ENST00000375128 MARCH10Q8NA82 808 aaPredicted RBP29.08■■■□□ 2.25
XPA-201ENST00000375128 SPG7Q9UQ90 795 aa29.06■■■□□ 2.24
XPA-201ENST00000375128 CCDC184Q52MB2 194 aa29.03■■■□□ 2.24
XPA-201ENST00000375128 PLEKHO1Q53GL0 409 aaPredicted RBP29.03■■■□□ 2.24
XPA-201ENST00000375128 PKD1L3Q7Z443 1732 aa29.03■■■□□ 2.24
XPA-201ENST00000375128 SHANK3Q9BYB0 1731 aa29.03■■■□□ 2.24
XPA-201ENST00000375128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.03■■■□□ 2.241e-6■■■■□ 23.1
XPA-201ENST00000375128 PCDH11XQ9BZA7 1347 aa29.02■■■□□ 2.24
XPA-201ENST00000375128 PCDH11YQ9BZA8 1340 aa29.02■■■□□ 2.24
XPA-201ENST00000375128 WDR43Q15061 677 aaKnown RBP eCLIP29.02■■■□□ 2.24
XPA-201ENST00000375128 FAM196AQ6ZSG2 479 aa29.02■■■□□ 2.24
XPA-201ENST00000375128 PRKAR2BP31323 418 aa29.01■■■□□ 2.23
XPA-201ENST00000375128 AMOTQ4VCS5 1084 aa29.01■■■□□ 2.23
XPA-201ENST00000375128 RSPH6AQ9H0K4 717 aa29.01■■■□□ 2.23
XPA-201ENST00000375128 MRS2Q9HD23 443 aa29.01■■■□□ 2.23
XPA-201ENST00000375128 FCHSD2O94868 740 aa29■■■□□ 2.23
XPA-201ENST00000375128 PLEKHG2Q9H7P9 1386 aa28.99■■■□□ 2.23
XPA-201ENST00000375128 CYP27B1O15528 508 aa28.97■■■□□ 2.23
XPA-201ENST00000375128 KAT6BQ8WYB5 2073 aa28.97■■■□□ 2.23
XPA-201ENST00000375128 ZNF530Q6P9A1 599 aaPredicted RBP28.96■■■□□ 2.23
XPA-201ENST00000375128 IFNL2Q8IZJ0 200 aa28.96■■■□□ 2.23
XPA-201ENST00000375128 PNNQ9H307 717 aaKnown RBP28.94■■■□□ 2.22
XPA-201ENST00000375128 NEFMP07197 916 aa28.94■■■□□ 2.22
XPA-201ENST00000375128 PHKG2P15735 406 aa28.94■■■□□ 2.22
XPA-201ENST00000375128 MTHFSDQ2M296 383 aaKnown RBP28.94■■■□□ 2.22
XPA-201ENST00000375128 C1orf141Q5JVX7 400 aa28.93■■■□□ 2.22
XPA-201ENST00000375128 ACSBG1Q96GR2 724 aa28.93■■■□□ 2.22
XPA-201ENST00000375128 PHACTR3Q96KR7 559 aa28.93■■■□□ 2.22
XPA-201ENST00000375128 ADAMTS8Q9UP79 889 aa28.92■■■□□ 2.22
XPA-201ENST00000375128 SBF2Q86WG5 1849 aa28.91■■■□□ 2.22
XPA-201ENST00000375128 TRIM37O94972 964 aa28.91■■■□□ 2.22
XPA-201ENST00000375128 BCL9O00512 1426 aa28.9■■■□□ 2.22
XPA-201ENST00000375128 GAS2L2Q8NHY3 880 aa28.89■■■□□ 2.22
XPA-201ENST00000375128 UPF1Q92900 1129 aaKnown RBP eCLIP28.89■■■□□ 2.22
XPA-201ENST00000375128 PLEKHF1Q96S99 279 aa28.88■■■□□ 2.21
XPA-201ENST00000375128 MAPK8IP3Q9UPT6 1336 aa28.88■■■□□ 2.21
XPA-201ENST00000375128 NKX1-1Q15270 411 aaPredicted RBP28.87■■■□□ 2.21
XPA-201ENST00000375128 AKAP4Q5JQC9 854 aa28.87■■■□□ 2.21
XPA-201ENST00000375128 PNISRQ8TF01 805 aaKnown RBP28.87■■■□□ 2.21
XPA-201ENST00000375128 DOT1LQ8TEK3 1739 aa28.87■■■□□ 2.21
XPA-201ENST00000375128 HSP90AB1P08238 724 aaKnown RBP28.86■■■□□ 2.21
XPA-201ENST00000375128 SF3B2Q13435 895 aaKnown RBP28.86■■■□□ 2.21
XPA-201ENST00000375128 CCDC146Q8IYE0 955 aa28.86■■■□□ 2.21
XPA-201ENST00000375128 MIER1Q8N108 512 aa28.86■■■□□ 2.21
XPA-201ENST00000375128 SYTL4Q96C24 671 aaPredicted RBP28.86■■■□□ 2.21
XPA-201ENST00000375128 SOCS7O14512 581 aa28.86■■■□□ 2.21
XPA-201ENST00000375128 KCNQ2O43526 872 aa28.86■■■□□ 2.21
XPA-201ENST00000375128 MPRIPQ6WCQ1 1025 aa28.85■■■□□ 2.21
XPA-201ENST00000375128 CCDC125Q86Z20 511 aa28.85■■■□□ 2.21
XPA-201ENST00000375128 PRIM1P49642 420 aaKnown RBP28.84■■■□□ 2.21
XPA-201ENST00000375128 CCER2I3L3R5 266 aa28.83■■■□□ 2.21
XPA-201ENST00000375128 PTF1AQ7RTS3 328 aa28.83■■■□□ 2.21
XPA-201ENST00000375128 DCAF5Q96JK2 942 aa28.83■■■□□ 2.21
XPA-201ENST00000375128 BCL11BQ9C0K0 894 aaPredicted RBP28.83■■■□□ 2.21
XPA-201ENST00000375128 EP400Q96L91 3159 aa28.82■■■□□ 2.2
XPA-201ENST00000375128 NHSQ6T4R5 1651 aa28.82■■■□□ 2.2
XPA-201ENST00000375128 FAM9BQ8IZU0 186 aa28.81■■■□□ 2.2
XPA-201ENST00000375128 RUNDC1Q96C34 613 aa28.81■■■□□ 2.2
XPA-201ENST00000375128 GNAT3A8MTJ3 354 aa28.8■■■□□ 2.2
XPA-201ENST00000375128 TOGARAM1Q9Y4F4 1720 aa28.8■■■□□ 2.2
XPA-201ENST00000375128 TNS1Q9HBL0 1735 aaKnown RBP28.79■■■□□ 2.2
XPA-201ENST00000375128 APBA3O96018 575 aa28.79■■■□□ 2.2
XPA-201ENST00000375128 MAP3K5Q99683 1374 aa28.79■■■□□ 2.2
XPA-201ENST00000375128 KDM6AO15550 1401 aaPredicted RBP28.78■■■□□ 2.2
XPA-201ENST00000375128 ITGB4P16144 1822 aa28.78■■■□□ 2.2
XPA-201ENST00000375128 VIRMAQ69YN4 1812 aaKnown RBP28.78■■■□□ 2.2
XPA-201ENST00000375128 NFE2L2Q16236 605 aa28.77■■■□□ 2.2
XPA-201ENST00000375128 LGR6Q9HBX8 967 aa28.77■■■□□ 2.2
XPA-201ENST00000375128 SCN11AQ9UI33 1791 aa28.76■■■□□ 2.19
XPA-201ENST00000375128 RNMTO43148 476 aaKnown RBP28.76■■■□□ 2.19
XPA-201ENST00000375128 RTF1Q92541 710 aaKnown RBP28.76■■■□□ 2.19
XPA-201ENST00000375128 DLG5Q8TDM6 1919 aa28.75■■■□□ 2.19
XPA-201ENST00000375128 ERVV-2B6SEH9 535 aa28.75■■■□□ 2.19
XPA-201ENST00000375128 BTAF1O14981 1849 aa28.75■■■□□ 2.19
XPA-201ENST00000375128 BAG6P46379 1132 aa28.75■■■□□ 2.19
XPA-201ENST00000375128 CABP4P57796 275 aa28.75■■■□□ 2.19
XPA-201ENST00000375128 TMOD3Q9NYL9 352 aa28.75■■■□□ 2.19
XPA-201ENST00000375128 DEFB132Q7Z7B7 95 aa28.74■■■□□ 2.19
XPA-201ENST00000375128 NEUROD2Q15784 382 aa28.73■■■□□ 2.19
XPA-201ENST00000375128 RRP7AQ9Y3A4 280 aaKnown RBP28.73■■■□□ 2.19
XPA-201ENST00000375128 TMPOP42166 694 aaKnown RBP28.72■■■□□ 2.19
XPA-201ENST00000375128 RIPK4P57078 832 aa28.72■■■□□ 2.19
XPA-201ENST00000375128 IL17REQ8NFR9 667 aa28.72■■■□□ 2.19
XPA-201ENST00000375128 EN1Q05925 392 aaPredicted RBP28.71■■■□□ 2.19
XPA-201ENST00000375128 PIGBQ92521 554 aa28.71■■■□□ 2.19
XPA-201ENST00000375128 NFATC2IPQ8NCF5 419 aa28.7■■■□□ 2.19
XPA-201ENST00000375128 APAF1O14727 1248 aa28.69■■■□□ 2.18
XPA-201ENST00000375128 HTATSF1O43719 755 aaKnown RBP28.69■■■□□ 2.18
XPA-201ENST00000375128 DCTN1Q14203 1278 aa28.69■■■□□ 2.18
XPA-201ENST00000375128 MCM10Q7L590 875 aa28.69■■■□□ 2.18
XPA-201ENST00000375128 ADAMTS7Q9UKP4 1686 aa28.69■■■□□ 2.18
XPA-201ENST00000375128 SLC52A2Q9HAB3 445 aa28.68■■■□□ 2.18
XPA-201ENST00000375128 PLSCR1O15162 318 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms